Rana temporaria (common frog): 120931271
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Entry
120931271 CDS
T07929
Symbol
IL16
Name
(RefSeq) pro-interleukin-16 isoform X1
KO
K22628
interleukin 16
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120931271 (IL16)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rtem04052
]
120931271 (IL16)
Cytokines and neuropeptides [BR:
rtem04052
]
Cytokines
Interleukins
120931271 (IL16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120931271
NCBI-ProteinID:
XP_040198483
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All DBs
Position
3:49495958..49690548
Genome browser
AA seq
1299 aa
AA seq
DB search
MPNKYGCERGSILKSSLKMDRQNSTGKKIKKGKNFRSISKSLILCNTKNSDDGSSLEEKY
SEITEISQCGVQDWESPFSGIPQNDNMIPEPTSKKMVLSRSASNDKSMNKSSLKEAALNA
FVESQAKLESHSILQMKVPCVRTRSNSTTSSAKKHILYIIKSVNPYWIGEIDAPASKKPL
LFRDRQPPNLCSDRKSLSQQLDSPSGIVQGVSRSSRSLSSAHLANTRVSSQVSVISNIIL
MKGQGKGLGFSIVGGKDSIYGPVGIYVKTIFPDGAAAADGRLQEGDEILELNGESMYGLT
HNDALQKFKQVKKGVLTLTVRTGLSPPDFKGCNSQMVRSKSSSTCAMRDHSPLHPESPSA
LFSSKPNDRVLIEVSLQKESGVGLGIGLCSVPNCGGISGIFIHTLSPGSVAHMDGRLRKG
DELVEVNEHTVTNKPLNEVYALLSHCNPGAVIILISRHPDPQVSEQQLTQAMAEAMEKEF
PHWNSEGDRKMASCCHGKYQCESCIEKHAAYLYYSRREQRQMVRSSSDSNYNPRTMGLNP
DSCQLYGLKGRVHSVDVPVRTEPIQTHYSAPVKLGDYSPTASDALTSTQVLCKKTSSHTG
EIIVRKLTSKPAPPPRKYYKQDTKDDEAGNLILKGNQQLTAHSVLDTSLSSADSSHTTTA
DQISPDSGSSVASHHKPLLRRQARVDYSFDTTPEDPWVRISDCIKNLFSPIITEDHNLMD
MDGNISTGEDSSSSTQTEQRHQQTYGGDSSSQTGESEDITILKKGPPVAPKPTWFRQSLK
GTKNVNRSWDNSGSDKHKEPSYISRPQVSTRTSSIKQRISSFETFSSQQPVTKVNNRPCS
QSPVQHEKTVYKEIEVECVTVSFNKVSVNSVESKVEKVLEPQMVSPEPVDNTEVRVSCSP
PKINVLNARRSSSTSNEPQLYSSYTEFTEPLTYKTPSQRSRSYPLSSNISADTTKKSENC
SKIYSISNQVSSALMKSLLAFPQSPLPQSKDLWQTETTATEESPCSSFTENHLLDTGFSV
NLSELKGYGTSQPDKEKEETIGEQSIFLPSSTATNSQSVISLLPIQELSQLIEEVQALDE
ETLKEFDDIHVVVLHKEENAGLGFSLAGGLDLENKAITVHRVFPSGLTSQEGTIQKGDKV
LSINGKSLKGVTHNEALGILREARLPRQAVIVIKKEKDGEQSSSSSDCTGTDEHTTGNMD
VGGFIMSVTLEKSLAGLGFSLDGGKGSIHGDKPIVINRIFKGVSDKNDAVQPGDELLQLG
NISLQGLTRFEAWTAIKTLPSGPVQAVIRRSSNAGLVNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgccaaacaaatatggttgtgagagagggagcattcttaagtcctctctgaagatggac
agacagaacagcacaggaaaaaaaatcaagaaaggcaaaaacttccgttccatatccaag
tcacttattctgtgcaacactaagaacagcgatgatgggtccagcctggaggagaaatat
tctgaaatcactgagatatcacaatgcggtgtgcaagactgggaatcacctttttctggc
attccacaaaatgataacatgataccagagcctacaagtaagaaaatggttttatcgaga
agcgcctctaatgacaaaagtatgaacaaatcatctcttaaggaagcagctctgaatgca
tttgtggaaagtcaagctaaactggaaagccattccatactgcaaatgaaggttccatgt
gtgaggacaaggagcaactcaacaacttcatctgctaaaaagcacatactatacataata
aagagtgtaaacccgtactggattggtgaaatcgatgcacctgcaagtaagaagccttta
ctgttcagagaccgacaaccccccaatttgtgcagcgaccgaaagtctttgtctcagcaa
ttagacagtccttcaggaattgtacagggtgtttcccgttcttcaaggtcattgagttct
gcacacctagcaaacacgagagtatcttcacaagtgtctgttatttccaatattatttta
atgaaaggccaaggcaagggacttggattcagtattgttggtgggaaggacagcatttat
ggaccagttggcatttatgtgaagacaatatttccagatggagcagctgcagctgatgga
agactgcaagaaggggatgaaattctagaactaaatggagagtcgatgtacggcttaaca
cataacgatgcactgcaaaaatttaagcaagtgaagaaaggagttctgaccctaacagtc
cggactggactcagccctccagattttaaaggatgcaattctcagatggtccgatctaaa
agctccagcacctgtgccatgagagatcatagccctcttcaccccgagagtccttcagct
ttattcagctccaagcccaatgacagagtcctgattgaggtgtcattacaaaaagagtcc
ggtgttggtctgggaatcggattgtgcagtgttccaaactgtggaggcatttctgggata
tttatccatactctttcccccggctcggtggcccacatggatggaaggctcagaaaaggc
gatgaacttgtggaagtaaacgaacacactgtaaccaacaagccactgaatgaagtctat
gctcttctaagccactgtaaccctggagcagtcattatcctgattagtagacacccagac
ccccaggtctctgagcagcagctgacgcaagctatggctgaagctatggaaaaagaattt
ccacactggaattcggaaggtgataggaagatggcctcgtgctgccatgggaaatatcaa
tgtgaaagctgcatcgagaagcatgctgcatacctgtattacagccggagggagcagagg
caaatggttcgatccagcagtgacagcaactataatcccaggacaatgggcctgaaccca
gactcctgccaactgtacggtctgaagggtagagtgcacagtgtggacgtgcctgtgcga
acagagcccatacagactcattactctgctcctgtaaagttgggagattattcacctact
gccagtgatgctttaacctcaactcaggtcctctgtaagaaaactagtagccacacagga
gagatcatcgttaggaagttaacttcgaaaccagctcccccacctaggaaatattataag
caagacacaaaggatgatgaagcaggaaatttgattctaaagggaaaccagcaattgaca
gcccacagtgtgctagatacatccttatcttctgctgactcttcacatacaacaactgct
gatcagatatctccagactcaggaagttctgttgcgtctcatcacaaaccattgttaaga
agacaggcacgcgttgactacagctttgatacaactcctgaagacccgtgggttagaatt
tctgattgtattaaaaacttgttcagccccatcataactgaagaccataaccttatggac
atggatggaaatataagcacaggggaggatagctcctcctctacacaaacagaacaaagg
caccagcaaacttatggtggtgattccagttctcagacaggtgaaagtgaagatataacg
atcctgaaaaaaggtcctcctgtggcacccaagccaacctggtttcgtcagagtttaaaa
ggaaccaagaatgtaaatcgctcctgggacaatagtggttctgataaacacaaagaaccc
agttacatttctagaccacaggtttcaacccgaacatcatcaatcaagcaaagaataagt
tcatttgaaacttttagtagccaacaaccggtaacaaaagtgaacaatagaccttgctct
cagtctccagtgcaacatgaaaaaacggtttataaggaaattgaagtagaatgtgttact
gtgtctttcaacaaggtctcagtgaactcagttgaaagtaaagttgaaaaagttctcgaa
cctcaaatggtatctccagaacctgtggacaatacagaagtcagagtttcctgctctcca
ccaaagatcaatgtattaaatgctagaagaagcagcagtaccagtaatgagccacagctc
tactcttcatatacagagttcactgagcccctaacatacaagactccaagccaaagatca
aggagctacccactttcctccaatatatcagctgatactacaaagaaaagtgaaaactgc
agcaaaatatactctattagcaaccaagtgtcctctgctctgatgaaatccttgttggct
ttccctcagtctccacttccgcaaagcaaagacttatggcagactgagaccactgcgaca
gaggaaagcccctgcagctccttcactgaaaaccacctgctggacactggattctctgta
aacctctctgagttaaagggctatggaacaagccagccagataaagagaaggaagagacc
atcggtgagcagtccatctttctgccttcatctacagccactaacagccaatccgtcata
tctctacttcccattcaagaactgagccaactaatagaggaagttcaagctctagatgaa
gaaacacttaaggaatttgatgacattcatgtggtggtcttgcacaaggaagagaatgct
ggcttaggctttagccttgctggaggacttgatctggaaaacaaggcaattactgtccac
agagtgttccccagtggtctcacctctcaagaaggaaccattcaaaaaggagacaaagtt
ttgtccatcaatggaaagtcactgaaaggtgtcactcataatgaggcactggggatttta
cgtgaggcacgtctacctagacaggctgttatagtgataaagaaagaaaaggatggtgaa
cagagttccagctcatcagactgtacaggaactgatgaacatacaactggaaatatggac
gtggggggcttcataatgtctgtaactctggagaagtctttggctggtttgggattcagc
ttagatggaggaaaaggttccatacatggagacaagccaattgtcatcaacagaatattt
aaaggtgtgtcagacaagaatgatgccgttcagcctggagatgaattgctgcagttggga
aatatttctttgcaaggtctcactcgctttgaggcgtggactgccattaaaactttaccc
agtgggccagttcaggctgttattagaaggagcagcaatgctggcttagtcaatcaatag
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integrated database retrieval system