Rana temporaria (common frog): 120931436
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Entry
120931436 CDS
T07929
Symbol
NEIL1
Name
(RefSeq) endonuclease 8-like 1 isoform X1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120931436 (NEIL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120931436 (NEIL1)
Enzymes [BR:
rtem01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
120931436 (NEIL1)
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120931436 (NEIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
120931436
NCBI-ProteinID:
XP_040198799
LinkDB
All DBs
Position
3:87359216..87391283
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AA seq
480 aa
AA seq
DB search
MPEGPELHLSGLFANRVCAGLHFAGKVEKSAVSKNSEVPFCNPKYTISAVARGKEVKLIL
TPALNKNDPASVIFRFGMSGSFKFTTEDNLPKHAHLRFYTKDSPRHVLSFVDPRRFGSWQ
FNGSWQAERGPCVMTEYEKFRENVLKNLSDKAFDKPICEALLNQKYFNGIGNYLRAEILY
RLNIPPFMQAREVLEAVKHQNENSDLSLSKKIKIKKENPDLLQLCNSVPLEVLDLGGKGY
DPENAVDYTAFGTWLQCYFVSGMKTLKDSNGRTIWFQGDPGPLAPKGNKVKKSRKSSAVK
PKPVKVEKTASKRKTSLTVKQEVKEEIDGEGGETQAKRKRRVKEENVVQEEDTKNGQKAK
RIPRGKKTSKEPERDVSRRSSNRGSARKTPSKRGRATQPKTEDAATPKPRTRKLKSEKPR
NSPKPRIRGLKPDMSATPRNSPKPRIRGLKSDMSATPRNSPTGKTRAKRKSTVRDAEAKS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgccagagggtcccgagctccatctttccggtctctttgcaaatagggtttgtgctggg
ctacactttgcaggcaaggtggaaaaatcagctgtcagtaaaaattctgaagtgccgttc
tgcaacccaaagtacaccatcagcgccgtggccagaggaaaggaggtcaagctgatcctc
accccggcattgaataaaaatgatcccgcgtctgtcattttcaggtttggcatgtcagga
agctttaaattcacaaccgaggataaccttcccaaacatgctcacctgcgcttctacacc
aaagattctccgcgtcacgttctcagctttgtggacccacgccgcttcggaagctggcag
ttcaatggatcgtggcaggcggagcgtggcccttgtgtgatgacggagtatgaaaagttc
agggagaatgtgttgaaaaacttgtctgacaaagcatttgacaaaccaatatgtgaagct
ttgttgaaccagaaatattttaatggcattggcaattacttgcgagcagaaatcttgtat
cggttgaacattccaccattcatgcaggctcgtgaggttctggaggccgtaaagcatcaa
aatgagaacagtgacctttcactcagcaagaaaataaaaattaaaaaggaaaatccagac
cttttgcagctctgcaactccgttccattggaagtccttgatctgggaggtaaaggatat
gaccctgaaaatgcagttgactatactgcctttggaacatggctgcaatgttattttgtc
tctggaatgaagactctgaaagacagcaatgggaggaccatctggttccagggggatccg
ggtccacttgctccaaagggcaacaaagtaaagaaatcacgtaaatcttcggctgtaaaa
cccaaaccagtcaaggttgagaagacagcctctaaaagaaaaacttccttgactgtgaaa
caagaagtaaaagaggagatagatggtgaaggaggggaaacgcaagcaaaaaggaagagg
agagtgaaagaggagaatgtggttcaagaagaggacacaaagaacggacagaaagcaaag
aggataccgagagggaagaaaaccagcaaagagcctgagagggatgtgagcaggagatca
tctaatcgaggttctgcaaggaaaactccttctaagagaggcagagctacacaaccaaag
acggaggacgccgcaactcccaaacccaggactcgtaagctgaaatctgagaagccccga
aattctccaaaacctagaattcggggactaaaacctgacatgagcgccacaccacgaaat
tctccaaaacctagaattcggggactaaaatctgacatgagcgccacaccacgaaattct
ccaacggggaaaacacgagcaaaaagaaaatctactgtacgcgatgcagaagccaagtct
tag
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integrated database retrieval system
