Rana temporaria (common frog): 120931829
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Entry
120931829 CDS
T07929
Symbol
TRIM36
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36 isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120931829 (TRIM36)
04121 Ubiquitin system [BR:
rtem04121
]
120931829 (TRIM36)
Enzymes [BR:
rtem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120931829 (TRIM36)
Membrane trafficking [BR:
rtem04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
120931829 (TRIM36)
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120931829 (TRIM36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
COS
zf-RING_UBOX
ANCHR-like_BBOX
SPRY
fn3
zf-C3HC4
zf-RING_5
zf-C3HC4_3
Interfer-bind
zf-C3HC4_4
zf-C3HC4_2
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
120931829
NCBI-ProteinID:
XP_040199625
LinkDB
All DBs
Position
1:complement(142725371..142855355)
Genome browser
AA seq
741 aa
AA seq
DB search
MIGSEEIHQFGFIVDTISRSQAVIRNIERELMCPSCKELYTHPLILPCQHSICHKCVKEL
LFLTMEDSTDVSSEVSSPGSPRGRIQSPSVERLDRILRSATHHRSYFIMRSRGSKRNSLT
PKITTLSCPGCLHDVDLGERGIHGLFRNFTLETIVERYRQAARAATAIMCDLCKPPIQES
TKSCLDCSASYCNECFKIHHPWGTVKAQHEYVGPTTNFRPKVLMCPEHESEKVNMYCEIC
RRPVCHLCKLAGSHANHRVTTMSNAYKTLKEKLTKGISYLISKESQVQTQISELQILIKR
TESNGERALEEATYNFEKLYNILEERKTFVLRSIQDCQATRLERLQNQMEEYQGLLENNG
LVGYAQEVLKETDHSCFVQTAKQLYTRIQKASESLKTFQPAADACFEDYLVDVSKEENLL
GDLSFNKALEMPEINEKESKIYNSAKICWRRPNDSGLADSYILEYRKLDKNEDPMWNEVE
TTSTNKVLSDLDLNSSYCFRVQGHKGSVCSPHSKEVILRTPPAPVFSFFFDDKCGYNKEH
LLLNDRRDTVESLAGLPLLLGAERVQVGCYMCLDYIIADVGITKGKYFWAFSVEPYSYMV
KVGVASDIKLQEWLHNPRDISSPRYDQDSGHDSGSEDVAFDASQPFTLATIGMKKFVIPK
ASNVSTAYNERTIPLPSRIGVCLDYDKGKVGFYDADTMKCLYERDVDCIGTMYPAFALMG
GGVIRLEEVMSAKQLDYSQEM
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgattggctccgaagaaatccatcagtttggcttcattgtggatactatctccaggagc
caggctgtgattagaaatattgagcgagagctgatgtgtccatcctgcaaggagctgtac
acccatcccttgattttaccatgtcagcacagcatctgtcacaagtgtgtaaaggagctc
ctcttcctgactatggaagattccaccgatgtcagttcagaagtgtcctcaccaggaagt
ccacgtggtcggatacagtcacctagtgtggaaaggctcgaccgaattctcagatcagcc
acgcatcatcggagctattttataatgagaagcagaggttctaaacgcaattcgctgact
cccaagatcacaactctatcatgtcctggatgtttgcacgatgtggacctcggagagcgc
gggatccatgggctctttaggaactttaccttggagactattgtagaacgctatcggcag
gcagctcgtgctgccactgcgatcatgtgtgatctttgtaaacctccaattcaagagtcc
accaaaagctgcctggattgcagtgctagctattgtaatgagtgctttaaaattcaccat
ccctggggaacagtcaaagctcagcatgagtatgttggacctacaacaaacttcagacca
aaggtgcttatgtgtccagaacacgagtccgaaaaggtgaacatgtactgtgagatctgc
aggaggcccgtgtgtcacttgtgtaaacttgcaggttcacatgctaaccaccgagtgaca
accatgagcaatgcctacaaaacattgaaggaaaaacttacaaaaggtatcagctatctt
atcagcaaagaaagccaagttcagacccaaatttctgaactgcagatcctgataaagcgc
actgagagcaatggagagcgagctttagaggaagcaacatacaactttgaaaagctatat
aatattttagaagagaggaaaacatttgtgctaagatctatacaggattgccaggctact
cgactagaaaggctgcagaaccaaatggaggaataccagggtctactggagaataacggg
cttgtgggctatgcacaggaagtgttaaaagaaactgaccactcatgttttgttcagact
gcaaagcagctgtatacaaggattcagaaggcatcagaatctctgaaaacttttcaacca
gctgcagatgcctgctttgaagattatttggttgatgtttccaaggaagaaaatctgctt
ggtgacttgtcatttaataaagctctggagatgcctgaaattaacgaaaaagaaagtaag
atctacaacagtgctaaaatttgttggaggaggcctaatgactcgggtcttgcagacagt
tacattcttgaatacagaaagcttgacaaaaatgaagatccaatgtggaatgaagtggaa
acaaccagtaccaacaaagtcctgtctgatctggatctgaacagttcctactgctttaga
gtgcagggacacaaggggtccgtgtgtagtccccacagcaaggaggtcatactaaggacg
ccccctgcaccagtgtttagtttcttttttgatgacaagtgtgggtacaacaaagaacat
ctcctgttaaatgacagaagggacactgtggaaagcttagctggccttcctctgctactt
ggagcagagcgagtacaagtgggctgctatatgtgcctggattatatcattgctgatgtt
ggcataactaagggaaagtacttctgggccttctctgtagagccttattcatacatggtc
aaagtcggcgtggcatcggacatcaaattgcaagaatggctgcacaatcctcgtgacatc
agcagcccaaggtatgatcaagacagcggccatgacagtggcagtgaagatgttgccttt
gatgcatctcaaccatttaccttggcaactataggaatgaagaagtttgttatcccaaag
gcctctaatgtttcaacggcttataatgaacgcaccataccccttcctagccgaatcggg
gtttgcttggactatgataaaggaaaagttggcttttatgatgcagacaccatgaaatgc
ctttatgagagggacgttgactgcatcggaacaatgtatcctgcttttgccttgatggga
ggtggagtcattcgtttggaggaggtcatgtctgcgaagcaactggactattctcaagaa
atgtag
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integrated database retrieval system
