Rana temporaria (common frog): 120931958
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Entry
120931958 CDS
T07929
Symbol
DMXL1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120931958 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120931958 (DMXL1)
Membrane trafficking [BR:
rtem04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120931958 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
120931958 (DMXL1)
RAVE complex
120931958 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_WDR19_2nd
Beta-prop_Vps41
Beta-prop_LRRK2
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
120931958
NCBI-ProteinID:
XP_040199913
LinkDB
All DBs
Position
1:147974190..148186457
Genome browser
AA seq
3056 aa
AA seq
DB search
MNLHQVLPGAVNPGDHCFSVGSLLEQPITAYASGCDVVILGSDFERLQVIPGVQHGNVLV
GCVDCSMQQGRIAASYGNVICIFEPVNLLKQKSSPSQGSRTQWQKSGHIVLDSVAHDLTW
DPTGTRLLTGSSSLQLWSSTSLDKRSNEDGQENTDADFANWKCVWQCRTAFSVHLMKFSP
DGEFFATAGKDDCLVKVWYNTESWHSAVTSPLTSPEKEGQGEVDFSFIYLAHPRAVNGFS
WRKTSKFMPRGSVCNVLLTCCKDNICRLWTETLLPNDSLLCGDGFNQKVEPDGLNNFKRN
PSNKERVQSAIELNLRHFRRGRKRSLCLVAHTGYPPHQHDAHDVHRNTPHNGNALCHFHI
AASINPATDIPLLPSISSMSLSETEEKSGPFVVHWLNNKELHFSLSMEVFLQQLRKSWEQ
QSSEACIDEANQEEGNSEEDEDNEEADSKLPNEKKEVNGVKPVVHSSSSVSFPSSVIDHE
IEILLSEWNKNPDMLFSIHPVDGSLLVWHVDWLDEYQPGMFRQVQVSFSCRIPVAFPTGD
ANSLCRSIVMYASTKNVDLAIQQGKQKPASMARSTSMLISAGQSKSSSLKLSIFTPNVLM
ISKHADGSLNQWQVSFAEESAFSTVLSISHKSRYCGHRFHLNNLACHSVLPLLLTTSRHN
ALHLTKVNGDTGTPNSLQDGDSSINDNGEEASESYQDPNAVYSELILWRVDPVGPLSFSG
GVSELARINSLHGSAFSNVAWLPTLIPSYCLGTYCNSPSACFVASNGQNLRLYQAVIDAK
KLLCELSNPDISTYVGEVFNIISQQSTARPGCIIELDAITNLDGRKTQLLHVFQEDFIMA
NQENETTGTSGISSNSERSHNDFSEKFFLVVIECTKEKRSILHMWKLHLKSVPVSVEDRS
NTSDNVPPKEDSFSSASGEKVQSPLTQRYQTCKANLQSTSKMTLSSELVYSQELSLPDAV
EVISVKPSAGHLSSSSLYPVSNAPYLLATSCSDDKVRFWRCRVESELSLSPTDIENCVAY
IWEEWPLLIEDGLQNGAVSVPGRPIEVSCAHTNCLAVAFKQAPSKHNASQEFLMHVSIFE
CESTGGSCWILEQTIHLDELSTMLEPGISVDNNLVAYNKQDLFSSSNKQLQHSTKHLVHL
DWMSREDGSHMLTIGIGTKLLMYGQVARKAQESSCKESFALQLWDTAKTTAQPRFVLLRC
VDLVSSVEGSLPLPVSLSWVRDGILVVGMDCEMHVYSQWQPFSKQDSASTESYNGSTPSL
TNLVKQSHSVPSGLNPPKKTMTRSMTSLAQKLMGKKTAFDLPVEMEDYGLFEAAHALFPT
LPQYHPLQLMELMDLGKVRRAKAILSHLVKCIAGEVVAINDNEPNHERRLRSLSISASGS
TSRDPKTFSKPESADYTEIDSVPPLPLYALLAADEDTSFVSTVEMTSNQNNSNKQRDNSK
NAENYDELFQVPTIGSEELTTLESEEDNTKPQVIDLSQYSPTYFGPEHSKVLSKHLLHSS
LPGMTRIEQMSLMALADTIATTSTDIGESRDRSQGGETLDECGLKFFLAVRLHTFLATSL
PPAYRIQLSHQGLSTSHFAWAFHSVAEEELLATLPPMQKGDPSWAELRAMGVGWWVRNAN
SLRKCIEKVAKAAFQRNNDPLDAAIYYLAMKKKAVIWGLYRSQKDTKMTQFFGHNFSEER
WRTAALKNAFSLLGKQRFVHSAAFFLLAGSLKDAVEVCLEKLHDIQLALVISRLYESEFE
KSSTYKSILQKRVLGIASHGREPSLSNMHADPFVRSMAYWILEEYKHALDTLLKQLVRNK
EDDSWSLSSSCDPSVFNFYNFLRTHPMLLRHNFGSSESPSTKVCLSMENALADKINLSER
RLFFTTAHAHLKAGCPMLALEVLSKMPKVVKKSKPLLRTSSLADTSKVSTPVSPLHEEKK
DSACDFDWSSSMVNGLSDLSSTKQTHSVSSLDWSQPSIIIEDEPLELEWDSETESEASGL
SMKHVKPSQSTESNKQVMTGESYSDSCSIDENDFLSPTEDVIAAQLKFRACLKILTGELR
TLSTGYEVDGGKLRYQLYSWLERAVVALQKICKYCVNVDDLSSVGADEYSYNDSLDDSLD
QATSKQRKELLERRQWLLKFQSLLRMFLSFCVLHGSHGGGLASVRMELILLLQESQQDSS
LLSNPQTEQTSIPLLFACTASAKTVVANPLQHLSNLTHDILHAIINLDSPPHPDIQNNKI
YVMHTLAASLSACIYQCLCGGQANSASMQTNPFTGMAYQSVLLIHRQPIRTTSLDEAVIP
NTSPTHWPGITSLIRLLNSAGEEAQPGLTILLCEILTAVYLSLFSHGLATHSSQELFCVV
AHPLNDKMWSAVYGGGARIPCRGQMPVKPVTGKYFSIPSPHQVVVFSMECVGFTKALTAI
STHSPPSPAVVVSPSIEESDQIKRIKSSTILQSKESPSTFASPVLEQGSSIFREKFIPPE
LSIWDYFIAKPFIPLLQNRLEYDSEDSQGSNDEDDDDVSLSEVQVQEHSNPNSYSWALMR
LAMVQFVLQNLKGFYPLAGHDLSDLPVASPLCHATLKTLQRWEQVLLRRLEIYGGPPQDF
ITMPSTDEVPSAGPAILRHKALLEPTNSPFKSKHSSTLPVKRLWQYLVKQEGIQETFIRN
IFTKKRSLNETETDQGSSGGRARIIHKESDIITAFSVNKANRNCIAIASSHDIQELDVSA
ILATQIYSWIDEDFETENKGSDDFLVVHTRDDISPAQASTPYTHSNPGTPINMPWLGGFQ
TGRGASVLIKRTIKDVRRMASHPTLPYYLTGAQDGSVRMFEWGHAQQITCFRAGGNSRVT
RIKFNHQGNKFGVVDADGFISLYQTNWKYSAASGSLAKPYLTWQCHNKTTNDFVFVSSSS
LIATAGQSSDNRNVCMWDTLVAPANSLVHAFTCHDSGATVVAYAPKNQLLISGGRKGFTC
LFDLRQRQQRHVFQSHDSAVKAIAIDPTEEYFITGSAEGNIKVWSLSNFTLLHTFLNEHA
RQSLFRNIGTGVMQIETGPANYIFSCGADGTVKMRTLPDRFSTVNDPLRNHVKFFL
NT seq
9171 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcaccaggtgctgcccggagccgtcaacccgggggatcattgcttctctgtg
gggagcctgctggagcagcccattacggcttacgcatctggatgtgatgtggtgattctg
ggaagtgattttgaaaggctacaagtgatccctggagttcaacatggaaatgttctggtt
ggctgcgtggactgttctatgcaacagggcaggattgcggcttcgtatggcaatgtgatt
tgcatctttgaacctgtgaatctgttaaaacaaaaaagttcaccgtcacaaggaagtcgt
acacagtggcagaagagtggccacatagtattggattctgttgcacatgatttaacttgg
gacccaacaggtacacgcctactaactggatcaagcagcctacagctatggtctagtact
tctttggacaaacgatccaatgaggacggtcaggaaaacacagatgcagactttgcaaac
tggaaatgtgtctggcagtgcagaacagcgttttctgtgcatttaatgaaattttcccct
gatggagaattttttgctactgctggcaaggatgactgcctggttaaggtttggtacaat
accgaaagctggcattctgcagttacatctcctcttacaagtccagagaaagaaggtcaa
ggagaagtagacttttctttcatctatcttgctcaccctagagcagtaaatggattttct
tggcgaaaaacaagtaaattcatgcctcgaggatctgtgtgtaacgttcttctgacatgc
tgcaaggacaacatttgccgtttgtggacagagacactactgcccaatgatagcctgtta
tgtggagatgggttcaatcaaaaggttgagccagatggcttaaataatttcaaaagaaac
ccttcaaataaagagcgagtacagagtgcaatagagttgaacttgaggcattttcgtaga
ggcaggaagagatcattatgcttggtggcacacacaggatatccacctcatcaacatgac
gctcacgatgtacatcggaacaccccccataatggcaacgcactttgtcactttcacatt
gcagctagcatcaaccctgctacagacattcctcttcttccatctatttcatcaatgagc
ctcagtgagacagaagaaaaaagtggaccattcgtagtgcattggctgaataacaaagag
ttacatttttctctgtctatggaggtctttcttcagcagctcaggaagagttgggaacag
cagtcgtcagaggcttgtatagatgaagcaaaccaggaagaagggaactcagaagaagat
gaagataatgaagaagccgattcaaaattgccaaatgagaaaaaggaagtgaatggggta
aaacctgttgtacattcttccagtagtgtgtccttcccatcatctgttattgatcatgaa
attgaaatcttgctttctgaatggaacaagaatccagacatgctttttagtatccatcct
gtggatggctctttgcttgtatggcatgttgactggttggatgagtatcagcctggaatg
tttcgccaagtgcaggtatccttttcctgtagaattcctgtagcatttcctaccggagac
gcaaactccctctgtcgaagtattgtgatgtacgcaagcactaaaaatgtagatttagct
attcagcagggcaaacaaaagcctgcatctatggcacgatccacctctatgctcatttct
gctgggcaaagtaaatcgagcagtctaaagctgagcatctttactcccaatgtgttaatg
atatccaagcatgcagatggttccctgaatcagtggcaggtgagctttgctgaagaatct
gccttttccactgtgctcagcatttcccacaagtctcggtactgtggccatcgttttcac
ctgaataaccttgcctgccattctgttctaccactactgctgactacttctcgtcacaat
gcactgcacttgacaaaggtaaatggcgatactgggacacctaactctttacaagatgga
gatagttctataaacgacaatggagaggaagcatcagaaagttaccaggatcctaatgca
gtgtacagtgaattaatcctttggcgcgttgatcctgttggaccgctttctttttctggt
ggagtttctgagctggctcgtatcaattcccttcatggttctgccttctccaatgtagct
tggttacccacacttataccaagttattgtttaggtacatactgcaattctccaagtgca
tgttttgttgccagcaatgggcagaatttaaggctgtatcaggctgtaatagatgctaaa
aagctcttgtgtgagctgtccaatcctgatatatcaacatacgttggggaagtttttaac
attattagtcagcagtccactgctagaccaggatgtattatagaactggatgccattact
aacctggatggcagaaaaacacaactgttgcatgtctttcaagaagactttataatggca
aaccaggagaatgaaacaacaggaaccagcggcatttcgtctaattctgaacgctcccac
aatgatttttctgagaaatttttcctggtggtaattgaatgtaccaaagaaaaacgttca
atcttacacatgtggaagttacatctaaagtctgttcctgtctccgtggaggataggtcc
aacacatctgataatgttccacccaaagaagactcctttagttctgcttcaggagagaag
gtgcagtcacctcttacacaaagatatcaaacatgtaaagcaaatcttcagagtaccagc
aagatgaccctttcatcagagcttgtatacagccaagagttgagtttgccggatgctgtt
gaagtcattagtgttaaaccatctgcaggtcacctgagtagttcttccctttacccagtg
agtaatgcaccctatctactagcaacttcttgctctgatgataaagtcaggttttggagg
tgccgagtggaatcggagctttcactttctcccactgacatagagaattgtgtagcatat
atttgggaggaatggcctttattgattgaagatggtctgcaaaatggagctgtgagtgtt
ccaggtaggcccatagaagtcagctgtgcccatacgaactgtctggctgtagcattcaaa
caagcaccaagtaaacacaacgcttctcaagaatttttaatgcatgttagcatctttgaa
tgtgaatctactggtggctcctgttggattctggaacaaaccattcacttggatgaacta
agcacaatgttggagcctggcattagcgttgacaataatctcgtagcttacaataaacag
gatttgttctcatcttccaacaaacaactccaacatagtacaaaacatttggtccatttg
gactggatgtccagggaggatggctctcatatgttgacaatagggattggtacaaagctt
cttatgtatgggcaggttgctagaaaagcccaagaatcctcatgtaaagagagttttgcc
ttgcagctctgggatactgccaaaaccacagctcagccaaggtttgtattgcttcgatgt
gtggatcttgtgtcttctgtggaaggctctcttcctttaccagtgtctttatcttgggtt
cgggatgggattctcgttgttggaatggactgtgaaatgcatgtctactctcaatggcag
cctttttctaaacaagactctgcaagcacagagtcctacaatggaagcaccccatccctc
acaaacttggttaagcagagccattcagttccatctggtctgaatccaccaaagaaaact
atgacaaggtcaatgactagcttagctcaaaagcttatggggaagaaaaccgcatttgat
cttcctgtggagatggaggactatggactttttgaagctgctcatgctttatttccaact
ttgccacaatatcatccgttgcaactgatggaattgatggatctaggaaaagtacgcaga
gcaaaggctatattatctcatcttgtaaaatgtattgcaggagaggttgttgcaattaat
gataatgaacccaaccatgaacgcaggctccgttcactttcaatcagtgccagtggaagt
acttctcgagaccccaaaactttcagcaaaccagaaagcgctgactacacagaaattgat
tctgtgcctcctctaccattgtatgcacttcttgctgcagatgaggatacatctttcgtt
tccacagtggaaatgaccagcaatcaaaacaattccaacaaacaaagagacaacagtaaa
aatgcagaaaactatgatgagcttttccaagttccaacaattggctccgaagagctaaca
actttagagtctgaagaagataacacaaaaccacaagttatagacttgtcacagtacagc
cccacttattttggtcctgaacattcaaaagtgctatctaagcatttgcttcattctagc
ttacctggcatgacccgcatagaacagatgtctttgatggctttggccgatacaatcgcc
acaactagtacagatattggtgaaagcagagatcgcagccaaggtggcgagacccttgat
gaatgtggactgaagttcttcctagctgttcgacttcatacctttctcgctacatccctt
ccaccagcatatcgaattcagctttctcatcaaggcctgtctactagccatttcgcttgg
gcctttcattctgtggcagaggaagagctgcttgccacactgcctcctatgcagaaagga
gacccctcttgggcagagttgagagcgatgggagtgggctggtgggtaagaaacgcaaac
agcttgcgcaaatgtattgagaaggttgcaaaggctgcttttcagcgaaataatgatccc
ttagatgcagcaatttattacttggcaatgaagaagaaagctgtaatatgggggttgtat
agatctcaaaaagatactaagatgactcagttttttgggcataactttagtgaagaaaga
tggaggacagcagccctgaagaatgctttttctctacttggaaaacagcgttttgtgcat
tccgcagcatttttccttctagctggatctctgaaggatgcagtggaggtttgccttgaa
aagctacatgacattcagcttgcactggtgatatcaaggctgtatgagtctgaatttgaa
aaatcttcaacatataaatctattcttcaaaaaagagtgttgggaatagcgtcacatggc
cgagaaccaagtctctccaacatgcacgcagacccttttgtgaggagtatggcttactgg
atcctggaggaatacaagcacgctttggataccttacttaagcagctagttaggaataaa
gaagacgattcttggagcctgtcttcaagttgtgatccatcagtcttcaatttctataat
tttttaagaacgcatcccatgttattgagacataattttggttcttcagaatcgccctct
accaaagtgtgcctatctatggaaaatgctttggctgacaaaattaacctaagtgaaaga
aggttatttttcaccactgcccatgctcatttaaaagctggatgtccaatgctagccctc
gaggtattatccaaaatgcctaaagtggtgaaaaaatcaaagcctctacttcgaacatca
agtctggcagatactagtaaagtatccactcctgtatctcccttacatgaagaaaagaaa
gactccgcttgtgactttgactggtcaagctccatggtcaatggtttatctgacttatcc
tctacgaagcaaacacattctgtcagttcattagattggagccaaccatcaataataatc
gaagatgagcccttagaattagagtgggatagtgagacagaatctgaggcatctggatta
tcaatgaagcatgtaaaaccttcacaaagcacagaaagcaataaacaagtaatgactggt
gaaagttactcggattcctgtagcattgatgagaatgattttcttagtcccacagaagat
gtgatcgctgcccagcttaagtttagagcttgcctaaagattcttactggggagctgcgt
acattatccacgggttatgaagttgatggtggaaaactgagatatcagctgtatagctgg
ctggaaagagcagttgttgctcttcaaaagatttgtaaatattgtgttaatgtggatgat
ctgagttctgtgggagctgatgaatattcttacaatgatagcttggatgactctttggat
caagcaacatcaaagcagagaaaagaactccttgagagacgtcagtggctgttaaaattt
caatcactgttaagaatgttcctgagtttttgtgtacttcatggctctcatggtggtggt
ttggcctctgtacgtatggaattaatactacttttgcaggagtcacagcaggatagctca
ctcctttccaatcctcagacagagcagacttcaattccacttctttttgcttgcacagca
agtgccaaaactgttgtagccaatcctttgcaacacctgagcaacttaactcatgatatc
ttacatgccataataaatcttgattcaccgcctcatccggatatacaaaacaacaagatt
tatgtaatgcatactctagctgcatccctttctgcctgcatatatcagtgcctttgtgga
ggacaagccaacagtgcctccatgcagaccaatccattcacaggtatggcgtatcagagt
gttctgcttattcacagacaaccaataagaacaacaagtctggatgaagcagtgatacca
aacacatctcccactcattggccaggaattacttcattaattcgcttgctgaattctgct
ggagaggaagctcaaccagggctcactattctgctttgtgaaattctgactgctgtctac
ttgagtttgttcagtcatggactagccactcactccagccaggaattattctgtgtcgtt
gctcatcctctgaatgacaagatgtggtctgcggtctatggaggaggagcacgaatccca
tgcagggggcagatgcctgttaaacctgtcacagggaaatacttttctattcccagccct
catcaggtagttgtgttctccatggaatgtgttggctttaccaaagcccttactgccatc
agtactcatagtcctcccagccctgcagttgtggtatccccttctatagaagaaagtgac
cagattaagcgcatcaaatcttctacaatacttcagtccaaagaaagtccatctaccttt
gcttcaccggtgttggagcaggggtcgtctattttccgggaaaaattcatccctcctgag
ctcagcatctgggattactttatagccaagccttttattcctcttttacaaaacaggctt
gagtacgattcagaggatagtcaaggaagcaatgatgaggatgatgatgatgtctcatta
tcagaagtccaggtccaggaacactccaatcctaactcatatagctgggctctgatgcgt
cttgcaatggtacaatttgtccttcagaatttgaaaggcttttacccattggctggacat
gacctttcagatcttcctgtagcctcacccctctgtcatgccactcttaagactttgcag
aggtgggaacaggtgctcctgcgaagacttgaaatatatggaggtccaccacaggatttt
attaccatgccaagcacagacgaggttccgtctgctggacctgcaatcttgaggcacaaa
gcattgttggagccaacaaattcaccttttaaatccaagcactcaagtaccttgccagta
aagaggctttggcaatatctagtaaaacaagagggaatccaggaaacctttataaggaat
atttttacaaagaaaagatctttgaatgagacggaaacagatcagggttcttcaggcgga
agagcaagaataatccacaaagagtctgacataattactgcattttcagtaaataaggcc
aacagaaactgcattgctattgcttctagccatgatatccaggaacttgatgtctctgca
attctggctacccagatttactcctggattgatgaggactttgaaactgaaaataaagga
tcagatgacttcttggttgtacacacacgtgatgatatctcacctgcgcaggcatccact
ccttacacccacagtaacccaggcacccctataaacatgccttggctaggaggatttcag
actggaaggggtgcgtctgtgttgataaagagaacaatcaaagatgttcgaagaatggca
tcacatccaacactgccttactatcttactggtgctcaagatggcagtgtaagaatgttt
gaatggggtcatgctcaacagataacatgcttccgggcaggtgggaattccagggtaaca
cggataaagtttaaccatcaagggaacaagtttggagttgttgatgctgatgggtttatc
agtctgtatcagaccaactggaagtatagtgctgctagcggaagcctggctaagccttat
ttgacctggcagtgccataacaaaaccaccaatgactttgtgtttgtaagttcctcttcc
ctaatagctacagctggacagtcaagtgataacagaaatgtctgtatgtgggataccctg
gtagcacctgccaacagtttagttcatgcctttacttgccatgacagtggagcaactgtg
gttgcttatgcaccaaaaaatcagctgctaatatctggaggcaggaaaggattcacatgt
ttgtttgacttgcgtcagagacaacagaggcatgttttccagagccatgattctgccgtg
aaggccattgctatagacccaacagaagaatatttcattacaggatctgcagaaggaaac
attaaggtctggagcctttcaaatttcacgttgttgcacacttttctcaatgagcatgca
cgacagtccctcttcagaaatattggaacaggggtgatgcagatagagactggaccagcc
aactacatcttttcatgtggcgctgatggcactgtcaaaatgagaacattaccagatcgt
tttagcacagtaaacgaccccctaagaaaccatgtcaaattttttctttga
DBGET
integrated database retrieval system
