Rana temporaria (common frog): 120931354
Help
Entry
120931354 CDS
T07929
Symbol
MYO5A
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120931354 (MYO5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120931354 (MYO5A)
04131 Membrane trafficking [BR:
rtem04131
]
120931354 (MYO5A)
03029 Mitochondrial biogenesis [BR:
rtem03029
]
120931354 (MYO5A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtem04812
]
120931354 (MYO5A)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120931354 (MYO5A)
mRNA cycle factors
P-body specific factors
120931354 (MYO5A)
Membrane trafficking [BR:
rtem04131
]
Others
Actin-binding proteins
Myosins
120931354 (MYO5A)
Mitochondrial biogenesis [BR:
rtem03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120931354 (MYO5A)
Cytoskeleton proteins [BR:
rtem04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120931354 (MYO5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
HTH_17
DUF6212
NPHP3_N
DUF5382
Motif
Other DBs
NCBI-GeneID:
120931354
NCBI-ProteinID:
XP_040198629
LinkDB
All DBs
Position
3:complement(66342672..66584635)
Genome browser
AA seq
1879 aa
AA seq
DB search
MENFLDYAYVNLARVWIPDPEEVWKSAEIRKDYKPGDTVLHLHLEEGTDLEYRLDAKTKG
LPPLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPI
YGADIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMR
YFATVSGSDSEANIEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDKRYRIVGAH
MRTYLLEKSRVVFQAEEERNYHVFYQLCASASLPEFNLLKLGSANSFHYTKQGRSPVIDG
VDDAKELRNTRRACSLLGIGDQYQLGIFRILASILHFGNVEIKSRDADSCIISPKHEPLI
IFCDLMGVEYEEMSHWLCHRKLVTATETFIKPLNRLQATNARDALSKHIYANLFNWIVCH
VNKALLSSAKQNSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNLHVFKLEQEEYM
KEQIPWTLIDFYDNQPCINLIESKMGILDLLDEECKMPKGSDNTWAQKLYNTHLKTCPLF
EKPRLSNVAFIIKHFADKVEYQCEGFLEKNKDTVFEEQVKILKASKKFKLLTELFQEDEQ
STSPTTVTTSGRTLLSRTGLRKPKPDQKSKEHKKTVGHQFRNSLHLLMETLNATTPHYVR
CIKPNDFKYPFTFDSKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQRDI
LSDWRQTCKNVLEKLILDQDKYQFGKTKIFFRAGQVAYLEKIRADKLRVACIRIQKTIRS
WLLRKKYLRMKKAAINIQRYVRGYQARCLAQFLRRTRAAILIQKFQRMYVVRKRYIHIQS
ITLRLQTYLRGYAARKRFEQMVRIHKATIIQKHVRGWLARVSYKRSMEALLYIQCCYRRM
MARRELKKLKIEARSVEHYKKLNFGMENKIMQLQRKVDEQHKDNKSLQERLTHLEITYSN
EKDKLRSDVDRLKHIEEEAKNSANRLVTLQDELARLRKELHQTQTEKKTIEEHADKYRKE
TEKLVSELKEQNALLKTEKDELNIRIQEQAKRMTEDMEKKLLQETKELEHELNDERSRYQ
NLLNEFSRLEERYDDLKEDMSSMTVPKPGHKRTDSTHSSNESEYTFSSEITDLEDLAFRN
EEPIDKKALDMSLFLKLQKRVKELEHEKQILQDDLDKKEEQLNKSKSQQEAKSPIRGTEL
EYESLKRQELESENKKLKNELNELRRAVTDKASPDPSGHGGQVYKVLLEQMTSVSEELEV
RKEEVLILRSQLVSQMEAIPHKDDKNTMTDTLPISEDVQKMKDRREIAQAYTGMKETNRT
LPQDFHMLNEDGELWLVYEGLKQANRVLESQLQTQKKSYENELEALKGEVQGLREENNRQ
QQLLAQNLQLPPEARIEASLQHEITRLTNENLYFEELYADDPMKYQSYRISLYRRIIDLM
EQLEKQDKTVRKLKKQLKVFAKKIGELEVGQMENVSPGQIVDEPIRPLNIPRKEKDFQGM
LEYKKEDEPKLIKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKVRSLLTST
INGIKKILKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEAFMKHNTTRQNDHCLTNFDLA
EYRQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSSIADE
GTYTLDSIVRQLNTFHSIMCQHGTDPELIKQVVKQMFYIIGAVTLNNLLLRKDMCSWSKG
MQIRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDEDAEAICSMCNALTT
AQIVKVLNLYTPVNEFEERVLVTFIRNIQLRLRDRKDAPQLLMDAKHIFPVTFPFNPSSL
ALETIQIPGSLSLGFIARV
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atggagaactttttagattatgcctatgtgaaccttgcacgggtgtggatcccggatccc
gaagaagtatggaagtctgccgaaatacgaaaggattataaaccgggggatacggttctg
catcttcatctagaggaaggcacggatttagaatatcgtctggatgccaagacaaagggg
ctgccaccactaagaaatccagatatccttgtcggggaaaatgaccttactgcgctcagt
taccttcatgagccggccgtcctgcataatctaaaagtgcgctttatagactccaagcta
atttacacatattgtggcatagttcttgtagcgataaacccttatgaacagttacccatc
tatggcgccgatatcatcaatgcgtacagtgggcagaacatgggggatatggacccccat
atttttgcagtggcagaagaagcatataaacaaatggccagggatgagaggaaccagtcc
atcatcgtgagtggggaatccggtgcagggaagactgtttctgccaagtatgccatgaga
tattttgccacggtcagcggctctgacagcgaggcaaacatagaagagaaagtgttggct
tctaatccaatcatggaggccatagggaatgccaagactactagaaatgataacagcagt
cgttttggaaagtacatagagattggatttgataagaggtatcggattgttggtgctcac
atgaggacatatttactagagaaatctcgtgtggtttttcaggcagaggaggagcgaaat
tatcacgtgttttatcaactgtgtgcatcagcttcattaccggaattcaaccttcttaaa
ctggggagtgccaacagtttccattacacaaagcaaggaagaagcccagtgattgatggc
gttgatgacgcaaaagaactaagaaatacacggcgagcctgttcactattaggtattggt
gaccagtaccagttgggaatctttcgaattttagcttctatacttcactttggaaacgtg
gaaattaaatctcgagatgcagacagttgtataatttctccaaagcatgaacctctgatt
atattttgtgatctaatgggagtggaatatgaagagatgtcgcactggctctgccatcgg
aagcttgtaacggccaccgagacctttatcaaaccactcaaccgactgcaagctaccaat
gctagagatgccttgtccaaacatatctacgcaaacctctttaactggattgtgtgtcac
gtcaacaaagccctactgtcatctgccaaacagaattcattcattggagtccttgatatc
tacgggtttgaaacatttgagataaacagctttgagcagttctgtatcaactatgccaat
gagaagttgcagcagcagttcaatctgcatgtgtttaagttggaacaagaggagtacatg
aaagaacaaatcccatggaccttaattgacttttatgacaaccagccctgcatcaacctc
atagaatccaaaatgggtatcctggacctacttgatgaagaatgtaagatgcccaaaggg
tcagataacacatgggcccagaaattatacaatacccacctcaagacctgcccgttgttt
gaaaaaccacgtttgtctaacgtagcttttattatcaagcactttgcagacaaggttgaa
tatcagtgcgaaggctttcttgaaaagaacaaggatacggtgtttgaagagcaagttaaa
atcttgaaagccagtaagaagtttaaattgctgactgaactgttccaagaagatgagcag
agcacaagccccacaacggtgacaacctcgggacgcacgctcttatcccgcacaggcctg
cgcaagccaaagcctgaccaaaaaagcaaggagcataagaaaacagttggccatcagttt
aggaattctctgcacctgctgatggagacactgaatgccacaaccccacactatgtgcgc
tgcatcaagccaaatgacttcaagtatccatttacgtttgactctaaacgggcagttcag
cagctgcgggcttgcggagtattagaaaccatacgcattagtgctgctggattcccttcc
aggtggacataccaagaattctttagccgatatagggtgctgatgaaacagagagacatc
cttagtgattggaggcaaacctgcaaaaatgtcctggagaagctcattttggaccaagat
aagtaccagtttggtaagacaaagatttttttccgtgccggacaagtggcctatttggag
aaaataagagcagacaaattaagagtggcctgcattcgaatccagaaaacaattcgtagc
tggctattgaggaagaagtacttgagaatgaaaaaggcagctataaacattcaaagatac
gtcagaggctaccaggcaagatgtcttgcccagttcctgcgcagaaccagagcagcaatc
ctcatacagaagttccagagaatgtatgtggttcggaaaagatatatacatatacagtca
attacacttcgtcttcagacttaccttcggggctatgcagccaggaaaagattcgaacag
atggtcaggatacacaaggcgaccatcattcagaagcatgtccgtggctggctagctcgt
gtgtcttacaagagaagcatggaagccttattatacatccaatgctgctaccgcaggatg
atggccaggagggagctgaagaagctgaaaatcgaggcacgctctgtcgaacactacaag
aaactcaactttggaatggagaacaaaatcatgcaactgcagcgtaaagttgatgaacag
cacaaggacaacaaatctttgcaggagaggctgacccacctagagatcacctacagcaat
gagaaagataagttgcgtagtgatgtggaccgccttaaacatattgaagaggaggcaaaa
aattctgctaaccggctggttactctgcaagatgaacttgctcggcttagaaaggaacta
caccagacacagaccgagaagaagaccattgaagaacatgcagataaatacaggaaggag
actgagaaactggtttctgagctgaaagagcagaatgcattattgaaaacggagaaggac
gagctgaacatccgaatccaggaacaggctaagaggatgactgaggatatggagaaaaaa
ctactgcaagaaacaaaagaactggaacatgagctgaatgatgagaggtcgaggtatcag
aatctgctcaatgagtttagtcgtttggaggagcgatatgatgacttaaaggaggacatg
agctccatgaccgttccaaaaccgggacataagaggaccgactccacccacagcagcaac
gaatcagaatacaccttcagttcagagattacggatttagaagacctagctttccgtaat
gaggaaccaattgataagaaggctctggacatgtccctgtttctcaagcttcagaaacgt
gtgaaagaactggaacatgaaaaacaaattttgcaagacgacttggataaaaaggaagaa
cagcttaacaaatccaaaagtcagcaggaggcaaagtcaccaattcgagggacagaactg
gaatatgaatctctcaagcgccaagaactggaatctgagaacaagaagctgaaaaatgag
ttaaatgagctcaggagagctgtcacagacaaggcctccccagatccctcaggacatggg
ggtcaggtctataaggtgctcttggaacagatgacatcagtcagtgaagagctggaagtg
agaaaagaagaagtactcattctgagatcgcagctagtgagccaaatggaagccattcca
cacaaggatgataagaatacaatgacagacacgttgcccatctctgaggatgttcagaag
atgaaagaccgaagggaaattgcgcaggcttatacaggcatgaaagaaaccaacagaacc
ctacctcaagacttccatatgctgaatgaggacggagagctctggctggtgtatgaaggg
ttaaaacaggccaacagagttctagagtcacagctccagactcagaagaagagctatgag
aatgagttggaagctctcaagggagaggtccagggtctacgggaggaaaacaaccgccag
caacagctacttgcccagaacctgcaactgcctcctgaggctcgaattgaagccagttta
cagcatgagattacccggctgaccaatgagaatctgtattttgaggagttatatgcagat
gatcccatgaagtatcaatcgtaccggatttcactttacagacggatcattgatctaatg
gagcaacttgagaagcaggataagacagtcaggaagctgaaaaagcagttgaaagtattt
gcaaagaaaatcggggagcttgaagttggtcaaatggagaatgtgtctcctggtcaaata
gtagatgaacctattcgtccgctcaatataccacgtaaggagaaagacttccaaggaatg
ctggagtataagaaggaggatgaaccaaaattaattaaaaatcttatattggaactaaag
ccccgtggtgttgctgtgaaccttattccaggattgccggcatatatattgtttatgtgt
gtgcgccatgctgattacctcaatgatgaccagaaagttcgctctcttctcacatcaaca
attaacggtattaaaaagatcttaaagaaaagaggagatgattttgaaaccgtgtccttc
tggctttccaacacctgccgattcctccattgtttgaagcagtacagcggagaagaggca
tttatgaagcacaacacaaccaggcagaatgatcattgtctaacaaacttcgaccttgct
gaatataggcaagtgctgagcgacctggccatccagatataccagcagcttgtccgagtg
ctggaaaacatcttgcagccaatgattgtttcaggaatgctggagcatgaaactattcag
ggtgtctcaggggtgaagccgactggtctgcggaagaggacgtccagtatagccgatgaa
gggacatataccttggattccatagtaaggcagctgaacactttccactcgataatgtgc
caacatggcacagatccagagctcatcaagcaggtggtgaagcagatgttctacattatt
ggtgcggtcaccctcaacaacctgctgctgcgaaaggacatgtgttcatggagcaaaggg
atgcagatcaggtacaatgtaagccagttagaggaatggctgcgagacaagaatctgatg
aacagcggggccaaagagacccttgaacccttaattcaggctgcccaattgttacaagtg
aagaagaaaacagatgaagatgcggaggctatctgctcgatgtgcaatgctctgaccact
gctcagattgtgaaggtgttgaatctctatacccctgtaaatgagtttgaagaaagggta
ctggtgacgtttatacgcaacatacagttgcgtctaagagacaggaaagacgctcctcag
ctgctaatggatgccaagcacatcttccctgtcaccttcccctttaacccatcatctctg
gctttagaaacaattcagatcccaggtagtctcagcctaggtttcatcgctcgtgtgtaa
DBGET
integrated database retrieval system
