Rana temporaria (common frog): 120932522
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Entry
120932522 CDS
T07929
Symbol
PCDH12
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtem04515
]
120932522 (PCDH12)
Cell adhesion molecules [BR:
rtem04515
]
Cadherins
Protocadherins
120932522 (PCDH12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
DUF6479
Prominin
TMEM154
Motif
Other DBs
NCBI-GeneID:
120932522
NCBI-ProteinID:
XP_040200901
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All DBs
Position
3:complement(327371644..327389580)
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AA seq
1180 aa
AA seq
DB search
MALTLRVIGHLLHFLLLCCFHRSCQNSVSLMVRFRIQEEVPLGTVIGHISDASGWIEDAN
EEYQLIQETNTFPVQVGLKNGSITTTDRLDREELCKVHGRCILSFNVLATKALALVHVEI
EVLDINDNEPMFPKAELDVEISESASLRTRIPLDRAWDPDFGSNAVKLYTLSPNEHFTLD
IISSSDGVKHPELVVVKELDRELQSSFELVLTALDGGYPPKTGTTQVRIIVLDSNDNSPM
FEESSVTLEISEDTSPGTLLINLTATDPDQGPNGEIEFSFGKHTPHHFLNMFSIDPKLGE
IFLKQPLDYESRHSYELDVQAKDLGPNPIPTHCKVVIKVLDINDNTPDIKVTWASQDSPE
IIVSEAVPLGSFVALVMAHDPDSGANGDVHCHLVQDHEHFKLQKAKGNSYILTTNVILDR
EKWDVYDITIQAQDQGEPSFTSKKSLKIFVRDANDNAPVFQRPVYDVSLYENNSPFTHLL
TVNAQDADVGKNAEVTYKIIDSIISGIPLSTFVTVHSKTGEIVVLKAIDYEEIKEMQFLV
QAEDNGDPQLSSNASVKVLIRDQNDNSPLIVQPQLKKGHATITILVNAESGYFLSASEVT
SSEALGYTSDEILSETAKLNKHPIFQVIATDADSDGNARLVYHLLDDYLGLFAMDEHLGY
IYINSSNASNLIGNAIDLQVTVRDCGIPYQETKAKLTIMFGSHLDHLKNSASETNGKLSL
SVVIVICLAVLLVVCLLILALIMSYCRVDRKDNRAYNCREEESAYRKQPRRPQKQIQKAD
IHVVPVLRGRQQPQPVTPVEEAKLFPLPEEGQEVPEDQTLHTPFHLTPTLYRTLRHQHNQ
EILSEDTTDLEQSFSLPPSVCRTLQYQRQRSYSRENFEDPSGTLPVSNTTLKNPGSPQIR
VHDNFSPSEPIVYNGENFPPATSPTLRRQKNVEQSSKEQILRSLVRLSMVALAEKEGVDV
TMQSPHVQQISQLLSLLHQGQVHPKTLHRGNKYSSKAGRTAGQETDWQSTKDSGHGESEA
GDLDSESGGDFSTSHNFLEDNFEALLGPNGSSEGNCMSDLDPGWIARLSLPLANSYKENL
FTPNNQIALEPPITATEKEDLRTFLTFGKLTDGSQDNRLASTFLSEMSTLFEMLLTQKAE
AHGDTDSEVLMRLSGSSKSLGMDSRRDGTRNLMKDYENHH
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggctctgacattaagggtcattgggcacctccttcattttctactactttgctgcttt
cacagaagttgtcaaaattcagtttctttaatggtgagatttcgaatccaggaggaagta
ccccttggcacagtcatcggacacatatcagatgcatcgggttggatagaggatgcgaat
gaagaataccaacttatacaggagaccaacacttttccagtacaagtgggtttgaagaat
ggatctataaccaccacagatcgtttagatagagaggagctttgtaaggttcatgggcgc
tgcatcctatcttttaatgttttagcaaccaaggccttagctctggtccatgtggaaatt
gaagttctggacatcaatgacaatgaaccaatgtttccaaaagctgaactagatgtagag
atctctgaaagtgcttccctacgtactaggattccacttgacagagcttgggaccctgat
tttggcagcaatgctgtaaagctatatactctctctccaaacgaacacttcaccctggat
attatctccagttctgatggcgtaaaacatcccgaattggtggtggtgaaagaactggac
agggagctgcagtcttcttttgagcttgttttaacagcattagatggaggatacccacca
aaaaccgggacaacacaggttcggataattgtcttggactctaacgataatagccccatg
tttgaggaaagctctgtaactttagaaatctcagaagatacatcacctggtacacttctt
ataaatctaacagctactgacccagatcaaggtccaaatggggaaattgagttttcattt
ggcaaacatacacctcaccattttcttaatatgtttagcattgatcccaagttaggggaa
atatttctgaagcagccacttgactatgaaagcagacattcctatgaattagatgtgcaa
gcaaaagacttaggccctaatcccattcctactcactgcaaggtagtcattaaagttctg
gatattaatgataacacccctgatattaaagtcacatgggcttctcaagattctcctgag
atcattgtgtctgaagctgttcccctaggcagttttgttgctttggttatggcgcatgat
ccagattcaggtgcaaacggggatgtgcattgtcacttagttcaagaccatgaacatttt
aagcttcaaaaagctaaaggaaacagttatatactaacaaccaatgtgattctggacagg
gaaaaatgggatgtgtatgacataacaatccaagcccaagatcaaggtgaaccatctttt
acatctaagaaatccttaaaaatatttgttcgtgatgccaatgacaatgctccagttttt
cagaggcctgtatatgatgtttcactgtatgaaaacaatagtcctttcactcatcttctc
actgtaaatgctcaggatgctgacgtagggaaaaatgcagaggttacctacaagattatt
gactctataatttcagggataccactatcaacttttgtcactgtccactccaaaacaggt
gaaattgttgtgcttaaggcaattgattatgaggaaattaaggaaatgcaattcttggtg
caagcagaagacaatggtgacccacaactcagcagtaacgcttctgtcaaggtattgata
agagaccaaaatgataatagcccattaattgtgcaacctcaacttaagaaaggccatgcc
actatcaccatccttgtgaatgctgaaagtgggtactttctttctgcctcagaagttacc
agctcagaggccttgggatacacatcagatgagattctatcagaaacagccaaacttaac
aaacacccaatatttcaagttattgccactgatgcagactcagatgggaatgctagactt
gtctaccatttgttggatgactacctaggcttgtttgctatggatgaacatcttggatac
atatacataaactccagcaatgccagcaacctaataggtaatgccatagacttacaggta
actgtcagagactgtggaattccttatcaggaaaccaaagctaaactaacaattatgttt
ggtagccacttggaccacttgaaaaattcagctagcgaaaccaacggcaagctgagcctg
tctgtggtaattgttatttgcctggctgttcttctagttgtatgtctccttatattggct
ctcatcatgtcctattgccgagtagacagaaaggacaatagagcatacaactgcagagag
gaagaatctgcctataggaagcagcctagaaggcctcaaaagcagatacaaaaggcagat
attcatgtagtccctgtacttagaggtcggcaacaaccacaaccagtgacaccagtggaa
gaggcaaagttgtttcctttgccagaggaaggacaagaagttccagaggatcaaactctc
catactccttttcatctcacacccacactatatcgcacactaaggcaccaacataaccag
gaaatattaagtgaagatactacagatttagagcagtctttctcattacctccctctgtg
tgccgaacattacagtatcagagacagagaagctactctagagagaactttgaagacccc
agtggaacccttccagtcagtaatacaaccttaaagaacccaggtagccctcaaataaga
gtccatgataatttcagcccttctgaacccatagtatacaatggagagaactttcctcca
gctacttctcctacgctaagaagacaaaagaatgtagaacagtcatctaaagagcagatc
ttgagaagcctggtgcgactatcgatggtggcattagcagagaaagaaggtgtggatgtt
accatgcagtcaccacatgtgcagcaaatttctcagcttttatctctgctccaccaagga
caagttcaccccaagacacttcacagaggaaacaaatactcatctaaggctggcagaact
gctgggcaggagaccgattggcaaagcacaaaggacagcggccatggtgagagtgaagct
ggagatctggactctgagtcagggggtgacttctctactagccataacttcctggaagac
aattttgaggctcttctgggccctaatggaagttcagaaggcaactgcatgagtgatctt
gaccctggatggattgctcggctctctttacctttggccaacagctacaaggagaatcta
ttcactcccaataatcaaatagctctggagcctccaatcacagcaacagagaaagaagat
ctaagaaccttcttaacatttggcaagcttacagatgggtcgcaagacaacagattggcc
agcacctttctctccgaaatgagcaccctctttgaaatgttgttgacacagaaagccgag
gcccatggggatacagattcagaggtgctaatgagactttccggtagcagcaagagtttg
ggaatggatagtagaagagatggcactaggaacttaatgaaagattatgaaaaccatcat
tga
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