Rana temporaria (common frog): 120930420
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Entry
120930420 CDS
T07929
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120930420
04121 Ubiquitin system [BR:
rtem04121
]
120930420
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120930420
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120930420
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
zf-C2H2_7th_ZNF462
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
120930420
NCBI-ProteinID:
XP_040197541
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Position
3:219340308..219342759
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AA seq
624 aa
AA seq
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MASGGTEELERPASFKSPVWDHFGFPVKYDHEEKRMVDKTMTACRHCGTRKPYDSGNTSS
MATHLKRHHPGVPLTVTGVKTKAVQQPLITAAFKQPLIPQSDRAKAITKAIGVFMGADMR
PYSIVQNEGFKHMLNVLEPRYNILSRIHFSEKVVPELYEQEKKKVLDELSQASSVALTTD
GWTSRGTESYITITAHFITADWEMRSPVLQTRPLYGSHTSAHLAQVLTEAVDEWKLKRPS
TNIPVTTDNAKNQVNAVIEAGLGPQIGCFAHVVNLASQKGISVSRMDRLLGRIRKVVSYF
HRSTTAAHVLKTKQEMLKLPKHKLINDVPTRWNSTYDMLERYLEQQAAIYSALTDKTLKK
IVKDIITLSDDDVRVAEEVLQVLQPLKMVTSLLSTESSPSVSMIMPLKTRILQSMAPGVE
DSTITQDVKTAIREDLQPRYTSPPTLQDYLHRSTALDPRFKSLSHMDPALRQRTYSDLTT
EIVSSLGTKDCDEGQAQAAEPTGANLDSSSPPQKKSAMAELFGETFASKDNKTSADIIKE
EVESYLLAASGITVDGDPMTWWKSNECKYPHVAKMARCYLAVPGSSVPSERVFSTAGDIV
TAQRSTLSPEHVDILVFLKKNLKL
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggaggaacggaggagcttgaacgccccgcgtcgtttaaatctcctgtatgg
gatcattttggcttccctgtgaaatatgatcatgaggaaaagaggatggtagataaaacc
atgacggcgtgtaggcactgtggcacaagaaagccatacgatagtggaaacacgtcaagt
atggccacgcatttgaagcgtcatcaccccggtgttccactgacagtcacaggagtgaaa
acaaaagctgttcagcaaccactcatcaccgcagcatttaaacagccccttattccacaa
tcggaccgggctaaagccattacaaaagcgatcggcgtgtttatgggtgcagatatgagg
ccatattccattgtgcagaacgagggctttaagcacatgcttaacgtgcttgagccacgt
tacaacatcctgtcgcgcatccacttcagcgaaaaggttgtgccagaactttatgaacag
gagaagaaaaaagtcttggatgaactatcccaagcatcgtctgttgcgctcacgacagac
gggtggacgtccaggggaacagagagctatataacaataaccgctcacttcatcacggca
gactgggagatgagaagtccggtgctgcagacacgccccctctacgggagtcacacaagc
gctcatcttgcgcaggtgctgacagaagcggtggacgaatggaagctaaagaggcccagt
accaatatcccagtcacaactgacaatgccaaaaaccaagttaatgccgtgattgaggca
ggactgggcccacagatagggtgttttgcacatgtcgtaaatttggcatctcaaaaggga
atctctgtcagtaggatggaccgcctccttgggaggatcaggaaggtggtttcctatttc
caccgaagcacaacagctgcccatgtgcttaaaacaaagcaagaaatgctaaagctgcct
aaacacaagctcataaatgatgtgccaaccaggtggaactccacttatgatatgctggag
cgttatctggagcagcaggcagctatatactctgcactgactgacaagaccctaaagaaa
attgtcaaggacatcattaccctgtctgatgatgatgtgagagtggcagaggaggtcctc
caggtgcttcaacccctcaagatggtaacatctcttctgagcactgaaagttcaccatct
gtatcgatgatcatgcccctaaaaacaaggattctacaatccatggctccaggtgtggaa
gacagcaccatcacacaagatgtcaagactgccattagagaggacctgcagcccagatac
acttcaccccctactctacaggactaccttcacagatctactgccctggatccaaggttc
aagtccctgtctcacatggaccctgccctacgccagaggacatacagtgacctcaccacc
gagattgtgagcagtctgggcactaaagactgtgatgagggtcaagctcaagctgcagag
ccaacaggagcaaacttggactcatcatctcctccacaaaagaagtcggcgatggcagag
ctttttggagagacctttgccagcaaagacaacaagacttctgctgacatcatcaaagag
gaggtggaatcctatctgctggcagcaagcggcattacagtggatggtgatccgatgaca
tggtggaaaagcaatgagtgtaaataccctcatgttgccaagatggcaagatgctatctc
gctgtgccaggctcttcagttccttctgagagggtgttctcaacagcaggggacatagtg
actgcacagaggtccacactctccccagagcatgtagacatccttgtctttttgaaaaag
aatttgaaattataa
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