Rana temporaria (common frog): 120931276
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Entry
120931276 CDS
T07929
Symbol
TMC3
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
120931276 (TMC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtem02000
]
120931276 (TMC3)
03037 Cilium and associated proteins [BR:
rtem03037
]
120931276 (TMC3)
Transporters [BR:
rtem02000
]
Other transporters
Pores ion channels [TC:
1
]
120931276 (TMC3)
Cilium and associated proteins [BR:
rtem03037
]
Other cilia and associated proteins
Stereociliary proteins
120931276 (TMC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
120931276
NCBI-ProteinID:
XP_040198488
LinkDB
All DBs
Position
3:complement(49815411..49924869)
Genome browser
AA seq
1100 aa
AA seq
DB search
MTTVSVSAALKPTKSTKRYKSVRRNTSIFQVPPQSISDDENAEGKEENNDPETIFQNIQM
QKELVADIRCRPWPMRQKLRSLKQAKEIVLKYEGRLTRTRGYQAAGAELWKKFLRLAYNF
VVLFVPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTILTGAFVVLPEILAGAPFGS
TVNKKIPDKEFPSAQDLNTIWSLGGYLQYSVLFYGYYGRERKIGSAGYRLPLAYFLVGMA
VFAYSFITLLRKMAKNSRLSLASASDENYTFCWRIFCAWDYLIGNSEAAESKTAAIVNSI
REAILEEQEKRKSNNLAVTISLRILANILVLLSLAGSIYIIYFVVDRSQKLERTKIELSL
WEKNEVSVVVSLITMIAPSAFELVAALEMYHPRTTLRFQLARVLVLYLGNLYSLIIALLD
KVNIMSNSSNDTFGNPVPLYATTIPVLTTVSPSYGMDRNSTFAIEMDQNITKIMVAINQT
SSPVMSEVPMNKNECWETYVGQEMLKLSIIDMIFTVASILLIDFFRGLIVRYMSDCCCWD
LESKFPEYGEFKIAENVLHLVYNQGMIWMGAFFSPCLPAFNVFKLIGLMYLRSWAVLTCN
VPHQQVFRASRSNNFYLAMLLFMLFLCMLPTVFAIVRYKPSINCGPFSGQEKIYDIIAET
IENDFPAWFNKVMSYVSSPVVVVPALLLLFMLIYYLQSIARSLKFTNNQLRAQIQTERME
DKKKVFQMAVARFLHKEVPEKKRDPESDIISQESSVHSSTPRKNGSVVNFESPGSKRSQI
QTISQSAPRVVVPHPPNVSPSPSGSRVKPQRTEHVSNRPPSIKQGISNDICRTKNYHSAG
PKKQAEDALSEPLFRKGLRHITPERHGSSAPSILPHRPHARYYIVNEHESRKKLLRSTSR
LPRHFRMEESGDIVELYPRNVRKYVVQPPRRSQSPHLSEEEEDEIRRDLIRRSNRPRSLS
DLRHNPRFYIGDRNDGQMMSGRDLARMQYKSWEGGFQIDSEKAHHRKKINLKNFDLDEQF
VERHRKVKSKHKLEPCLTESDSMSNASSSDQQNSSTDQYIQVIHNKDKYIKSGGKLTKKK
SKASVDLNASPLNELICSNV
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgacaacggtgagtgtgtctgccgcactaaaacctacaaagtcaactaaaagatataaa
agtgtcaggaggaataccagcatcttccaagtccctccacagagcatttcagatgatgaa
aatgcagaaggaaaagaggagaacaatgacccagaaacaatcttccagaatattcagatg
caaaaggaacttgttgcggatattagatgtagaccttggccaatgcgacaaaagctacgc
tcgctcaaacaggctaaagagattgtgttgaagtatgaaggacggctaaccagaacacga
ggctaccaggcagctggagcagagctttggaaaaaattccttcgcctggcctacaacttt
gttgtcctgtttgttccttgggagatgagaataaagaagatagaaagtcactttggatca
ggtgttgcttcatactttatatttttacgatggttattcggcattaacatcgtcctcaca
atactgactggagcttttgttgtattgccagagatccttgctggagctccatttggaagc
actgttaacaagaaaatccctgacaaggagttcccatcagcacaggacctgaacaccatc
tggtcacttgggggttatctccaatactctgtactattttatggctactatggcagagaa
aggaaaattggaagcgctggataccgtctgccgctggcgtactttcttgttgggatggca
gtctttgcctacagtttcatcacactgttaagaaaaatggcaaagaactctaggctgagc
ttggcaagtgcatcggatgagaactataccttctgttggagaatcttctgtgcatgggac
tatctcattgggaattcagaagctgccgaaagtaaaactgctgccatagttaacagcatt
agagaagccattttagaagaacaggagaaaagaaaaagcaataatttggcagttacaata
agtctgagaattctagcaaacattttagttttgctctcgctggcaggaagcatttatatt
atttattttgtggtggacagatcacagaagctcgaacgcacaaaaatagaactatccctt
tgggaaaaaaatgaggtaagtgtagtggtttccctaatcactatgattgctccatcagca
tttgagctggtagcagccttggaaatgtatcatcctagaacaacattacgcttccagctg
gcaagggtccttgtattgtacttggggaacctgtacagtttgattattgcactgctggac
aaagttaatatcatgagtaacagtagcaatgacaccttcgggaatccagtcccactttat
gccacgacaatccctgtactaaccacagtcagccctagttatggaatggatagaaattcc
acttttgcaatagagatggatcagaacattacaaaaatcatggttgccatcaaccagaca
tcatccccggttatgtctgaggttccaatgaataaaaatgagtgctgggaaacctatgtt
ggacaggagatgctgaaactttccataattgatatgattttcacagtggcaagtatcctc
cttattgacttctttcgtggccttattgtccggtatatgagtgattgctgctgctgggat
ctagaaagcaaatttccagaatacggggaattcaaaattgctgagaatgttcttcatctg
gtctacaatcaaggaatgatttggatgggggcatttttctctccgtgtcttccagcattt
aatgtgtttaaactgataggcttgatgtatttaagaagctgggcagtgctgacctgcaat
gttccacatcagcaggttttcagagcttcaaggtctaacaacttctacttggctatgctg
ctgttcatgcttttcctgtgcatgctgccaactgtttttgctatagtaagatataagcca
tccataaactgtggaccatttagtggacaagagaaaatttatgacatcattgctgaaacc
attgaaaatgactttcctgcctggttcaacaaggtgatgagctatgtcagcagtccagtg
gtggtcgttccggccttacttcttctctttatgttaatctattaccttcagagcattgca
agatccctaaaattcaccaataatcagctgagagcacagatccagactgaaagaatggaa
gacaagaaaaaggtctttcaaatggctgtggcccgattcctgcataaggaagtacctgaa
aaaaagcgggatccagagagtgacatcatcagccaagagtcttctgtgcattcatccact
ccccggaagaacggaagcgtggtgaactttgaatccccaggcagcaagcgcagccagata
caaactatctcccaatcagctcctcgtgtggttgtgccacatcccccaaatgttagtcca
agcccttccgggtctagggtgaaaccgcaaaggacagagcatgtttcaaacagacctccc
agtataaagcaaggaatctccaatgatatctgcagaaccaagaactaccattcagcaggg
ccaaagaaacaagctgaggatgccctatcagagccacttttcaggaaaggcctgagacat
attacacctgaacgccatgggtccagtgcaccaagtattctccctcatcgaccacacgca
agatattatatagtcaatgaacatgaatctcgtaagaaactcctccgttccacatcacga
ctgccaagacatttccgaatggaagagtctggtgatatagtagagttatatccaagaaat
gtcagaaagtatgttgttcaaccaccacgtcgctcacagtcaccgcacctgagtgaggag
gaggaagatgaaattcgcagggatttaatccgcagatctaaccgccctcgctcactatcg
gatctccggcataatcctcggttttacattggagaccgtaatgatggtcaaatgatgtct
gggcgagatctagcacgcatgcaatataaatcctgggaaggaggctttcagattgactcg
gaaaaggcacaccatcgcaaaaaaataaatctgaaaaactttgaccttgatgaacagttt
gtggaacgtcaccggaaagtcaagtcaaagcacaaacttgaaccatgtcttacagaatcg
gactcgatgtccaacgcatccagcagtgaccagcaaaacagcagcaccgaccagtacatc
caggtcattcataataaggacaaatacatcaaaagtggtggaaagttaaccaagaaaaaa
tcaaaagccagtgtggacttaaatgcctctcccttgaatgaattaatttgttcaaatgtc
tag
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