Rana temporaria (common frog): 120931785
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Entry
120931785 CDS
T07929
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04510
Focal adhesion
rtem04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120931785 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120931785 (LAMB1)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
120931785
NCBI-ProteinID:
XP_040199484
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All DBs
Position
3:complement(142846814..142911419)
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AA seq
1780 aa
AA seq
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MVLIQVPGLFLVVLFGIVHSQVPEFSHGCAEGSCYPATGDLLNGRAQQLVASSTCGLQKP
SPFCIVSHLQDEKKCFTCDSRKLYNAVDNTESHLIENVVTTFDPNRFNLWWQSENGVENV
TIQLDLEAEFHFTHLIMTFKTFRPAAMVIERSSDFGKTWNIYRYFAYDCESSFPGVSFGP
MKKVDDVICDSRYSDIEPSTEGEVIYRVLDPAFRIDDPYSPRIKSLLRITNLRIKFLKLH
TLGDNLLDSRVEIKEKYYYAIYDMIVRGNCFCYGHASECAPVNGYSDNVEGMVHGRCVCR
HHTKGLNCELCMDFYHDLPWRPAEGRSSNACKKCNCNEHSTQCHFDMAVYMSTGNTSGGV
CDDCQHNTMGRNCEQCKPFFYQHPDKDIRDPNICQPCNCDPAGSQNGGICDRYSDFSVGL
IAGQCRCKSNIEGERCDRCKEGHYDLSAEDPDGCQPCGCNSLGTIPGGNSCDSVEGNCYC
KRFVMGKQCDQCMPGFWGLSNDLDGCRPCDCDRGGALDNICSAESGQCRCRPHMIGRQCN
EVESGFYFISLDHYIYEAEDADFGPSVRTVERVHPQDRTPSWTGPGFAHVPEGGYLEFHI
KNIPVSMEYDLLIRYEPQLPEQWEEAVITVIRPSKIPTSSRCGNTIPSDDNQSVALPPGS
RYIVLPRPICFEKGLNYTIRLELPRYSVNSNVENPYTLIDSIVLLPHVKSLDIFSSGGSG
DEVSNAWQTFQRYRCTENSQSVVKTPSTDVCKDFLFSISALLHEGALECQCDPQGSLSAV
CDPNGGHCDCRPNVVGKNCDKCAPGTYGFGPSGCKPCECNLKGSSHSFCHPETGQCPCIH
GAYGRQCDACLPGYWGFPNCQQCQCNGHTDDCNTLTGECTSCRDHTEGYSCERCLAGYYG
DPRLGSGDHCRPCPCPDGPGSGRQFASGCYKDPTSEHVVCTCNKGYTGVRCDGCASGYYG
NPEQNGGVCQPCNCNNNIDMSDPLACDKQSGVCLKCLHNTEGENCHQCGLGYYGSAIHQD
CKKCVCNYLGTEQEHCQGDVSCHCNTTTGQCPCLKNVVGQSCDHCAPNTWNLASGDGCEL
CGCDPGRSLGPSCNEFTGQCHCMPGFGGRNCSECQELFWGNPDFECKACDCDSRGIQTPQ
CDRSDGHCICNEGVEGFRCDKCARGYSGIFPNCAPCHKCFGLWDVIIKELSNRTNRLLDR
ASALKITGVIGPYQKTIDKVQETLKEVQTIISQNPAVEPLKNLDRLFDEAEKLKSEVWEK
VEEVEKKITEINLNGSVKLDDLQADADSVSKALKELGQQLEYMKISNVRGAMDSINKYFQ
MSVEAEEKVNASAVNPDSILEHSGSTRREVEDLIDEKYIAFKEGQEEQSRFLDELAGEVQ
NLDLSLLSETTCGTPVGASCEVSQCGGLGCLTEDGKRKCGGDGCNGLVDIANGAWKTAMN
FDKEIQSAMAEVEELSKLVSESKLRAEEAKQSAQSVLNKANSTKEKVDKSNEDLRNLIKQ
IRDFLMQDGADLDSIEAVASEVLKMEMPTTPEQLQALTEDIRERVDSLSDVESILQQSAG
DIAKAESLLDEAKKSSQSASDVKATADMVKEALEEAGKAQSAAEKAIKQADDDIKGTNDL
LTSIESEAVVSEETLKNATERMNELEKNLGDLMKKSTSNSESLDSIEKSVEDVKADADKV
KKVLDNELSNKYKKVEDLITKKAEDSSEARKKAEQLQKEAKTLLTQANKKLNLLKELEKT
YEDNQRILEEKAKQLVTLEETVRTLLQAISQKAAVYSTCL
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atggtgctaatccaggtgccgggacttttcctagtcgtactgtttggaattgtccattct
caagtaccagagttcagccatggatgtgctgaaggcagctgctacccagccactggtgac
ctgctgaatggacgggcacagcaactcgttgcatcttctacatgtggtctccagaagcca
agtccattctgtattgttagccatctccaggatgaaaagaaatgtttcacgtgtgattcg
cgaaaactatataacgctgtggataatacagaaagtcatcttattgaaaacgtagtcaca
acttttgatcctaatcgctttaatttgtggtggcagtcagaaaacggtgtggaaaatgtc
acaatccagctggatcttgaagcagaattccatttcactcatctcatcatgacctttaag
accttccggccagctgcaatggttattgaaagatcatcagactttggtaaaacatggaac
atctacagatattttgcatatgattgtgagtcgtcattccctggagtttcttttgggcca
atgaaaaaagttgatgatgtcatctgtgactctcgatactctgacattgaaccttccaca
gagggagaggttatatatcgtgtcttggatccagcttttcgtattgatgatccatatagt
cctaggattaaaagcttgttaagaattacaaacctgagaataaagttcctaaagctccac
actttgggtgataaccttttggattcccgagttgaaataaaagagaaatactactatgcc
atttatgatatgattgttcgtggtaactgtttttgctatggacatgctagtgaatgcgca
cctgtaaatggatattccgacaatgtggaaggaatggtacatggacgctgtgtttgtaga
catcacacaaaaggtttgaattgtgaactgtgtatggacttttatcatgatttgccttgg
agaccagcagaaggtcgtagcagtaatgcttgtaaaaaatgcaactgtaacgagcactct
acacaatgtcactttgacatggctgtatacatgtcaactggtaatacaagtggtggagtg
tgtgatgattgccagcataacacaatgggacggaactgtgagcagtgcaagccattcttc
tatcagcatccagacaaagacatacgtgacccaaacatctgtcaaccttgtaactgcgac
ccagctggatcccaaaatggtggcatatgtgaccgttattcagatttctctgtgggactt
attgctggccaatgtagatgcaagtcaaatatagagggagagcgctgtgatcgatgcaag
gaaggccactatgacctaagtgcagaagatccagatggatgccagccttgtggatgcaat
tctctaggaactattcctggtggcaattcgtgtgactcggtagaaggaaactgttattgc
aagcgtttcgtgatggggaagcagtgcgaccagtgcatgcctggattctggggtttgagc
aatgacctggatggatgtcgaccttgtgactgtgaccgtggtggagcactggataacatc
tgttctgctgagtcaggacaatgccgctgtaggccacacatgattggtcgtcagtgcaat
gaagtggagtctggcttttatttcatctctttagaccattacatctacgaagcagaggat
gcagattttggccctagtgtgagaactgttgaacgcgtgcaccctcaagatcgaacacca
tcttggacaggacctggatttgcccatgttccagaaggaggatacttggagtttcacatt
aaaaatattccagtctcaatggagtatgatcttttaatccgttatgaaccacagctccca
gaacaatgggaagaagcagtgataacagttattcgtccatcgaaaattcccacaagcagt
agatgtggtaataccatcccaagtgatgacaaccaaagtgtagcattacctccaggatcc
aggtatatagttcttcctcgtcctatatgctttgagaaaggtctgaattacaccatacgt
ctggagttgccacgatattcagttaactctaatgtagaaaatccctacacattaatcgat
tctattgttctgcttcctcatgtaaagtccctggacatattcagctccggagggtcagga
gatgaggtcagcaatgcctggcagacattccagagatacagatgtacagagaacagccaa
agtgttgtgaaaactccttccacagatgtctgtaaagacttcctcttcagcatctcagct
ctgctacatgaaggggccctagaatgtcagtgtgaccctcaaggctccctaagtgctgta
tgcgacccgaatggagggcattgcgattgtcggccaaatgtggttggaaagaattgcgat
aaatgtgcacctggaacttatggctttgggcctagtggatgcaaaccttgtgaatgcaat
cttaaaggatcttctcattctttctgccaccctgagactggccagtgtccgtgtatccat
ggtgcctatggaagacaatgtgatgcatgtttacctggctactggggattcccaaactgt
cagcagtgccaatgtaatggacataccgatgactgcaatacccttactggagagtgcacc
agctgcagagatcacactgaaggttacagctgtgaaagatgtttagctggttattatgga
gaccccaggcttggttcgggtgatcattgcagaccatgtccatgcccagatggacccgga
agtggacgccagtttgctagtggatgttataaagaccctacatctgagcatgttgtatgt
acatgtaataaaggatatacaggtgttcgctgtgacggttgtgcatctggctattatgga
aacccagaacagaatggtggtgtctgtcagccttgcaactgcaataataacatagatatg
tctgatccactggcttgtgataaacaatcaggagtatgtctaaagtgcctccataacaca
gagggtgaaaactgccatcagtgcggactgggatactatggcagtgcaattcatcaggat
tgtaaaaagtgcgtctgtaattacctgggcactgaacaggagcactgtcagggagatgtc
agttgccactgtaatacaaccaccggccagtgcccttgtctgaagaatgtggttggacag
agctgtgatcactgtgcaccgaacacctggaatttagccagtggagatggttgtgagcta
tgcggttgtgatccaggtcgttctctgggaccatcttgtaatgagttcactggacagtgc
cattgcatgcctggtttcggagggaggaactgcagtgaatgccaggaacttttctggggt
aatccagatttcgaatgcaaagcttgtgattgtgactcgaggggtatacagacaccccag
tgtgatcgatctgatggccactgcatctgcaatgagggtgtagaaggattccgttgtgat
aaatgtgcccgaggatattctggaattttcccaaactgtgctccttgccacaagtgcttt
ggcctttgggatgtgatcatcaaagagctgtccaataggaccaacagactgctggaccgt
gccagtgctctgaaaatcactggagttattggaccataccagaaaaccattgacaaagtc
caggaaacacttaaagaagttcagaccattatctcccagaatcctgctgttgaaccactg
aaaaaccttgacagactttttgatgaggctgagaaattgaaatcagaagtctgggaaaaa
gttgaagaagtggagaagaaaataaccgaaattaatcttaatggatcagtcaaactggat
gatctacaggctgatgcagatagtgttagcaaagcactgaaagagcttggacaacaacta
gagtacatgaagatttctaatgttcgaggagctatggacagcatcaataaatacttccag
atgtctgtagaggcagaagaaaaggtcaacgcctctgctgtgaacccagatagcattctt
gaacactcagggtctacacgacgggaagtggaagatctcatagatgaaaaatatattgca
tttaaagaaggacaagaggagcagtctcgatttctagatgaacttgctggcgaggtccag
aatttggatctttctttgttgtctgaaacgacttgtggaacaccagttggtgcatcatgt
gaagtttcacagtgtggaggacttggctgcttaacagaagatggcaagagaaaatgtgga
ggagacggctgtaacggcttggtggacatagcaaacggtgcatggaaaactgctatgaat
tttgataaagaaattcagagtgcaatggcagaagtggaggagctctctaaactggtttct
gaatcaaagctgagagcagaagaagcaaaacaaagtgcccaaagtgttctaaataaagcc
aactcgacaaaagaaaaagttgacaaaagcaatgaagatctaagaaatcttatcaagcaa
atccgtgactttttaatgcaggatggcgcagatctggatagtattgaagctgttgctagt
gaggtattgaaaatggaaatgcccactactcctgagcagctgcaggctcttactgaggat
atacgtgaacgagtggatagcctttctgatgtggaaagcatccttcaacaaagtgctggg
gacatcgctaaagcagagtctctgctggatgaagctaaaaaatcaagccagagtgcatcg
gatgttaaggctacagctgatatggtgaaagaagctctagaggaagcaggcaaagcccag
agtgctgctgaaaaagctattaagcaagcagatgatgacattaaagggacaaatgatctg
ctgacttctattgagtcggaagcagtagtctcagaagaaacattaaagaatgccactgaa
cgtatgaatgaacttgaaaagaatctgggagatctaatgaagaagtctacttccaactcg
gagtctttagattcaattgaaaagtctgttgaagatgtaaaagcagatgcagacaaagta
aaaaaggtgctagacaatgaacttagtaataaatataagaaagtcgaggacctgataacg
aaaaaagctgaagattcttcagaggccagaaagaaagcagaacaacttcaaaaagaagcg
aaaaccttgttaacacaagcaaacaagaaactgaacttactaaaagaattagaaaagaca
tatgaagataaccagagaatattagaagagaaggcaaaacagttggtgactttagaagaa
acagtccggacacttctacaagctatcagccagaaagccgcagtctacagcacatgcttg
taa
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integrated database retrieval system