Rana temporaria (common frog): 120931488
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Entry
120931488 CDS
T07929
Symbol
LINGO1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120931488 (LINGO1)
Membrane trafficking [BR:
rtem04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
120931488 (LINGO1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
Ig_2
ig
V-set
DHU1_N
LRR_RPS2
LRR_9
Motif
Other DBs
NCBI-GeneID:
120931488
NCBI-ProteinID:
XP_040198924
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All DBs
Position
3:93499338..94118876
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AA seq
649 aa
AA seq
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MLSPGCRENCIKDFQHYPLHGDGKEKRRLAAAKNEGQVSPRSSMILPLPPCLCPILLLVL
GSFLSGSASGCPQRCECSPQDRSVLCHRKRHLNVPEGIPTDTRLLDLSKNRIKALNQDEF
SSFPYLEELELSENIVSLIEPGAFNALFNLRSLGLRSNRLKLIPLGVFTGLSNLTQLDIS
ENKIVILLDDMFQDLYNLKSLEVGDNDLVYISHRAFRGLNSLEELTLEKCNLTVVPTEAL
SHLHGLISLRLRYLNINIIRDYSFKRLFRLKSLEVAHWPYLDTMTANSLYGLNLTSLSIT
HSNLSTIPYVAIRHLVYLRFLNLSYNPITSVEGSMLHELLRLQEFHLVGGQLSVVEPYAF
RGLNHLRVLNVSSNFLNTLEESSFHSVGNLETLILDRNPLACDCRLMWIFRRRWRLNFNK
QQPSCSSPEYVQGKEFKDFPDVLQPTYFSCRKARIQDRSPQVVHVDEGHTVHFFCRADGD
PPPTILWQSPRKTFITSKSSGRLSVFPDGTLEVRYAQIQDNGTYHCVASNAAGNDTSLAH
LHVRSYSPDWPHQPNKTFAFISNQPNESDVNSTRATVPFPFDIKTLIIATTMGFISFLGV
VLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGLSTADAPRKFNMKMI
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgcctggatgcagagagaattgtattaaggactttcaacattatcctttgcat
ggagatggaaaagagaaaaggcgtctcgcagcagcgaaaaatgaaggccaggtgagtcca
cgatccagtatgattctcccgctgccaccttgcctgtgtcccatcctgttgcttgttctg
ggatccttcctgtctggctcggcctcaggttgtccccaacgctgcgaatgctctcctcag
gatcgttctgttttgtgccaccgcaagcgtcacctcaacgtccccgaaggcatccccact
gacacgcgactattggatctcagtaaaaataggatcaaggcacttaaccaggacgagttc
tcttcctttccttacttggaggagctggagctcagtgagaatatagtgtctttgatcgaa
cctggcgccttcaatgcccttttcaacctacgatctttggggctgcgaagtaatcgtctc
aagctcattcctttaggtgtattcacaggactcagtaaccttacacaacttgacatcagt
gaaaacaaaattgtcatattgctggatgacatgttccaggacctttataacctcaaatct
ctggaagttggagataatgatttggtgtatatttctcatcgtgccttccgtggactcaac
agcctggaagagctgacactggaaaagtgtaacctcaccgtggtgcccacagaggctttg
tcacatctgcatggtctcatctctctacggcttcggtaccttaacattaatataattcgt
gactactccttcaaaaggctgttccggctgaaaagtttagaagtggcccattggccatat
ttggacacaatgacagcgaatagcctctatggattaaatttaacatctctttctattaca
cacagcaatctgagcactataccatatgtggcaatcaggcatcttgtttatcttcgcttt
cttaacctttcatacaatccaatcacatctgtggagggatctatgttgcatgagttgctt
agacttcaggagttccacctggtaggtggtcagctttctgttgtggaaccctatgcattc
cgtggtctaaaccatttacgtgtactaaatgtttcctccaatttcctaaatacactggaa
gaatcttcttttcactctgtaggcaatctagaaacgttaattttggatcgtaatccattg
gcttgtgactgccgtttaatgtggatcttccggcgacgctggcgtctcaacttcaataaa
cagcagccatcctgttccagtccagaatatgtgcagggaaaggagttcaaagatttccct
gatgtgttgcagccaacgtatttttcatgtcgaaaagcacgaatccaggatcgaagtccc
caagttgtccatgtagacgaagggcatacagtacactttttttgccgtgctgatggagat
ccaccacctactattctatggcaatccccacggaagactttcatcaccagcaaaagtagc
ggtaggctgtctgtatttccagatggaactttggaagtacgttatgcccagatccaagat
aatgggacttatcattgtgtggcaagcaatgcagctggtaatgatacttcactggcccat
cttcatgtgcgcagttactcacctgactggcctcatcaacccaacaagacctttgccttc
atctcaaaccagccgaatgaaagcgatgtcaacagcactcgtgcaactgtccctttcccg
tttgatattaaaactcttataattgccaccactatgggattcatatcctttttgggggtg
gtcctgttttgcttggttttactatttctttggagcagaggaaaaggaaacactaaacat
aacatagagatagaatatgttccgcgaaaatctgatgctggactctctactgcagatgct
cctcggaagtttaacatgaagatgatatga
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