Rana temporaria (common frog): 120931167
Help
Entry
120931167 CDS
T07929
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120931167 (CHD2)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120931167 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Myb_DNA-binding
CHDCT2
Motif
Other DBs
NCBI-GeneID:
120931167
NCBI-ProteinID:
XP_040198292
LinkDB
All DBs
Position
3:26628354..26771316
Genome browser
AA seq
1859 aa
AA seq
DB search
MSSNKEKSGEEEEGSAHSNVSSHSASEESNHSASESGSHSESEQASEQASGQASESNSSS
ESSESHSESECESAGSKTQEAAADSEKKNLPKKERLADVKKMWEEYPDVYGVRRSNRSRQ
EPSRFNIKAEGTDSESESPKRRSLRSSSKKETKKDSEDDDDDDEEENSSEDDIIERRSTR
PRRAAAKREAIFDSDSDDDDDEEEDEENSSEDDETERPKLRPRRAAARRVVSRAGGRSQK
KPQRGKRRTTESSDDDDDDDDDDTPKRQTKRRAAKTVSYKEDDDFETDSDDLIEMVGEEV
EEPEDNSETIEKVLESRIGKKGATGASTTVYATEANGDPCADFNAETDEGEQQYLIKWKG
WSYIHSTWESEESLQQQKVKGLKKLENFKKKDDEIKQWLSKVTPEDVEYYNCQQELAGEL
NKQYQIVERIIAVRTGKSAAVNPDVPVLSRRSSTSNEPEYLCKWMGLPYADSSWEDESLV
AKKFQHCIDSFHSRNNSKNTPVKDCKVLRQRPRFVTLKKQPSYIGGEALELRDYQLEGVN
WLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHFLYGPFLLVVPLSTLTSWQREFE
IWAPDINVVVYIGDLGSRNTIREYEWVHQQSKKMKFNAVLTTYEILLKDKAVLSSINWAF
IGVDEAHRLKNDDSLLYKTLIDFKSNNRLLITGTPLQNSLKELWSLLHFIMPEKFEYWED
FEDDHGKATDNGYHSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMCAQQKQYYKWIL
TRNFKALTKGPRGSTSGFLNIVMELKKCCNHCFLIKADDSERESRQDLLQSLIRSSGKLV
LLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIRHYPFQRLDGSIKGEIRKQALDHFN
AEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYR
LVTKNTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLENNSGSSNSNPFNKEELAAILKF
GAADLFKEPEGEESEPQEMDIDEILRLAETRENEPSSSATDELLSQFKVANFSTMEDEPP
LENQGQIDWDNIIPEDQRKKIEEEERQKELEEIYMLPRIRSLNKKAQANDSESDLESKQK
AQRSSGSDSETDDSDDDRKPKRRGRPRSVRKDTVEGFTDAEIRRFIKAYKKFPTPLERLE
CIAHDAELVEKSLADLKRLGDLLHSSCTSAMQEFEEQLKENPTDGKGPGKRRGPTIKISG
VQVNVKAIIQHEEDFDILSKAIPKDAEEKKKFRLSSRVKAAHFDVDWTVEEDSRLLLGIV
EHGYGNWELIKSDPELQLADKILPVETEKKPQGKHLQTRSDYLLKLLKKEVEKKESGQGD
EVKVKKRRPRAKKEGAVKAKDEHGNEITSPKNSDNHSEDGDTKEDGSLKSPSKKKQKKKD
NKENKDKQNQKKEGAKEKKKAKEKPKKGEGKSGTRSKKNQGPVHITAGNDPVPIGEEEDD
DLDQETFSVCKERMRPVKKALKQLDKPDKGLAVQEQLEHTRTCLLKIGDRISECLKTYND
QEQTKLWRRNLWIFVSKFTEFDARKLHKLYKMADKKRSQEEDVKEHKKKDGPPGKKFFRP
DPSGPSRDSLPSQQHTPEKSHNMPPHPPQMHGHQRDDFVSPNKRPFNNADRVEWRDRKFN
YGGNSNNNQPWAGDRHHQQYEQPRYKDHHYSDRRPHGDPRRNSGNYRPNPGPRKRPYDQY
NNDRDHRGHREYYDSRHHHDNKRRRSDEFRPQGYHQQDFRRMGSDHRPPMGYHGQGPSDH
YRPFHPEKPAEYKSTSQQSTTLSDPRSPPTQKPPHDSKPPMDRSLEQRSTDYNWNSRKT
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaataaagagaaatccggagaggaggaggaagggtcggctcacagcaatgta
tccagtcattcagcctcagaagagtccaatcactccgcctcggagtcaggcagccattca
gaaagcgaacaagcaagtgagcaggcaagtgggcaggccagtgaatccaatagcagctct
gagtcttcagagagtcattctgaatcagaatgcgaatcagcaggctccaaaacccaggaa
gcagcagccgactcagagaagaagaatcttcccaaaaaggagagactggcggatgtaaaa
aagatgtgggaggaataccccgatgtatatggagtcaggaggtccaaccggagtagacaa
gaaccttcaaggtttaatattaaagccgagggcacagattctgaaagtgaaagcccaaag
cggagaagtctcagatcctccagcaagaaagagacaaaaaaagattctgaggatgatgat
gacgacgatgaggaagaaaatagcagtgaagatgatataatagaaagacgttcaactcga
cctcggagggctgcggcaaaaagagaggcaatattcgattctgattctgatgatgatgat
gatgaggaggaagatgaagaaaatagcagtgaagacgatgaaacagagagacctaagctt
agaccacggagggctgcagcaagaagagttgtgtccagggctggtgggaggagccagaaa
aagccacagcgcggtaagaggaggacaaccgaatcgtcagatgacgatgatgacgacgac
gatgacgatacgcctaaaaggcagacaaaacgcagagcagccaaaaccgttagctacaaa
gaggacgatgattttgaaacggattctgatgatctgatagaaatggtgggagaagaggta
gaagaaccagaagataacagtgaaacaatagagaaagtattggagtccagaattggaaag
aaaggagcaactggcgcctcaacaactgtatatgccacggaagccaatggagatccatgt
gccgactttaacgcagaaacagatgaaggagagcaacagtatcttatcaaatggaaaggc
tggtcttacatccacagcacttgggagagtgaagagtccctccagcagcagaaggtgaaa
ggcctaaagaagctggagaactttaagaagaaggatgatgaaatcaagcaatggctatca
aaagtcacccctgaagatgtcgagtattataactgccagcaggaactagcaggagaactg
aataagcagtatcagattgttgagaggatcatagccgtgaggactggtaaatccgccgct
gtaaatcctgacgttccagtcctcagccggagaagctccacctccaatgaaccagagtac
ctgtgcaagtggatgggtctcccctatgccgattccagctgggaagatgaatcgctcgtt
gcaaagaaattccagcactgcattgacagcttccacagccgtaacaactccaaaaacact
ccagtgaaagactgcaaggtcctgagacaaagaccccggtttgtgacattgaaaaaacag
ccttcttatattggaggtgaagcgctcgagctccgggactatcagctagagggtgtaaac
tggctggctcactcgtggtgcaagaacaacagtgttatccttgctgatgagatgggctta
ggaaagactattcagaccatttccttcctctcgtacctctttcaccagcattttctttat
ggcccatttctgttggtggtgccattatctacattgacttcgtggcaacgagaatttgaa
atatgggctcctgacattaatgtggttgtttatataggagatcttgggagcagaaacacg
atccgagagtatgaatgggttcatcagcagagcaagaaaatgaaatttaatgcagtactg
acaacctatgaaattttactgaaggacaaggctgtgttgagcagtattaattgggctttt
atcggcgtcgacgaagctcatcggttgaagaatgacgattctttgctgtataaaaccctt
atagacttcaaatccaacaaccgactgctgatcactgggacaccgctccagaattcactg
aaggaactatggtcactgctgcacttcattatgccagaaaagtttgagtattgggaggac
tttgaggacgaccatggcaaagcgacagataatggttaccacagccttcacaaggtcctt
gaaccgtttctactgcgcagagtcaagaaggatgtcgagaaatctcttccagctaaagtg
gagcaaatcctgcgggtggagatgtgtgctcaacagaaacagtattacaagtggatttta
accagaaacttcaaggcgctgacgaaaggcccaaggggcagcacatctggtttccttaac
attgtaatggaactgaagaagtgctgcaatcactgcttcctcattaaggccgatgattca
gaaagagaaagcagacaagatttactgcagtctctgatcagaagcagtggaaagcttgtt
ctgctggacaaactgttgacacgactgcgtgagagaggaaaccgcgtgctcatcttttct
cagatggtgcgcatgttggacatcttggcagagtacctcaccattaggcactacccgttt
cagagacttgatggttcaatcaagggagagattcgtaagcaagcgctggatcactttaat
gctgaaggctcggaggatttttgtttcttgctctctacacgtgccggtgggcttgggata
aacttggcgtctgctgacaccgtagtcatcttcgattcggactggaacccccagaatgac
ttgcaagcccaggctagagctcacaggattggccaaaagaaacaggtaaacatttatcgc
ctggtcaccaagaacactgtagaggaagagatcatagaacgggcaaagaaaaagatggtt
cttgaccatctcgtgatccagcgcatggacaccactgggcgcacggtgctggagaacaac
tctggaagttcaaattccaatccatttaacaaagaggagttggcggcgattttaaagttt
ggagcagcggatctctttaaggaaccagaaggagaggaatcagaaccccaggaaatggac
attgatgagattttacgactggcagaaactagagagaatgagccaagctccagtgccacc
gatgagttgctgtctcagtttaaggtggcaaatttttcaactatggaagatgagcctcca
ctggagaaccaaggccagatagattgggacaatattattcctgaggaccaaaggaagaag
atagaggaagaggagcgtcagaaagaacttgaagagatctacatgcttcccaggattcga
agcttgaacaaaaaggcacaagcaaatgacagcgagtctgacctggaatcaaagcagaag
gctcagaggtcctctgggtcggacagtgaaaccgatgactccgacgatgatagaaaaccc
aagcgcagaggacgtcctcgtagtgttcggaaagacacagtggagggattcacagatgca
gagatacgaaggtttatcaaagcctacaagaagtttccgactccacttgaaaggttggaa
tgcattgcacatgatgcagagctcgtggaaaagtcgttggcagatctgaagagactggga
gatttattgcactctagctgcacatcagcaatgcaagagtttgaggagcagctgaaagag
aatcccaccgatgggaaaggtccgggcaaaagaagaggtccaactataaaaatttccggt
gtccaagtaaacgtgaaagcaattattcagcatgaagaagactttgacattctcagcaaa
gccattcccaaagatgcagaggaaaagaaaaagttcagattgtccagtcgggtcaaagct
gctcattttgatgtggattggactgtagaagaagattctcgattgctcctgggaattgtc
gaacacggttatggaaactgggagctcatcaaaagcgacccagagttacagttggctgat
aagatcttgccagttgaaacggagaagaagccacaagggaaacacttgcagaccagatca
gactatctgctaaaactgctgaaaaaagaagtggagaaaaaggagagtggccagggtgat
gaggtcaaggtaaagaaaagacggccacgtgccaagaaagagggggctgtaaaagcgaag
gatgagcacggcaatgaaatcacttcccccaaaaattccgacaaccattcagaagatgga
gacacaaaggaggatggctcgctgaagagtccaagcaagaaaaagcaaaagaaaaaagat
aacaaagaaaataaagataaacagaaccaaaaaaaggaaggagccaaagaaaagaagaaa
gcaaaagaaaagccaaagaaaggtgaaggcaagtctggtacccggagcaaaaagaaccag
ggaccggtccatattacagcaggaaatgacccagttcctattggagaggaagaggacgat
gacctggaccaggaaaccttcagcgtgtgcaaggagaggatgaggccggtgaaaaaagct
ctgaagcagctggataaacctgacaaaggtctggccgtccaggagcagctggagcacact
cggacctgcttgctaaaaatcggagaccgcatatctgagtgccttaaaacttacaatgac
caggaacaaaccaagttgtggagaagaaacctctggatatttgtctcaaaattcaccgag
tttgatgccaggaagttgcacaagttgtacaaaatggccgataaaaagagatcccaggaa
gaagatgtaaaggagcataagaagaaggatgggcctcctggcaagaagttttttcgacca
gatccatctgggcccagccgtgactctctcccttcacagcaacacaccccagagaagtct
cataatatgccaccacatccaccacaaatgcatgggcaccaaagagacgactttgtcagc
cctaataaaagaccatttaataatgcagatcgtgttgaatggagagatcgaaaatttaac
tacggaggcaatagtaataataaccagccgtgggcaggagaccgccaccatcaacaatat
gagcaaccccggtataaagatcaccattattctgatcgacgtcctcatggtgaccctcgg
aggaattctggaaactacaggccgaaccccggaccccgcaagaggccttatgatcagtat
aacaatgaccgagaccatcgtggtcacagggaatattatgacagtagacatcatcatgac
aacaagaggagaagatcagatgaatttcgtcctcaaggttaccatcagcaggatttcaga
agaatgggatctgatcaccgcccaccaatgggatatcatggacaaggaccttcagatcat
taccgtccattccatccagaaaaacctgcggaatataaaagtacttcccagcagtccact
actctctcagatcctcgttctccgccaactcaaaagccccctcacgattccaaacccccc
atggacagatcattagaacagagaagtacggactacaattggaacagtcgaaaaacatag
DBGET
integrated database retrieval system
