Rana temporaria (common frog): 120932815
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Entry
120932815 CDS
T07929
Symbol
CAPRIN2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120932815 (CAPRIN2)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
120932815 (CAPRIN2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
C1q
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
120932815
NCBI-ProteinID:
XP_040201487
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Position
3:374413179..374473925
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AA seq
1063 aa
AA seq
DB search
MVQLSQSSPTGDSQVMRDIKSQSEHGLSSLQSSLSPTATTLQVYETYLENGYVSLKHKIR
NIEKKKVKLEDYRDRLRNGEELNQDQLEAVQKYEEVLHNLEFAKELQKTFSALNQDLIKA
QKKSLRREQVQRLEAEKRRLHKVLQVQYLLQSFAQDHIQGDFKNGLNGAMHLSSKEQDYL
AKFAKLICHKRFKHMSLEDEMDQSAGYFWNLLEGNEKTVAGTNYKHLKDLVARMLDCGYF
EDVPNPPPEKKPEVLPEKPPKTEIHKTTKLVELVRAQESIVECVKPDRDRQELSIRHIVL
RPNQMKTTEVQKIQDVKCIKPEPIKAWPAATMVKLPEPKRWQTPPSLTPLTKPWQGPVST
PQPEALPLKICEPEPPKERRERAQKQMSDLKPAIQVKEATLPAVVNGHIPVKKRDVPAPI
CVGHQSPTVGNSQVPRVLSQPAAEFCSSPTLPKDPELRKQKINDLIDEIKGTYNFMQDSM
LDSEFPPKCSPQQLPKVSPQQLPKVSPQQLPKVSPQQLPKVSPQQLPKVSPQQLPKVSPQ
QLPKVSPQQLPKVSPQQLPPASPLKVLIEAAPIQKDPIKPQELSPVPASEEMERDTACPV
TPERPALPSDHPSTVRSPVNLPASPVHELEAIPAEHMYVTSPRLMDPPLERNLTPVNLPS
SRIQSPKTPTNISILQLQQEETALSRSPPMSPHTSPFQSMPAVSSRVFKVNAPLRKEMEV
KEDPPYPVEYQQTFSTASTQTLPHGLLDMNGTDPRSLMQEHLPGPYSSGASPVNSGNLPC
YTSTPNILPRLSQPCMTRGGTIRGTSRGGRILTNGYRCQTTFKGPETFRGAQCVPNGMYG
HGPCPGRDFPVTQVISREANAHLCHKRSVTPSTRSTARNWNDSQLGSPEHEESFNSTDSG
QGDSRSMTSVDMSMNNQATILPVHVYPLPQQMRVAFSAARTSNFAPGTLDQSITFDLLLN
NLGDTFDFQMGRFMCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVMVSAYANDGAPDHE
TASNHAVLQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctctcacaatccagtcccactggtgacagccaggtgatgcgagatatcaag
agtcagtctgagcatggcctcagctccctgcagtcctcactgtcgcctactgcaacaact
ctgcaggtttatgagacttatctagagaacggctatgtcagcctgaagcacaaaatccgc
aacattgagaaaaagaaggttaaattggaagattacagagatcgtttaagaaatggggag
gagctgaatcaggatcagctggaagcagtgcagaaatatgaagaggtgcttcacaacttg
gaatttgctaaggagctccaaaagaccttttctgctctcaaccaagatctgattaaagcc
cagaagaaatcgctgaggcgagagcaagttcaaaggcttgaagcagaaaagaggcggctg
cataaagtcctgcaggtccagtacttgctacagtctttcgctcaggatcacatccagggg
gactttaagaatggactcaatggagccatgcacctctcctccaaagaacaggattatctt
gccaagtttgcaaagctgatctgccacaagaggttcaaacacatgagtctagaagatgag
atggatcagtcagctggctacttctggaacctgctagagggcaatgagaaaacagtggct
ggaaccaactataaacatttgaaagacctcgttgccagaatgttggattgtggctacttt
gaagatgtccctaatcctcctccagagaagaagccagaggttttacctgagaagccaccg
aaaactgagattcacaaaacaacaaagttagttgagctagtgagagcgcaagagtcaatt
gtggagtgtgtgaaacctgaccgtgaccgtcaagagctttctattaggcatattgtgctg
agacctaatcaaatgaagaccacagaagtgcagaaaatacaggatgtcaaatgcataaag
ccagaacccataaaagcttggccagcagctacaatggtaaaactgccagagccaaagagg
tggcagacccctccttcgctgactccactcaccaaaccctggcaggggcctgtgagcacc
cctcaacctgaagctctgcctttgaagatatgtgaaccagaaccaccaaaggagaggcgt
gaaagggcacaaaaacagatgtctgacctcaaacctgccattcaggttaaggaagcgacg
ctccctgctgtagtaaatggacatattccagtgaaaaagagggatgtcccagcacccatt
tgtgttggccatcaatctccaactgtaggcaattcacaggtcccccgggtactctcccag
ccagctgcagaattctgctcctcaccaactctgcctaaagatccagagctcagaaaacaa
aagattaatgaccttattgatgaaataaaaggcacttataatttcatgcaggactccatg
ttggattctgagtttccgccaaagtgttctcctcaacagctgccaaaggtttctcctcaa
cagctgccaaaggtttctcctcaacagctgccaaaggtttctcctcaacagctgccaaag
gtttctcctcaacagctgccaaaggtttctcctcaacagctgccaaaggtttctcctcaa
cagctgccaaaggtttctcctcaacagctgccaaaggtttctcctcaacagctgccacca
gcgtctcctcttaaagtcctaattgaggctgcaccaattcaaaaggaccccattaaacct
caggagctctccccagtgccagcttcagaagagatggagcgtgacacagcctgtcctgtt
acacctgaacgtcctgccctaccttctgaccatccatcaaccgtcaggtctcctgtaaat
cttccagcttctccagttcatgagttggaagcaatccctgcagagcacatgtatgtgacc
agtcctcgtctgatggatccaccactggaaaggaatctgactccagtgaatctgccaagc
agccggatccaatctccaaagactccaaccaacatatcaatcttgcagctgcaacaggag
gaaactgccttatccaggagcccaccaatgtctcctcacacctccccatttcagagcatg
ccagctgtaagttcaagggtgtttaaagtcaatgctcctctgcgaaaagagatggaagtt
aaggaggacccaccttatcctgtagaataccaacaaactttcagcacagccagtacccag
acccttcctcatgggctgttggacatgaatgggacggatccacgctcactcatgcaggag
cacttacctggtccttattcatctggggcgtctcctgtaaacagtggaaatctgccttgt
tacacatctacccccaacatcctacccagactttcccagccatgcatgaccagaggtgga
acaatcagggggaccagccgtggagggcgtatcctgaccaatggctatcgctgccagacc
accttcaaaggtccagaaacctttagaggagcccaatgtgtccctaatggaatgtatgga
catggcccatgccccgggagagactttccagttactcaggtcatatctcgggaggcaaat
gcccatctgtgtcacaagcgaagtgtcactcctagtacacgctctactgcaagaaactgg
aacgactctcagcttggcagtccagagcacgaggaaagtttcaacagtacggactctggt
caaggagattctcgcagtatgacatcggttgacatgtccatgaacaaccaagccaccatc
cttcctgttcatgtttaccccctcccccaacaaatgagggttgccttctctgctgccaga
acctcaaactttgctccaggtactttggatcagtcgattacctttgacctcttgctcaac
aacctaggagacacctttgattttcagatgggccgttttatgtgtcctgttaatggcaca
tatgtcttcatctttcatatgctaaagcttgctgtcaatgttccactgtatgttaacctg
atgaagaacgaagaggtaatggtttcagcctatgccaatgatggtgctcctgaccacgaa
acggccagcaaccatgcggtcctacaactcttccaaggtgaccagatatggttacgttta
cacagaggagcaatttatggtagtagctggaagtactccactttttctgggtatttactg
taccaggattga
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