Rana temporaria (common frog): 120932928
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Entry
120932928 CDS
T07929
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04110
Cell cycle
rtem04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120932928 (SMC1B)
04114 Oocyte meiosis
120932928 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120932928 (SMC1B)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120932928 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
120932928 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
DUF3800
AAA_13
ABC_tran
Motif
Other DBs
NCBI-GeneID:
120932928
NCBI-ProteinID:
XP_040201727
LinkDB
All DBs
Position
3:390429097..390601316
Genome browser
AA seq
1227 aa
AA seq
DB search
MGYLSHLVLQNFKSWRGRQVIGPFKRFNCVIGPNGSGKSNLMDALSFVMGERTSNLRVKS
VRELISGANVGRPVSSTASVHLVYCDETGEEKTFSRMILGGATEYRLNDTPIGRSAYVLE
LEKIGIISKARNCLIFQGEVESIAVKKPKERTQLFEQISNSSELAEEYEQKKKKMLQAEE
DAQFCYNKRKNVAFERKHAKIEKEEADRYKSLRHELLKSKQHLQLFQLFYNENKLENLYG
NLNEKHMETNSQKDQLADTESELKTVKQGFGRLNRELQQIEKEIKVLEASLNQLRPQFIK
TKENSKHQMKKVEITKSSLKKTEKHCGTLEQDINELEKEIDEVKQAWRIFDQKLEEEHLE
RQADVELEQSQLDQYRLLKEESRKKNAVLGQQLEKLHWEERAIEEKMAFQQRRQNEIEAN
KKCVEEQIEDYNRRVGKLEDYINTCINALEEHRKQEEQLVREIEYSTQRMSEVNEELNIT
VSELQNARIDFNEGTRQKKKAEILESVKRMYPDSVFGRLFELCHPIHKKYQLAVTKVFGK
YMNAIVVTSERVAKDCIRFLKEERAEPETFLALDYLELKTVNEKLREIRGCKMLLDVVQC
SNASLKKVVQFVCGNGLVCETVKEARHIAFDGPERLKTVALDGTMFLKSGVISGGSSDLR
FKAKRWDEKEITELKEKRDVLMSELKELIKLKRKESDLKQLQAQSQGTQTRLKYSQSELE
VIKKKNLASCFAEKSRLESEFSNAASQFTMLAEELGRHKGKIADLQEQMNKLEDSVFRNF
CDEIGVQNIRDFEEEHVKQHEETDKKRLEFGNQKTRLEIQIEYIRGQLKKETEKVIKLRE
NLSKEEEQVTQLKKDEQRFLRLVDEALSRQQEFKNHLIHKQSEVSQAQKLVEETRKKLIN
ISREIGKKQKEAMTIESLIEQKRLERHNLLLDCKVQDLNITLLAGSLEDIMEVEVDSEST
RTTAEIYEREGTIRIDYDDLPHNLKVLMTDNEISAELMRMRQQCIAHENILLKTSAPNLR
ALEKLQNISDKFQETTNAFETSRKKASLCRTEFEQVKQKRYELFSQCFEHVSVAIDQIYK
KLCRNASAQAFLSLENSEEPYLDGIGYNCVAPGKRFMPMDNLSGGEKSVAALALVFAIHS
FRPAPFFILDEVDAALDNSNIGKVTSYIKEQTRQHFQMVVISLKEEFFSKADALIGVCTE
HDEMCSQVLTLDLTVYEDDEDSESDRM
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgggctacctcagtcacctcgtcttgcagaacttcaaatcgtggagaggccgccaggtc
atagggcccttcaaacggttcaattgtgtcattggccccaatggttcaggaaaatcaaat
ttaatggatgcacttagttttgtgatgggtgagagaacgtctaatttaagagtgaagagt
gttcgagagcttattagcggagctaatgtagggcggcctgtctcttctactgccagcgtg
cacttggtttattgtgatgagactggagaggaaaagacattttcgaggatgattttaggg
ggcgctacagaatatcgacttaatgacacaccaataggacgttcagcgtatgttctggag
cttgaaaaaattggaataatttcaaaggccagaaattgtctcatatttcagggtgaggtg
gaatccattgcagtgaagaaacctaaagaaagaacccaactttttgaacaaataagcaac
tcatcagaactagcagaagagtatgagcaaaagaaaaaaaaaatgttacaggctgaggaa
gatgcacagttctgctataataagaggaaaaatgtggcatttgaaagaaagcatgccaag
atagagaaggaagaggctgatcgttataaaagtcttcgccatgaacttcttaaaagtaaa
cagcatctccagctttttcagcttttttacaatgaaaacaaattggagaatttatatgga
aacttaaatgaaaaacacatggaaaccaacagtcaaaaagaccaacttgctgatactgaa
tctgaactgaagactgtaaaacaaggttttggaaggctgaacagagaactacagcagatt
gaaaaagaaattaaagtccttgaagcatcactaaatcaattgaggccccagttcattaaa
acaaaagaaaattctaaacaccagatgaagaaggttgaaattactaaatcttccctgaag
aaaactgagaaacactgtggcacactggagcaagacattaatgagttggaaaaggagatt
gatgaagtaaagcaggcctggagaatattcgatcagaagcttgaagaggagcatttagaa
agacaagcagatgttgagttggagcaaagtcagctggatcaatacaggctgttaaaagag
gagtcgcgaaagaaaaatgctgtactggggcagcagctggaaaagcttcactgggaagag
agggctatagaagagaaaatggcgtttcagcagaggagacaaaacgaaatagaggcaaac
aaaaagtgtgtagaggagcagattgaagactacaacaggagagtggggaaattagaagac
tacatcaacacttgcatcaatgctcttgaagagcacagaaagcaggaggaacagctcgtt
cgtgaaattgaatacagtactcagaggatgtcagaggtaaatgaggagctgaacattact
gttagtgagctgcagaacgctaggatcgattttaatgaaggcactcgccagaagaagaaa
gcagaaattttggagagtgtgaaaagaatgtacccagactctgtgtttggcagattgttc
gagctgtgtcatccaatccataaaaagtaccaactagctgttaccaaggtctttggcaag
tacatgaatgccattgttgtgacaagtgagagggtggcaaaggactgcatccgatttctc
aaagaagaaagagcagagccagagacatttcttgccttggactatctggaattaaagaca
gtcaatgaaaagctgagggaaattagaggttgcaaaatgttgcttgatgtcgtacagtgt
tcaaatgcctctctaaaaaaggtggttcagtttgtttgtggcaatggcctggtgtgtgaa
acagtcaaggaggcaagacacattgcatttgatggtcctgagaggctaaaaacagttgct
ttggatggaactatgttcttaaaatctggtgtgatatctggaggctcaagtgatttgagg
tttaaagccaaacgctgggatgaaaaagagataactgaactaaaagagaaaagagatgtt
ttaatgagtgaactaaaggaactaataaagttaaagaggaaggagagcgatttaaagcag
cttcaggctcaatcacaaggaacacagacccgtctcaaatattctcaaagtgagctagaa
gtcataaagaagaaaaatcttgccagttgctttgcggaaaaatctaggctggaaagtgag
ttttcaaatgctgcttctcagtttacaatgttagcagaagaacttggaaggcataagggt
aaaatcgcagaccttcaagagcaaatgaataagctggaagacagcgtgtttaggaatttc
tgtgacgagataggagtgcaaaatattcgtgattttgaggaagaacatgtgaaacaacat
gaagaaaccgacaagaaaaggctggagtttggaaatcagaagacacgtctggaaattcaa
attgaatacattcgtggacaactaaagaaagaaacagaaaaagtgataaagcttagggag
aacttaagcaaagaggaagagcaagttactcagttaaagaaggatgaacaacgatttctc
aggttagttgatgaagccttatctcggcaacaagaatttaaaaatcatctgattcacaaa
cagtcagaggtctctcaagctcagaaactggttgaagaaacacgtaagaagctgataaat
attagcagggaaattggcaagaaacagaaggaagcaatgaccattgaaagtctgatagag
cagaaaaggttagaaagacacaatttactcctggattgtaaagtccaagatttgaatata
actctgctagctggctccttggaagatatcatggaagttgaggtagacagtgaaagcacc
cgaactactgctgaaatctatgaaagagaagggactattcgcattgactatgatgatctt
cctcataatttaaaggtgttgatgaccgacaatgaaatctcagctgaacttatgcgaatg
cgtcaacaatgcattgctcatgaaaacatcctgctaaagacatctgctccaaacctgaga
gctctggagaaactccagaatatcagtgacaagtttcaagaaaccacaaatgcttttgag
accagcagaaagaaagccagtctgtgtaggacagaatttgagcaggtgaagcagaagaga
tatgagctttttagccagtgttttgagcatgtttctgtagctatcgatcagatctacaag
aagctctgcagaaatgccagcgctcaggcctttcttagtcttgagaattcagaggaacct
taccttgatggaattggctacaactgtgtagctccggggaagagatttatgcctatggac
aacttgtctggaggagagaagtctgtagctgcactggctcttgtgtttgctatccacagc
tttcgtcctgcaccattcttcattttagacgaagtagatgcagctttggacaacagtaac
attggtaaagtcacaagttacatcaaagaacagacaagacagcacttccaaatggtggta
atttccttaaaagaagagtttttttccaaggcagatgctttaattggagtgtgcacagag
catgatgaaatgtgcagccaagtgctgactctggatctcactgtctatgaagatgatgaa
gactctgaaagtgacagaatgtaa
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