Rana temporaria (common frog): 120932932
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Entry
120932932 CDS
T07929
Symbol
NUP50
Name
(RefSeq) nuclear pore complex protein Nup50 isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120932932 (NUP50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120932932 (NUP50)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120932932 (NUP50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
120932932
NCBI-ProteinID:
XP_040201734
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All DBs
Position
3:complement(390806989..390845184)
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AA seq
462 aa
AA seq
DB search
MKVEKMGKMAKRVADKELTDRNWDQEEEAEDAGTFSVAPRDVLKNRAIKKAKRRNPGSDP
EKGGAFKGFQGLVPSGASLTGFGSVAKPIQGLTNGNGGASLFGNSKPTIESKPVFGSLFA
NGPPTSLSSTIDVSSTAKTNGEMPSSTSSPSPTPSKPGSSTEYNKQLMSLNCAVRDWIMK
HVKATPLCDLTPIFRDYEKHLASIEQKYGTVTDSGSESDSTSKLTPSISTLVSSNTEAKP
TFSFTSKEEKSEQPAKSKTETKTESAPLFSFGQKSDTANFSSFGSGSAATFSFKVGSDSL
LSKDTSKSSVGTPFSFQSGTSAKNEESGGKEEEDAEEPPKVVVQEIKEDDAFYSKKCKLF
YKKDNEFKEKGVGTLHLKPVMDQKTQLLVRADTNLGHILLNILVQPSMPCSRTGKNNVMI
VCVPNPPVDEKNPTVPATMLIRVKTTADADELHKLLLEKKGP
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtagaaaaaatgggcaaaatggcaaaaagagtagccgacaaggagctgactgac
cgcaattgggatcaagaggaggaggcggaggatgcaggaacgttctctgtagcacctcga
gatgttctgaagaacagggcaattaagaaagcaaagagaaggaaccctggaagtgatcct
gaaaaaggaggagcgttcaaaggctttcaaggcttggtaccatctggagcttcattaact
ggatttggaagtgtcgctaaaccaattcaaggtctgaccaatgggaatggtggcgcatcc
ctgttcggcaattcaaagcccacaattgaaagcaaacctgtttttgggtctctctttgca
aatggaccaccaacatccttgtcctcgactatagacgtatcctccaccgcaaaaacaaac
ggtgaaatgccttcatctacctctagtcctagtcctacccctagcaagcctggcagctcc
actgaatacaacaaacagttaatgtccctgaattgcgctgtacgggactggataatgaaa
catgtgaaggccacacctctgtgtgatttgaccccaatttttagagactacgagaaacat
ttggctagtattgaacagaagtacggaactgtcacagacagtggatccgagagcgacagc
acttccaaattaaccccctcaatttccacccttgtttcttcaaatacagaggctaagcca
accttctcttttaccagcaaagaagaaaagtctgagcaaccagcaaagtctaaaaccgag
acgaaaactgaatcggctccccttttttccttcggccaaaagtctgacactgcgaatttc
agttcattcggctctgggtcggcagctacattttcttttaaagtaggatctgacagtctg
ttaagtaaggatacaagtaagagcagtgtggggacaccattttccttccagtcagggaca
agcgccaagaatgaggaatctggtggcaaagaggaagaagatgcagaagagccaccaaaa
gtagttgtacaagaaataaaagaagatgatgccttttattccaagaagtgtaaactcttc
tataagaaagacaatgaatttaaagagaagggggttggaacgcttcacctaaaaccagta
atggatcagaaaacccagctgctggttcgtgctgatacaaaccttggccacatcctactg
aacattttggtgcagccttccatgccatgctctagaacaggaaaaaacaatgtgatgatt
gtttgtgttcctaaccctcctgtcgatgagaagaaccccaccgtccccgccaccatgctg
atcagagtgaaaaccacagcagatgctgatgagctgcacaaacttctcctggagaagaag
ggaccctaa
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