Rana temporaria (common frog): 120929744
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Entry
120929744 CDS
T07929
Name
(RefSeq) beta-hexosaminidase subunit beta-like isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem00511
Other glycan degradation
rtem00513
Various types of N-glycan biosynthesis
rtem00520
Amino sugar and nucleotide sugar metabolism
rtem00531
Glycosaminoglycan degradation
rtem00600
Sphingolipid metabolism
rtem00603
Glycosphingolipid biosynthesis - globo and isoglobo series
rtem00604
Glycosphingolipid biosynthesis - ganglio series
rtem01100
Metabolic pathways
rtem04142
Lysosome biogenesis
Module
rtem_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
120929744
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120929744
00513 Various types of N-glycan biosynthesis
120929744
00531 Glycosaminoglycan degradation
120929744
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
120929744
00604 Glycosphingolipid biosynthesis - ganglio series
120929744
00511 Other glycan degradation
120929744
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
120929744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rtem03110
]
120929744
Enzymes [BR:
rtem01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
120929744
Chaperones and folding catalysts [BR:
rtem03110
]
Intramolecular chaperones
Others
120929744
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
120929744
NCBI-ProteinID:
XP_040197368
LinkDB
All DBs
Position
1:complement(101616728..101705078)
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AA seq
550 aa
AA seq
DB search
MEGMWILPVLCLIQTAGSYESRLYHSPEKREHLPPLGAPDPSPYGSLWPLPQEVQISPDF
MFIPPADFSIVHGERSTAGPECLVLQDAFRRYFNYIFGFLRLEDVTAGKPRAGRLVQLQV
IITSKDNECHKYPNIRSDESYKLSVNEDGAVLQASQVWGAVRGLETFSQLVYKDSNGAFV
INKTQITDFPRFAHRGLLLDTSRHYLPLKVILKTLEAMAFNKMNVFHWHIVDDPSFPYQS
EAFPELSNKGAYQASTHIYNFIDIRIVIEFARLRGIRVIPEFDTPGHTYSWGNGQKDLLT
PCYKDGEPSGSFGPVNPIVNGTYEFMYKLFEEVGSLFPDKYIHLGGDEVDFSCWKSNPDI
TKFMAEHGFGTDYCKLESYYVQQILGIMSKLGKGYMVWQEVFDNHNQINPDTVVEVWKGE
NCFEELHKVTAAGFSAILSAPWYLDYISYGQDWQRYYRVEPLNFNGTEQQKQLVIGGEAC
LWGEFVDATNLAPRLWPRASAVAERLWSSAKVTSVQDAYNRLVVHRCRMVGRGISAEPLY
VGFCENEMDY
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaagggatgtggatccttcccgtgctgtgtctgatacagaccgctggcagctatgag
tcccggctctatcattccccggagaagagggagcatttgccgccgctcggtgctccggat
ccctccccgtacggctccctgtggccgcttccccaggaggtgcaaatctcccccgacttc
atgttcatccccccggctgacttctccatagtccacggagagcgatccaccgcggggccg
gagtgcctggtgctgcaggatgccttccggagatacttcaattacatatttggtttcctg
cgattggaagatgtaactgcaggtaaaccaagggcaggacgattggtacaacttcaggtc
atcatcacctcaaaggacaacgaatgtcacaagtatcccaacatccgttcagatgagtca
tataagctgtcagttaatgaagatggagctgttcttcaagcaagtcaagtctggggtgct
gtgaggggtcttgagacgttcagccagttagtttataaagacagcaatggagcatttgta
ataaacaaaactcagattactgactttccaaggtttgcccacagaggattactactggac
acatccagacattatctgcctctaaaggttatcctaaaaactttggaagctatggcattt
aacaaaatgaatgtctttcactggcatatagtagatgatccgtctttcccttaccaaagt
gaagcattccctgaattgagtaataagggagcttatcaggcatcaacacatatttataat
ttcattgacatacgcatagtgatcgagtttgctagactaagaggaattcgggttatacca
gagtttgatactccagggcacacttactcgtggggtaatggccaaaaagatcttttgact
ccctgttacaaagatggagagccaagtggaagttttggacccgtgaacccgattgttaat
ggcacttatgagtttatgtataaattatttgaagaagttggcagcttgtttcctgacaaa
tatatccatttaggaggggatgaggtagatttctcttgctggaaatccaatcctgatatt
acaaagtttatggcggagcatggctttggtacagactactgcaaactggaatcatactat
gttcaacaaattcttggtataatgtccaaattggggaagggttacatggtttggcaggaa
gtatttgataaccataaccagattaatccagacacggtagtggaagtgtggaagggggaa
aactgtttcgaagaattgcacaaagtgacagctgcagggttttctgccatcctctcagct
ccctggtacctagattacattagttatggccaggactggcagagatactaccgagttgag
ccactaaactttaatgggaccgaacagcagaagcagcttgtaattggtggtgaagcttgt
ctatggggtgaatttgtggacgctacaaacctcgcaccacgactgtggcctagagcaagt
gcggttgcagaaagactttggagcagtgcaaaagtgacctccgtgcaggatgcttataac
aggctggttgtacataggtgtcgtatggtcgggcgtggaatatcggcagagccgctctat
gttgggttttgtgaaaatgaaatggactactag
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