Rana temporaria (common frog): 120931786
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Entry
120931786 CDS
T07929
Name
(RefSeq) laminin subunit beta-4-like isoform X1
KO
K06245
laminin, beta 4
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04510
Focal adhesion
rtem04512
ECM-receptor interaction
rtem04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120931786
04518 Integrin signaling
120931786
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120931786
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_LMN_ATRN
Laminin_N
LAMININ_IV_B
LAMB1
LAMB4
HR1_TOCA
Motif
Other DBs
NCBI-GeneID:
120931786
NCBI-ProteinID:
XP_040199485
LinkDB
All DBs
Position
3:complement(142955766..143136315)
Genome browser
AA seq
2143 aa
AA seq
DB search
MHRIHVLVIILCLAELISLGNAQGSCADGSCYPTIGDLLVGRNKQISASSTCGQDEPQRY
CIISYLEDDQKCFMCDSRYPYDPYNHPNSHQIENVITTFDSDWKKKWWQSENGIDFVSIR
LDLETLFQFSHLVITFKSFRPAAMLVERSRDFGQTWKVFKYFALNCASAFPGIPEGHADD
VGDVVCDSRYSDIEPSTEGEVVLKALDPSFDIDDPYDPYIQDIITLTNIRINFTKLHTFG
DTHSNGWQSELQEKYFYGIYEMILRGNCFCNGHASQCVPVDNTRGDVFSQPGMVHGKCVC
QHNTDGLNCEKCKEFYNDAPWSPAVGFQDNACRQCNCNGHSDKCHFEIKVYEASNGTSGG
VCDNCQHNTLGNHCEFCKPYFYHDPLKDSSDPNTCIPCDCDPDGTHGGGICEGHTNRRLA
IIAGTCLCKQNVEGKRCDQCKPGYFGLSATNFWGCQYCGCNQFGSLPSSICDAITGQCQC
QNFATGQYCDECMAGYWGLGNSLHPCSACSCDIGGAHSVVCSQSTGQCDCLPNIVGLQCK
QPADGYYFIPLDYYIYEAEKAQALSGSATIINPTPVPKCQDYFIKQGIDFRFENDRIILK
SMPKRSVRRRRQAQEVVPFGTEGVVELVLRQPTPGKPVTWTGPGFARVLHGAGLRFTVNN
IPYSMDFLIAIRYEPESLEDWTARIMVNLPKDGLSEHCKTNKPLPEGYTLQLLATNRIAL
LNTSVCLDPDREYLIDVYFTQVSNIHTNKQYILVDSLGLIPQISSLSNLCTEAQLEEYDY
YNCIEIAADIGTAILPDVCEKLIISMSARIHNGAVKCSCNSEGSLSNRCSKIGGQCKCKP
NVVGSCCDKCAVGSYGFGPTGCVGCDCHINGSMSTLCDQITGQCACRKDIQGRRCDRCLP
GYYGFPNCRPCKCNGNSDSCDPITGACKSCKGFATGTNCERCLDNYFGNPLSGQPCQPCM
CPGSPTSGQYFAYSCQQNPDTLEVTCNCLEGYTGKNCDECPVGFYGNIEKGETCLPCQCN
NNIDIKDPNACDKVTGECLKCLNNTYGRHCDRCPPAYYGYPNCRPCRCSGNSDSCDPTTG
ACKSCKGFATGNNCERCLDNYFGNPLKGQPCRPCMCPGSPTGNQYFAHSCQQSPETLEVT
CNCLEGYTGKNCDECPVGFYGNIEKGETCLPCQCNNNIDIKDPNACDKVTGECLKCLNNT
YGRHCDRCPPAYYGYPNCRPCQCSGNSESCDPITGACKSCKGFATGNNCERCLDNYFGNP
LKGQPCRPCMCPGSPTGNQYFAHSCQQNPETLEVTCNCLEGYTGKNCDECPVGFYGDLKQ
GEKCSPCQCNKNIDITDPEACDSVTGECLKCLNNTYGRDCASCLPGYFGSGRYQNCTSCV
CNSTGTKDETCSIYEEVGECVCDRTTGQCPCLPNVIGIRCDNCAPGYWGFSSGKGCKPCN
CSLNNSQEKQCNQFTGQCLCKPQYKGKKCDQCEENFYGNPKVKCIPCRCNLKGSNKPMCD
KDTGACNCKVGVTGRYCDQCAPKFKQEFPACPRCHMCFDEYEADVSSLADSVHDLVKLAA
NIGPTRSPMGCDVQMSILKDRLSVIEKMFKSRILSPDKYAKVKDFYESIRNKVNKIRISD
LGKFSEIPKLNKTIWDMEKEIDVLFKNLDIIRIKKQKENIVKVKDIQAYVDKITKHYKTS
LSAAEKARNATPIIRTASKTRKNILTELSNLDKKDKNNLEKLNKMKSLQISKMNEMVCGT
VWDFPCNISPCGGALCRDKFGRRKCGGPDCNGALPIARDGLKKANETDAKLKSVAIHLLE
AEKQIQHIRQLAEDTKLKASRLDKTLSKAISRMEADKNRSKELIKNVKDFLLDSIPVYQC
QGKSGSKPKKPQNVDATINPEEIEKIANEVLAIKLPAAPYDLINILNKIKKMCDEYQQNK
KKLQKQLEDVKKLTQQANNARKAVDNLPSTYEITNNLNQAENIQKKTSSVLNNVNKNIKD
IRNRLSQAKNKADMTDKTYKEIKDLHSQLEAKIAELQEKMLQNRNAAAKAEKGASSALKA
ADESENSLNDLKEKYEILKEKLKKREIPPEILDRLQQLKEDAEDFAKEIDEKMNRIADLE
ERIDDLNNLNEEKANQLLELEKKAIKLKDDILTEENKHATCRE
NT seq
6432 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgaatccacgtcttggtaatcattctctgcttagcagagctgataagtcttgga
aatgcacagggcagctgtgcagatggatcttgttatccaaccattggggatcttcttgtg
ggacgtaataagcagatctcagcttcctcaacatgtggacaggatgaacctcaaagatat
tgcatcatcagctatctagaggatgatcagaaatgttttatgtgtgattccagatatcca
tatgatccttataatcacccaaacagtcatcagattgaaaatgttataacaacatttgat
tcagattggaagaaaaagtggtggcaatcggaaaatggcattgatttcgtcagcattaga
ctggacttagagacactgtttcagttcagccatctggtgattaccttcaagtcatttcgt
ccagcagccatgctggttgaacgatctcgtgactttggacaaacatggaaagtatttaaa
tactttgctctgaattgtgcgtcagcttttcctggaattccagaaggccatgctgatgat
gtcggagatgtggtttgtgactctaggtattcagacatagagccatccacagaaggagag
gtggttttaaaggcactcgatcctagttttgacattgatgatccttacgatccatatata
caggatatcattactctcactaatataagaatcaactttacaaagctccatacctttggg
gacacacatagcaacggatggcagagtgagctccaagagaaatacttctatgggatatat
gaaatgatattgaggggaaactgtttctgcaatggacatgccagccaatgtgttcctgtg
gataacacgagaggtgatgtgttcagtcagcctggaatggttcatggtaaatgtgtctgt
cagcataacacagatggcctcaactgtgaaaaatgtaaagaattttataatgatgcacca
tggagcccagcagttggctttcaagacaatgcatgcagacaatgcaactgtaatggacac
tctgataaatgtcactttgaaataaaagtctatgaagccagtaatggcaccagtggtggt
gtttgtgacaattgtcagcacaatactttaggaaatcattgtgaattctgcaagccatac
ttctatcatgatcctcttaaagattcttctgacccaaatacctgtataccatgtgactgc
gacccagatggaacacatggtggaggaatatgtgagggtcatacaaatcgcagactggca
atcattgcagggacatgcttatgcaaacaaaatgtagaaggaaaacgctgtgatcagtgt
aaaccaggatactttggactgagtgctaccaatttttggggttgtcagtactgtggttgc
aatcaatttggatccctaccatcctcaatctgtgatgctattactggacaatgccaatgt
cagaattttgccacaggccaatactgtgatgagtgcatggctggttattgggggcttggg
aacagcctgcacccttgttctgcatgtagctgtgatataggaggagcacacagcgttgta
tgttctcagagtactggtcagtgtgactgccttcctaatatagtgggtcttcagtgtaag
cagcctgctgatggatattacttcatacccctggactattacatctacgaggcagagaaa
gcacaggcactctctggttcagcaaccataattaatccaacacctgtgccaaaatgccag
gattatttcattaaacaaggaatagattttcgttttgaaaatgacagaataatacttaaa
tcaatgccaaagagaagtgtaagaagaagacggcaggcacaggaagttgtcccatttggt
acagaaggtgttgtagaacttgtattaaggcagccaacaccagggaaaccagtaacatgg
acaggacctggatttgcacgtgttctgcatggcgctggactgagatttactgtcaataac
attccatactctatggatttccttattgcaatccgatatgagccagagtcattggaagat
tggacagcaagaattatggttaacctcccaaaggatgggttaagtgaacactgcaaaacc
aacaaacctctaccggaaggatatacgcttcaattgcttgccactaacaggattgcactg
ctgaatacatctgtgtgcctggacccagacagagaatacctaatagatgtttatttcact
caagtatcaaatattcatacaaataagcaatatattcttgttgattcacttggactgatt
ccccagatttcatctctaagcaatctctgtactgaagcgcaattagaagaatatgattat
tataactgcattgaaattgctgctgacattggaacagcaattctgccagatgtctgtgag
aagcttattattagcatgtctgcgcgtatccacaatggtgctgttaagtgttcctgtaat
tctgaaggatcgttaagcaatcgttgcagcaaaattggtggtcaatgtaaatgcaagccc
aatgttgttggaagctgttgtgataagtgtgctgtgggcagctatggatttggtcccact
ggatgtgtaggttgcgactgtcatatcaatggttcaatgagcacattgtgtgaccagatt
actggacaatgtgcttgtcgcaaggatatccagggtcgccgttgtgatcgctgccttcct
ggatactatggatttccaaactgtagaccttgcaagtgtaatgggaattcagactcatgt
gatccaataactggggcctgcaagagctgcaaaggatttgcaacaggcaccaactgtgaa
cggtgtctcgataattactttgggaatccattaagtggacaaccatgccagccatgtatg
tgtccaggttctcctacaagcggccaatattttgcatattcctgtcaacaaaaccctgat
accctagaggtgacctgcaattgtctagagggttacacaggaaagaactgtgatgagtgt
cctgttggtttttatggaaatatagaaaaaggagaaacatgtttaccatgtcagtgcaat
aacaatatagatataaaagaccctaacgcatgtgataaagtcacaggggagtgtttaaag
tgtttaaataacacatatggacgccattgtgatcgctgcccccctgcatattatggatat
ccaaattgtagaccctgccggtgtagtggcaattcggactcatgtgatccaacaactggg
gcctgcaagagctgcaagggatttgccactggcaacaactgtgagcggtgtctcgataat
tactttgggaatccattaaaagggcagccttgccgcccatgtatgtgtccaggttctcct
acaggcaaccaatattttgcacattcctgtcaacaaagtcctgaaaccctagaggtgacc
tgcaactgtttagaaggttacacaggaaagaactgtgatgagtgtcctgttggtttttat
ggaaatatagaaaaaggagaaacatgtttaccatgtcagtgcaacaacaatatagatata
aaagaccctaacgcatgtgataaagtcacaggggagtgtttaaagtgtttaaataacaca
tatggacgccattgtgatcgctgccctcctgcatactatggatatccaaattgtagacct
tgccagtgtagtggcaattccgagtcatgtgatccaataactggggcctgcaagagctgc
aagggatttgccactggcaacaactgtgagcggtgtctcgataattactttgggaatcca
ttaaaaggacagccttgccgcccatgtatgtgtccaggttctcctacaggcaaccaatat
tttgcacattcctgtcaacaaaatcctgaaaccctagaggtgacctgcaactgtttagaa
ggttacacaggaaagaactgtgatgagtgtcctgttggtttttatggagatttaaaacaa
ggagaaaaatgttcaccatgtcagtgcaataaaaatatagatataacagatcctgaggca
tgtgatagtgtcacaggggagtgtttaaagtgtttgaataacacatatggacgtgactgt
gcttcctgcctaccaggatactttggatctggacgttatcagaattgtacaagctgtgtc
tgcaactccacgggaacaaaggatgagacctgctcaatttatgaggaggttggggaatgc
gtatgtgacagaactacaggacagtgcccttgtttgcctaatgtaattgggattcggtgt
gacaactgtgctcctggctactggggcttttccagtggaaaaggatgtaaaccttgcaac
tgttccctgaataattcccaagaaaagcaatgcaatcagtttacaggtcagtgcctatgc
aaaccccaatacaaaggaaagaaatgtgaccaatgtgaagaaaatttttatggaaatccc
aaggtgaaatgcataccttgcaggtgcaatttgaaaggcagtaataagcctatgtgtgat
aaagacaccggggcatgcaactgcaaagtaggagttactggaagatactgtgaccaatgt
gctcctaaattcaagcaagagttcccagcctgccctcgatgccatatgtgctttgacgaa
tatgaagctgatgtatcctccctggctgactctgttcatgacttagttaaattagctgcc
aacattggccccaccagatcgccaatgggctgtgatgttcagatgagcattctaaaggat
agactttctgttattgagaaaatgtttaagagtcgaattctttctcctgacaagtatgca
aaagtcaaggacttctacgaaagtataaggaataaagtaaataaaattaggatttcagat
ttgggaaaattcagtgagataccaaagctgaataaaacaatatgggatatggagaaagag
attgatgttttatttaaaaacctagacataataaggataaagaagcagaaggaaaatata
gtcaaggttaaagacatccaagcatatgttgacaagatcaccaaacactataaaacatca
ttatctgcagcagagaaggcacgcaacgctacacctattatccggactgcttccaaaact
agaaaaaatattctgactgaactcagcaacctagataaaaaagacaaaaataatttagaa
aagttaaacaaaatgaaatctctgcaaataagtaaaatgaatgaaatggtttgtggaact
gtatgggactttccttgcaatatttccccctgtggaggtgctctatgcagagataagttt
ggcagaaggaaatgtggtggaccagactgtaatggagctttgccaattgccagagatggt
ctgaaaaaagcaaatgaaacagatgctaagttaaagagtgttgcaatacatctccttgaa
gctgagaaacagattcagcacatcaggcagctggcagaagatacaaagttgaaagcctcg
agactcgacaaaaccttgagtaaagccatcagtcgtatggaggcagataaaaatcgttcg
aaagagcttataaaaaatgttaaagattttcttcttgacagcatacctgtataccaatgc
caaggaaagagtggaagcaagcctaagaagccacagaacgttgatgctactattaaccca
gaagaaatagaaaagatagctaatgaggtccttgcaataaagttgccagccgcaccatat
gatttaatcaatatactgaacaagattaaaaaaatgtgcgatgaataccaacaaaacaag
aaaaaacttcaaaagcagctggaggatgtaaagaaacttacacagcaagcaaacaatgca
agaaaagcagtcgataaccttcccagtacatatgagatcacaaataatttaaatcaagct
gaaaatatacagaaaaaaacaagctccgtgctgaacaatgtaaacaagaacattaaggac
atcagaaacagactttcacaggctaagaataaggcagatatgactgataagacatataaa
gaaataaaggatcttcactcacagttggaagcaaagattgcagagcttcaagaaaagatg
ctacagaacaggaatgcggcagccaaagcagagaaaggcgcaagttctgcattgaaagca
gctgatgaaagtgaaaatagcctcaatgaccttaaagaaaagtatgagatactcaaagaa
aagctaaagaagagagaaatccctccagaaattttggacagattgcagcagctaaaagaa
gatgcagaagattttgcaaaagagattgatgaaaaaatgaatcgcatagcagatttagaa
gaaaggattgatgacttgaacaacttaaatgaagaaaaggctaatcaactgctagaacta
gagaagaaagccataaaactaaaagatgacatcctcacagaagaaaacaaacatgctaca
tgtagagagtag
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