Rana temporaria (common frog): 120929688
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Entry
120929688 CDS
T07929
Symbol
TBC1D4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120929688 (TBC1D4)
Membrane trafficking [BR:
rtem04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120929688 (TBC1D4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120929688 (TBC1D4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
120929688 (TBC1D4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF4249
Microvir_J
PTB
KH_PARP14_8
WHD_MCM8
Motif
Other DBs
NCBI-GeneID:
120929688
NCBI-ProteinID:
XP_040197310
LinkDB
All DBs
Position
2:complement(168643817..168842767)
Genome browser
AA seq
1272 aa
AA seq
DB search
MERRSSADQCHPLLEEQPVPDRTTKGDKKFRLWYVGWSSLDRRTTLPMLPWLVAEIRRRA
ERQEPPGFVAPCREVQLLLVAPHLRCVPALNGNTAVFIFEHKAQHIARFIHNTQDPSYFA
YLIKSQPDNPESEMTCHVFKATDPSQVSTVISSIRQVSKVALQEDSKVSRDGEDAFYNSQ
KFEVLYCGKVVIAYKNAPSTLVDDCIEKFSQHERQRLRLLSEQRSIDSSSDLALAETDVP
VSPTDSTFQEQDSEPNANSASRNHSGIFTVGSQSNLGSIRVSFPESILEDSGFEDQQEFR
SRCSSVTIQKKAYDGKIQSRRRHASAPSHVQPSDSEKNRTMLFQVGRFEINLISPDSKTA
VLEKNFKDISSCSQGIQHIDHFGIVCRECVEPGISQYICYVFQCATEALVDEIMLTLKQA
FSTAAALQNAKTQIKLCEACPMHALHKLCERIEGLYPPRAKLVIQRQLSLLSDNEQADIF
ERVQKMKATSDQEENELVILHLRQLCETKQKTHVHIGEMQSSASNSSLSENTAPSGRFKL
DILKNKAKKSLTSSLENIFSRGANRVRGRLGSMDSFERNSFASDKDGSPGDSPPTTPPSS
PVSSSWQSFPEEDPDSPQFRRRAHTFSHPPSSTKRRITFPDVKSPNSRSPLQRQHSLACD
GTQSSPIPILRRVRTESEPSFSSLPSSFTAPSFLKNLYQGSGRTPPQSERDAPKSESEGR
KRTISSCSNDSLNASGTSLIPRRISWRQQIFLRVASPMITSPSDMQHKDHLDVNDLLPLS
PLPPTMEEDPLASLLQDESSTESADGKRNSEDLQRLWRKAIHQQILLIRMEKENLKLEEA
SRDELQSRKIKLDYDEVGLCQKEVSNLWDKKLNCRTKIRFDMEEIYATLKEGVSKSKRGE
VWQFLSVQYRLRHRLPTKQQSPDTTYTDLLKQLTAQQHAILVDLGRTFPTHQYFSTQLGA
GQLSLYNLLKAYSLLDQEVGYCQGISFVAGVLLLHMSEQQSFQMLKFLMYDLGFRKQYRP
DMISLQVQMYQLSRLLHDYHRDLYDHLEENDISPSLYAAPWFLTLFASQFPLGFVARVFD
IIFVQGTEVIFKVAICLLGNNKEQIMACDNFESVVDFLKINIPDMTKDTMENVITQVFEM
DISKQLHAYEVEYHVINDEMLEASNSCDDAESFHKLEKANNQLKRQNMDLLEKLQVAHTK
IQNLETNVETILSRESKIKNLIRSLEQDKSAYQRAVEQMKKYVPAHVLTDCELLLKDLNC
SPNNKTKTGSKQ
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggagaggagaagttcagcagaccagtgtcaccccctgttggaggagcaaccagtcccc
gataggacgaccaaaggggataagaaattccgcctgtggtacgttgggtggtcatctctg
gaccgtaggacgactttgcccatgctgccatggctagtggcagaaattcgcagaagggcc
gaaagacaggagccccccggtttcgtggccccttgtcgcgaggtgcagttgttgctagtg
gccccgcaccttcgttgtgtgccagccttgaatggcaacacggcggtctttatcttcgaa
cacaaagcacagcacatcgctcgcttcatccacaacacccaagacccctcttactttgcc
tacttgattaaatctcagcctgataacccagagtctgagatgacctgtcacgtcttcaag
gctactgaccccagtcaggtgtctacggtcatcagtagcattagacaagtgtctaaagtt
gcactgcaggaagattccaaggttagccgtgatggtgaagatgccttttataattcccaa
aagtttgaggttttatactgtgggaaagtggtcattgcttataagaatgctccctctact
ctcgttgatgactgcattgagaagttctctcaacacgaacggcagcgcctgagactgctt
agtgagcagcgcagtatagactccagctctgaccttgctttggccgagaccgatgtccca
gtgtctccaactgatagtacatttcaggagcaggactctgagcccaatgccaattctgcc
tccaggaaccattcagggatatttacagtaggtagccagagcaatcttggttctatacgg
gtatcatttcctgagagcattctagaagactcaggctttgaggaccagcaggagttcagg
tctagatgtagcagtgtcactattcagaaaaaagcttatgatggaaagatacagtcaaga
agacgacatgcaagtgcgccaagccatgtccagccatcagattccgaaaagaacaggaca
atgctctttcaggttggaaggtttgaaatcaatcttataagtcctgattccaaaacggcg
gtgctggaaaagaacttcaaagatatctcgtcgtgttctcagggtattcaacatattgat
cactttggtattgtctgtcgtgaatgtgtggaaccgggaataagccagtatatttgttac
gtcttccagtgtgccactgaagcattggtggatgaaatcatgctgacattgaagcaagct
ttcagcactgctgctgccctccaaaatgccaagactcaaatcaagttatgcgaggcctgt
cctatgcatgctctgcacaagctgtgtgagcgaatcgaagggctgtatcctccaagagcc
aaactggtaatacagagacaactgtctttgctgtcagacaacgaacaagctgacattttt
gaacgtgtccagaaaatgaaagctacaagcgaccaggaggagaatgaacttgtcatactt
catctaagacagttatgtgagaccaagcagaaaacccatgttcatattggcgagatgcag
tcgagtgcatcaaacagctccctctcggagaacactgcccccagtggccgcttcaagttg
gatattctcaagaataaagccaagaaatctctgaccagctctctggaaaatattttctca
aggggtgcaaatcgagtgagaggacgactgggcagcatggatagttttgaacgtaacagt
tttgcatctgacaaggacggctctcctggggattctcctccgaccaccccaccgtcttct
cctgtgtcatcgtcctggcaatcatttccagaggaagacccagactccccccagtttcgc
agacgggctcatacatttagccacccgccatcgagtaccaagcggaggataacctttcct
gatgtaaagtcaccaaacagcagatccccccttcaaaggcagcactcactagcctgtgat
gggacacaaagcagccccattcctattcttcggcgtgtccgcactgagagtgaaccttcg
ttttccagtctcccctcatccttcactgccccttctttcctgaaaaatctttaccaaggt
tcagggagaactcccccccaatctgagagagatgctcccaagagtgaaagtgaaggaagg
aagagaacgatttcttcttgtagtaacgactctttaaacgctagcggaacatccctcata
ccacgacgaatttcgtggcgccagcagattttcctcagggtagcttcaccaatgatcacc
tccccctcagatatgcaacataaagatcatttagatgtgaacgatttgctgcctttatcc
ccccttcctcctaccatggaagaggacccactagcatctcttcttcaggatgaaagttct
acagaaagcgctgatgggaagagaaattctgaagatcttcaaaggttatggcggaaggca
atacatcaacagatcctattaatacggatggaaaaagagaacctgaaacttgaagaagca
agccgagatgaacttcagtctagaaaaattaaactggattatgatgaagttggactttgt
caaaaagaagtttcaaacctctgggataaaaagttaaactgcagaacaaaaatccggttt
gacatggaagagatatatgctacattgaaagaaggtgtttcaaaaagcaagcgtggggag
gtatggcagtttctctctgtgcagtatcgtctaaggcacagactgccaaccaaacagcag
tctccagatacaacatataccgatcttttgaaacaacttactgcccaacagcatgctatc
cttgttgaccttggaagaacgtttccaacccatcagtatttttccacacagctgggggca
ggccagttgtctttatataaccttcttaaagcatattctttgttggaccaagaagttggc
tactgtcaaggaatcagcttcgtggccggggttcttctcttacacatgagcgaacagcaa
tccttccaaatgttaaagtttcttatgtacgaccttggcttccgtaagcagtaccggcca
gatatgatatctcttcaggttcaaatgtaccaactttcccggcttcttcatgactaccac
agagacctctatgaccatctggaagagaatgatattagtccaagcctttatgctgctcca
tggtttctgacattatttgcctcacaatttccccttggatttgttgccagagttttcgat
attatttttgtccaaggaactgaagtaattttcaaagtagccatttgtcttctcggaaac
aataaagagcagatcatggcatgtgacaactttgagagtgttgtggattttctgaagatc
aatatacctgatatgacaaaggacactatggagaacgttatcacacaggtatttgaaatg
gacatttccaaacaactccatgcttatgaggttgagtatcatgtaattaatgatgagatg
ttggaagcctctaattcctgtgatgatgcagagtccttccataagctagaaaaagccaat
aatcagctaaaaaggcaaaacatggaccttctggaaaaactacaggtagctcacaccaaa
attcagaatctggaaaccaatgttgaaacaattttatctcgagaaagcaaaattaaaaac
ctgatccgctctctggagcaagacaaatcggcgtatcaaagggctgtggagcaaatgaag
aaatatgtgccagctcatgtactgacagactgtgaacttttgctaaaggatcttaactgt
agcccaaacaacaaaacaaagacaggaagtaagcaataa
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