KEGG   Rana temporaria (common frog): 120931507
Entry
120931507         CDS       T07929                                 
Symbol
NEO1
Name
(RefSeq) LOW QUALITY PROTEIN: neogenin
  KO
K06766  neogenin
Organism
rtem  Rana temporaria (common frog)
Pathway
rtem04350  TGF-beta signaling pathway
rtem04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    120931507 (NEO1)
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    120931507 (NEO1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rtem04515]
    120931507 (NEO1)
Cell adhesion molecules [BR:rtem04515]
 Immunoglobulin superfamily
  DCC/UNC5 family
   120931507 (NEO1)
SSDB
Motif
Pfam: Neogenin_C fn3 I-set Ig_3 Ig_2 ig Pur_ac_phosph_N Ig_DSCAM-DSCAML_C V-set NDNF Interfer-bind Tissue_fac fn3_2 C2-set_2 C1-set SusE DUF4998 C2-set_3 Ig_4 C2-set Sp38 V-set_CD47 Ig_6 EphA2_TM FAM176
Other DBs
NCBI-GeneID: 120931507
NCBI-ProteinID: XP_040198961
LinkDB
Position
3:complement(96313118..96536450)
AA seq 1422 aa
MAAWGPPRSPVRMTRVLLLVGSILLLISVQEPAGAARTAGSGFRTFTPFYFLTEPVDTVT
LRGTPAILNCSVYAEPSAKIEWKKDGTFLSLVSDDRRRLLPDGSLFITSVVHSKHNKPDE
GFYQCVATVESLGSIVSRTAKLSVAGLPRFSSQPEASSVYIGDSFVLSCDVSPELVSFVH
WEQDRSLRELDDRTSLLYNGSLVISNANESDAGLYRCGVGSGASLKYSEEAEIKVLQEMG
EYRSLVFMRQPFSVTSVAGQTVLLSCVVSGFPTPNIHWSHKQEEIVLDSSDRLALLAGGS
LQISNLTEEDAGIYTCTADNGNQTIQAQAELIVQVPPVFNVKPSNTHAHESMDIVFECEV
SGKPTPAVKWVKNGDMVIPSDYFKIVDDHDLQVLGLVRSDEGFYQCIAENEVGNVQAAAQ
LIILEPAATPGGPLPSSPRDVVASLVSTRFIKLTWRVPADAHGENLTYQVYYSKEGMNRE
RVENTSRPGELQVTIQNLLPETVYYFRVVAQNNHGTGESSTPLKVETQHEVQVPGPAPNL
RATSTSPTSVSVSWETPLSGNGEIQNYKLYYMEKGAGNEQDIDVGGLSYTVTGLKKYTEY
TFRVVAINKHGPGVSTQDVIIRTLSDVPSAAPQNLTLEVRSSQSILVQWQPPPLGTQNGQ
IVGYKLRYRKTARKTETIEILVENQLSQLVTGLEKNTEYSFRVVAMTVNGSGPATDWAAA
DTFENDLDESRVPDMPSSLHVRPLVTNIVVSWTPPENQHQVVVRGYAIGYGLGSPHAQTV
RVDHKQRYYTIENLDPSSHYVISLKAFNNMGEGIPLYESAVTRQHTDTSEVDVYVVHXPH
TPQFPEPSPMLPPVGXPATILSSDTVRLTWADNSLPKTRRSQMHVIISAKWKTNIPANTK
YKMANSTTLSYLVSGLKSNTLYEFSVMVTKGRRSSTWSMTAHGTTFESVPSSPPKDVTVV
SKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDVHAELHDWVIEPVVGNRLTHQIQELTL
DTPYYFKIQARNSKGMGPIQKLCFFRTPKASGVSGKGRSSEMGTTPLGGSNSPHGSPTSL
DQNMLLTIIVSLGVITVLVAVVIAAICSRRSNAHHKKKRAACKSVNGSHKYKANSKDVKP
PDLWIHHERLELKPVDKSPETNPMLTDTSLPRSPQDLTPGESTTEGSIHQHSNSYRGLES
EDSVSSLAGRRGMRPKIMMPFDSQPPQPVVSAHPIHSIDNSNFRSVPGFMLHVLGGTSHS
AESVRHTPSCDTVVVAAAAASSTSQTGGEDPDPPGGSFLPGSLDEDSGPSIPTAHIRPTH
PLKSFAVPAVPVPASGAAFEPLPSSPLLAQQGPSSLSVKTASLGTLGRVRPPLPVTVPSA
PEPLETSRMLDGSESSYEPDELSKEMAHLEGLMKDLNAITTA
NT seq 4269 nt   +upstreamnt  +downstreamnt
atggcggcttggggccccccgcggtctcctgtccgtatgacccgggtgctgctgctcgtg
ggctccatccttcttctcatctccgtgcaggagccggctggagccgcgagaactgcaggc
tccgggttcaggacattcacgcccttctactttctaaccgaaccagtggacactgtgact
ttacgtgggactccagccattttgaactgttctgtatatgccgaaccttctgcaaagatc
gaatggaaaaaggatgggacttttttaagtttggtttctgatgaccggcggcgacttctt
ccagatggatctttgtttattaccagtgttgtacactccaagcacaacaaaccagatgag
gggttttaccagtgtgtggccaccgtggagagcttgggcagtattgtcagtcgcactgca
aaactctctgttgcaggtctcccccgattttccagccagcctgaagcctcttctgtgtac
attggggatagttttgtattgagctgtgatgtaagcccagaactagtgtcatttgttcac
tgggagcaggacaggtctttacgagaactggatgacagaacttcattgctgtataatggc
agcttggttatcagcaacgccaatgagagtgatgctggtctgtatcggtgtggagtgggc
agtggagcatctctcaaatacagtgaagaggctgagattaaagtactgcaagaaatggga
gagtatcgctctctggtatttatgcgccagcctttctccgttacaagcgttgcaggacaa
acggtactgctttcctgtgtggtgtctgggttcccaacccccaacatacactggagccac
aaacaggaagaaatcgttcttgacagctcggacagattggcattgttggcgggaggcagc
ctgcagatcagcaatctgacagaggaggatgctgggatctatacatgtacagcagacaat
ggaaaccaaaccatacaggcccaagctgaacttattgtacaagtgcctcctgtttttaat
gttaagccatctaatactcatgctcatgaatctatggacattgtgtttgaatgtgaggtg
agtggaaaacccacaccggctgtcaaatgggtgaagaatggagacatggttattcccagc
gattacttcaaaatagtggatgatcatgatctgcaagttcttggactggtacgctcagat
gaagggttttatcaatgtattgctgagaatgaggtgggaaatgttcaggcggcagctcag
ctgattattttagagcctgctgccacaccaggaggccctcttccatcatccccgagggat
gtcgtggcctctttggtgtccacgcgattcatcaagctgacctggcgtgtacctgcggat
gctcatggagaaaatcttacttaccaagtctattacagcaaggagggaatgaacagagaa
cgtgtggagaacaccagccgcccaggggagttgcaggtcaccattcagaacctactgcca
gaaactgtctattactttcgagttgtggcacaaaataaccatggaactggggaaagttct
acccctctgaaggtggagacacaacatgaggttcaagttccaggtcctgcaccaaattta
agagccacatccacctccccaacttctgtcagtgtcagctgggaaactccactgtctgga
aatggggaaatacaaaactacaaactctactacatggagaaaggtgcaggaaatgagcag
gatattgatgtggggggactctcgtatactgtcactggactgaagaaatacaccgaatat
acattccgagttgtggcgattaacaaacatgggccaggagtgtcaacgcaggatgtcatt
atcaggactctttctgatgtacccagtgctgctcctcaaaacctgaccctggaagtgcgc
agctcacagagcatcctagtgcagtggcaaccccctcctctgggcactcagaatggacag
attgtaggttataagttgcgttaccgcaagactgcaagaaaaactgaaactattgagatc
ctggtagaaaaccagctctcacaacttgttactgggctagagaagaacacagaatacagc
tttcgggttgtggccatgaccgtaaatgggagtggaccagccactgactgggctgctgca
gacacatttgaaaatgatcttgatgaatcacgtgttcctgatatgccaagctcacttcat
gtgcgtcctttggtgaccaacattgttgttagctggacacccccagaaaatcagcatcaa
gtagttgtccgtggttatgctattggttatggacttggaagtcctcatgctcagacagtt
cgtgttgaccataaacagcgttactacaccattgaaaatctggaccctagttcacactat
gtcatctctctgaaggcttttaacaatatgggggaaggcatccctttatatgaaagtgct
gtaacgcgacaacatacagacacttctgaagttgatgtttatgttgttcatntgcctcat
acaccccagttcccagagcccagccccatgttgccccctgtggggnntccagcaaccatc
ttgagcagtgacacagtacggctaacctgggcagacaactctctacccaaaaccagaaga
tcacagatgcacgttattatttctgcaaaatggaaaaccaacattccagctaacacaaag
tacaagatggcaaacagtacaacactcagctatttggttagtggtctaaagtcaaacacc
ctttatgagttctcagtgatggttactaaaggtcgacggtcaagtacatggagcatgact
gcccatggcactacctttgaatcagtgccatcctcgcctcctaaagatgtgactgtcgtg
agcaaagaaggcaagccacgcactattattgtgaactggcaacctccatcagaagcaaat
ggcaaaattacaggctacattatatattacagcacagatgttcatgcagagctgcatgac
tgggtaatagagccagttgttggaaatcgcctgacccaccaaattcaagagctgactcta
gatactccatattactttaagatccaagcaagaaattctaaaggaatgggtcccattcag
aagctgtgcttttttcgtacaccaaaagcatcgggtgtatcaggaaaaggccgctcctca
gaaatgggaaccacgccactcggaggcagtaatagtcctcatggaagccctacttctctg
gatcagaacatgctgttaaccatcattgtatcccttggagttataactgtgctagtggct
gtggtcattgctgccatctgctcccgacgctccaacgcccaccataaaaagaaaagagct
gcgtgcaagtctgttaatgggtcccataaatacaaagccaactctaaggatgtgaagcct
cctgatctttggattcaccatgaaagactagagctaaagccagtggacaagtccccagaa
acaaatcctatgctgacagacaccagtctgccccgttccccacaggacctgacacctggg
gaaagcactacagaaggcagcattcaccagcacagcaattcataccgaggtctggaatca
gaggattctgtatcctcacttgcaggacgtcggggaatgagaccaaaaataatgatgccc
tttgactctcagcctccgcagccggttgtcagtgctcatcccatccattccatcgataac
tctaatttccgctcagtgcctgggttcatgctgcacgtgctgggtggaacttctcattct
gcagaatctgtccgacatacccccagctgtgacacagtagtagtagcagcagcagcagca
tcatccacttctcagactggtggtgaggacccagatcctccaggaggcagctttctaccc
ggttctttggatgaagattcaggacccagcattcctacagcacatatcagacccacccat
cccctgaagagctttgcagtacctgctgttcctgttccagcctccggagcagcatttgag
ccactgccaagctctccccttttggcacaacaaggtccgtcctccctatctgtaaaaacg
gcttctctagggaccctggggagagtacgtcctccgcttccagtaactgtgcccagtgcc
cctgaaccactagagaccagcagaatgctagatggctcagagagtagttatgaaccagat
gaactaagcaaggagatggctcaccttgaaggcctgatgaaggatctaaatgccataacc
acagcatga

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