Rana temporaria (common frog): 120931426
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Entry
120931426 CDS
T07929
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5 isoform X1
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120931426
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtem04040
]
120931426
Ion channels [BR:
rtem04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
120931426
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
120931426
NCBI-ProteinID:
XP_040198783
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Position
3:86527133..86596682
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AA seq
463 aa
AA seq
DB search
MMVYGKCLLWWIFSLFYLKRGWGIGISEPSFIAKCEDRLFKYLFQQQDYQKWVRPVENLN
DTVKVKFGLAITQLVDVDEKNQLMTTNVWLKQEWVDVKLRWSPSEFAGITSIRVPSDSIW
IPDIVLYDNADGRFEGSVTKAVVKYDGTINWTPPANYKSSCIIDVTFFPFDLQNCSMKFG
SWTYDGSQVDITLEDYEVDKRDFFDNGEWEIVTATGNRGNRTDGSSWYPFITYSFIIKRL
PLFYTLFLIIPCIGLSFLTILVFYLPSNGGEKISLCTSVLVSLTVFLLVIEEIIPSSSKV
IPLIGEYLVFTMIFVTLSIVITVFAINIHNRSSSTRNAMAPWVRKIFLHKLPKLLCMRSH
VDRYLTRKEDTGIVNGPETSRNILEAALDSIRYITRHVVKEHEVREVVEDWKFVAQVLDR
VFLWTFLLVSVLGSVFLFIPVIHKWANIIVPIHIGNMYGDRPT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgtatggaaagtgtcttctatggtggatcttcagtttattctatctgaaaaga
ggctggggaataggaatatctgaaccttcttttatagcaaagtgtgaagatagattattc
aaatatttatttcaacaacaagattaccagaagtgggttcgtccagtcgaaaacttgaat
gacacagtgaaagtgaagtttggtcttgctattactcagcttgtggatgtagatgaaaaa
aatcagctaatgaccactaatgtatggctaaaacaggaatgggtagatgtgaagctaagg
tggtctcctagtgagtttgctggaataacatcaattcgagtgccatctgattctatctgg
attccagacattgttctctatgacaatgctgatgggcgttttgaaggctctgttacaaaa
gctgttgtgaaatatgatggcaccataaactggacaccaccagctaattataaaagttct
tgtattattgatgtgaccttctttccttttgacctccaaaactgttctatgaagtttgga
tcctggacttatgatgggtcacaagttgacatcacacttgaagactacgaagtggacaaa
agagacttctttgataatggagaatgggaaatagtaactgcaactggaaacagggggaac
cgaacagatggaagctcctggtatccatttattacctattccttcatcataaaacgcttg
ccccttttttatacactctttcttattataccttgtataggactttccttcctaaccatc
ctggttttttacctcccttctaacggaggtgaaaaaatttcactgtgtacctcagtactt
gtgtctctgacggtgtttcttctggtgattgaggaaattattccatcttcttccaaagtc
attccgcttattggagaatatttggtgttcaccatgatatttgtaactctgtcaattgtt
ataacagtctttgccatcaatatccacaaccgatcctcctcaacacgcaatgcaatggca
ccatgggtgaggaagatcttccttcacaagcttcctaaactgctttgtatgaggagccat
gtagacaggtaccttacacgaaaagaagatacaggaatagtcaatggcccggagacctcc
agaaatatattagaggcagctttggattccattcgttacataacacgacatgtggtcaaa
gaacatgaagttcgtgaggttgttgaagattggaaatttgtggctcaagtattggaccgc
gtgtttttatggacatttcttctggtttcagtccttggctctgtatttctatttatccca
gtcatacacaagtgggcgaacattattgtgccgatacatattgggaacatgtatggagac
agacctacatga
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