Rana temporaria (common frog): 120931979
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Entry
120931979 CDS
T07929
Symbol
CNOT2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120931979 (CNOT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120931979 (CNOT2)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120931979 (CNOT2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120931979 (CNOT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
120931979
NCBI-ProteinID:
XP_040199941
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Position
3:complement(192244553..192337138)
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AA seq
564 aa
AA seq
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MLLPALQITQEAGDGNGSRACLAPSVTYSMFGASRKKFVEGVDSDYHDENMYYSQSSMFP
HRSEKDMLASPSPSASGQLSQFGASLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPNH
VTPTTGVPTMSLHTPPSPSRGILPMNPRNMMNHSQVGQGIGMPSRTNNMSSSGLGSPNRS
SPSIICMPKQPPSRQPFTVNSMSGFGMNRNQAFGLNNSLSSNIFNGTDGSENVTGLDLSD
FPALADRNRREGSGNPTPLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALPGSSYK
DPTSSNDDNKSPSSPFFFVFVCMQNLNTPGKTVSTTDGPKFPGDKSSTTQNNNQQKKGIQ
VLPDGRVTNIPQGMVTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLY
PKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVL
QLLAAVELFNRDWRYHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHL
EYDKLEERPHLPSTFNYNPAQQAF
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttcctgcattgcagattactcaggaagctggggatggaaatggaagcagagcc
tgcctggcacctagtgtgacatacagcatgtttggtgcttcaagaaagaagtttgtagaa
ggagtcgacagtgactaccatgacgagaatatgtattatagccagtcgtcgatgtttccg
catcggtcggaaaaagatatgctggcatctccatcaccatccgcgtcgggtcagctgtcc
caatttggggctagtttatacgggcaacaaagtgcactaggccttccaatgagggggatg
agcaacaatactcctcagttaaatcgcagcttatcacaaggcactcagttaccaaaccat
gtaacgccaaccacaggggtaccaacaatgtcacttcatacgccgccatctccgagcagg
ggcattttaccgatgaatcccaggaatatgatgaaccactcacaggttggacagggcatt
ggaatgccaagcaggacaaataatatgagcagttcagggttaggcagtccaaacagaagc
tcgcccagcataatatgtatgccaaagcaaccgccatcccgacaaccttttactgtgaac
agtatgtctgggtttggcatgaacagaaatcaggcgtttggtctgaacaattcgttatcg
agtaacatttttaatggaacagatggcagtgaaaatgtgacgggtttggacctttcagat
tttccagcattagcggatagaaatcgaagggaaggaagtggtaacccaactcctttaata
aatcctttggctggaagggctccctatgttggcatggtaacgaaaccagcaaatgaacag
tcgcaggacttctcaatacacaacgaggatttccctgcattaccaggctccagctataaa
gatcctacatcgagcaatgatgacaacaaatctccctcttctccctttttttttgttttt
gtttgcatgcagaatttaaatacgccaggaaagaccgtttcaacaacagatggacccaaa
tttccaggagataaaagctccacgacgcaaaataataaccagcagaaaaaagggattcag
gttttacctgatggccgcgttaccaacattcctcaaggtatggtgacagatcagtttggc
atgattggcttgttaacattcatcagggcagctgaaacagacccagggatggtacatctt
gcgttaggaagtgacttgacaacactaggcctcaatctcaactctccagaaaatctttat
ccgaagtttgcatcgccatgggcatcctcgccgtgtcgaccacaagatatcgatttccat
gtcccttctgagtacttaacgaacattcacattagggataagttggctgcaataaaactt
ggccgatatggagaagatcttcttttctatctatattacatgaatggaggggacgtttta
cagcttttagccgcagtcgagcttttcaacagagactggagatatcataaagaagagcgg
gtatggataaccagggcacctggaatggaaccaacaatgaaaacaaacacatacgagagg
ggaacatattacttctttgactgtcttaactggaggaaagttgcaaaggagttccatttg
gaatatgacaagctagaagaaaggcctcatctgccatccaccttcaattacaatcctgct
cagcaagccttctaa
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