Rana temporaria (common frog): 120931653
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Entry
120931653 CDS
T07929
Symbol
WDR36
Name
(RefSeq) WD repeat-containing protein 36
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120931653 (WDR36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtem03009
]
120931653 (WDR36)
Ribosome biogenesis [BR:
rtem03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
120931653 (WDR36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_DCAF4
NBCH_WD40
B-prop_COPA_B_2nd
WD40_RFWD3
WD40_like
Beta-prop_IFT122_1st
Beta-prop_LRRK2
Beta-prop_EIPR1
Zn_Ribbon_Topo
Motif
Other DBs
NCBI-GeneID:
120931653
NCBI-ProteinID:
XP_040199234
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Position
1:138515475..138606205
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AA seq
895 aa
AA seq
DB search
MAAETRSRDSVLFTGYRSLGLYSNHIPHVVRYHKRHKEFYVVTAVGKSFLTYNVNRLGQV
AVSNALPEDINCLAADRMLVFVSHGNLLKAFAKNKEVVHTYSGHEAEIHLVLPFGDHVIS
VDIDNNMIIWDVASEEEYLQMNFDRSYFTISAILHPSTYLNKIILGSQQGTLQLWNVKSN
KLLYTFKGWETGVTVLQQAPAVDVVAVGLTSGKIIVHNIKFDETLMTFQQDWGPITAISF
RTDGHPIMAAGSPIGHIGLWDLEEKKLMSQMRDVHSTAIAGLTFVHGEPLLITNAADNAL
RVWIFDGPGGQGRLLRFRMGHSAPPTFIRHHGLDGKQILSAGQDGALHSFSTVHDRYSKS
LGHGSINKAKAKKMGSRGAVLRLPPVISFASETARQNDWDGIIACHQNSLRCTTWNYVRS
TMGAYKLTPPDLKNTKPHDVYATAVELTSCGNFVVIGLSNGNVDVYNIQSGIHRGHYGKD
TAHDGSVRGVAVDGLNQMTITAGSDQLVKFWKFKSKELIQTADLGISPTAILLHRESGML
AISLDDFSIIVFDVETRKLVRRFPGHNGKINDMTYSPDGRWLMTASMDCTIKVWDFPSGC
LIDCFLLDSAVVSLTMSPTGDFLSTAHVDDLGIYLWSNKSLFSLISLRPLPSDYEPIVVM
LPGATVEIEENELEVREDSSEDMMEYESPEQLAEQLVTLSLLSESRWKNLLNLDVIKRRN
KPKEPPKVPKSAPFFIPTLPGLVPRFGSETREQDPQSKILNLGVLEQKSTFCVQLEEALD
QQNYDIPLKTIKEMGPSNIDTEIRNLAPEGGGSVEVMQSFLKMIGRMLDVKRDFELAQAY
LALFLKIHLRFISAEPKLLEEISLLSPHLDETWHHMQTLFNQSLCVLNYMKSALL
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggagacgagaagtcgggacagcgttctattcaccgggtaccggtctctgggc
ttgtacagtaaccacatcccccatgtagtcagataccacaagaggcacaaggagttctac
gtggttaccgccgtggggaaaagcttcctcacttataatgtgaacagacttggtcaagtt
gcagtcagcaatgctcttccagaagatattaactgtctggctgcagatcgcatgctggta
tttgtatctcatgggaaccttcttaaggcatttgcaaagaacaaagaggtagttcacaca
tacagtggacatgaggcagaaattcatctagtgctcccatttggggatcatgtaatatct
gtggacattgataataacatgataatttgggatgttgcgtcagaagaggaatacttgcag
atgaattttgatagaagctatttcactatctctgctatactgcacccaagtacctacttg
aataaaattattttgggaagccagcagggaactcttcagctctggaatgtcaaatccaac
aaacttctgtatacattcaaaggctgggaaactggtgtgactgttcttcaacaggctcct
gcagttgatgtggtggctgttgggctgacaagcggtaaaattatcgtgcacaacatcaaa
tttgatgaaaccctgatgacttttcagcaagactggggtccgattactgcaatatcattc
cgtacagatggacatccaataatggcagctggaagccccattggtcacataggcctgtgg
gatttggaagaaaagaaactgatgagccagatgagggatgttcattccactgctattgct
gggctaacgtttgttcatggagaacctctgctcattaccaatgctgcggataatgcgtta
cgggtctggatctttgatggcccaggaggccaaggtcgtttgcttaggtttcgtatgggc
catagtgctccacccactttcattcgacatcacggtcttgatggcaagcagattcttagt
gcaggccaagatggggcattgcattcattttccacagttcatgacagatatagtaaaagc
cttggtcatggttctataaataaagccaaagctaaaaagatgggttcgcgtggagctgtt
ttaagacttccacctgtcatatcctttgcctctgagacggcacgacagaatgactgggat
ggaataattgcgtgtcatcagaattcactcaggtgtaccacttggaattatgtaaggtct
actatgggagcatacaagctaacacctcctgatctcaagaataccaagccacatgacgtt
tatgcaacagctgttgagttaacaagttgtggcaattttgtggtgattggcctgtcaaat
ggcaatgtagatgtgtataatattcagtctggaattcacagaggccactatggaaaagac
acagcccatgatggctcagtcaggggagtggctgtagatggcttaaaccagatgacaatc
acagctggcagcgaccaactggtaaagttttggaagttcaagtcaaaagagttaatacag
accgcagacctcggcatttctccaacggccattttactccatagagagagtggaatgttg
gcaatttctctggatgacttcagcattattgttttcgacgttgaaacccggaaacttgta
agacggttccctggacacaatgggaagataaatgacatgacttatagccctgatggccga
tggctaatgactgcatctatggactgtacaatcaaagtctgggactttccatctggatgc
ctcattgactgtttcctgctggattcagctgttgtcagcctaacaatgtcccccactgga
gatttcttatccactgctcatgtggatgaccttggtatttacttgtggtcaaacaaatct
ctcttttccctgatctcgttacgcccacttccatcagattatgagcctattgtggttatg
cttcctggagcaactgttgaaattgaagaaaatgaacttgaagtaagggaagactccagt
gaggatatgatggaatatgagtctccagaacagttagcagagcagctggtcaccttatca
ctgttatctgaatcaagatggaaaaatcttctaaaccttgatgtcattaagagaaggaac
aaacccaaagagcctccgaaggtgcctaaatcggcaccattttttatcccgactcttcca
ggacttgttccgcgctttggttctgagacccgggagcaagatcctcaatcaaaaattttg
aatcttggagttcttgaacagaaatctactttctgtgtccagcttgaagaagcccttgat
cagcaaaactatgacattccactgaaaacgataaaggagatgggaccttccaacattgac
acagagattcggaacttggctccagaaggcggtggttctgttgaagtaatgcagagcttc
ttgaagatgattggcagaatgttggatgtaaaacgggattttgagcttgcccaggcttac
cttgctttattcctaaagatccatctgaggttcatttcagccgagccaaagttattagaa
gagatttctttgttatccccgcaccttgacgagacatggcatcacatgcagaccttgttt
aatcagagcttgtgtgttctaaactacatgaaaagtgctttattgtga
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