Rana temporaria (common frog): 120933163
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Entry
120933163 CDS
T07929
Symbol
PLAT
Name
(RefSeq) tissue-type plasminogen activator
KO
K01343
tissue plasminogen activator [EC:
3.4.21.68
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
120933163 (PLAT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtem01002
]
120933163 (PLAT)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rtem00536
]
120933163 (PLAT)
Enzymes [BR:
rtem01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.68 t-plasminogen activator
120933163 (PLAT)
Peptidases and inhibitors [BR:
rtem01002
]
Serine peptidases
Family S1: chymotrypsin family
120933163 (PLAT)
Glycosaminoglycan binding proteins [BR:
rtem00536
]
Heparan sulfate / Heparin
Coagulation and fibrinolysis
120933163 (PLAT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
Kringle
DUF1986
Trypsin_2
EGF
EGF_C8A_B_C6
Motif
Other DBs
NCBI-GeneID:
120933163
NCBI-ProteinID:
XP_040202140
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All DBs
Position
3:complement(423590216..423638965)
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AA seq
560 aa
AA seq
DB search
MSLKISTMNMFVTLILFEVISSTEEVLHHREKRGTRTFKSVCIERSSGRVFRGDDTWLRS
AGRRVEFCRCENGKSKCHSVPVMDCTETKCYNGGRCRQALYSSNHLCLCLSGFSGENCEI
DTRTTCYQGSGESYRGNHSRTVSGAVCVNWNSPGLNGKRYTTQNREALQFGLGNHNFCRN
PDGEVSPWCYVFKDGAYNWEHCRVPSCPVDIPDCYSERGTSYRGSGSVTISGARCLRWDS
ALVKNKVFNAWSGKSRSQGLGSHNYCRNPDNDVRPWCHVMNGTQAGWEFCDVPKCSTCGI
RNPPPPLQPRFRIAGGRGAQITSHPWMAALFHVYRRSEFFFCGGTLIDHCWVLTAAHCLS
SNKLSANKIRVKLGRTMRAVPGVQEQSFRVEKIYKHPQFDEDTFDNDIALLKLQSTSGSC
AMETDNARPACMPERGQKLQDWTECEISGYGRQEEFSPFYSDQLKEGHVRLYPENMCTPK
QLDDRTVTSNMLCAGDTRNQDDACQGDSGGPLVCLTNGRMHLFGIVSWGEGCGRKGKPGV
YTKVTQYLDWIEHRTGLRMY
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaaagatcagcaccatgaacatgtttgtgaccctcatcctctttgaggttata
tcttcaacagaagaggttcttcaccaccgagagaagagaggaacaagaacattcaaatcc
gtgtgcattgaaaggtcctcaggaagagtcttcaggggtgatgacacctggctacgatct
gcaggacggagggtagagttctgtcgctgtgagaatgggaagagcaaatgtcatagtgtg
ccagtcatggactgtacagaaacgaagtgctacaatggaggtcgctgccgccaggccctg
tactcctcaaaccatctctgcctgtgtctgagcggattctctggagaaaactgtgaaata
gacacacgtactacatgttaccagggctccggagagtcttacagaggaaatcacagccgc
acagtgagcggagcagtttgtgtaaactggaactctccagggctcaatggaaaaagatac
accacacagaacagagaggctttacaattcggactgggaaatcacaacttctgcaggaac
cctgatggcgaggtctctccctggtgttatgtatttaaagatggtgcgtacaactgggaa
cattgcagagtgccatcctgcccagtagacatcccagactgttattcagagcgaggaact
tcatatcgaggctctggcagtgtcaccatctctggtgcccgctgtttgcggtgggactca
gccctggtgaagaacaaagtcttcaatgcctggagtggcaaatcccgcagccagggtttg
ggaagccataactactgcaggaatccagataatgatgtgcgtccttggtgtcatgtgatg
aatggaactcaggctggctgggaattctgtgatgtccctaaatgctccacttgtggaatt
cgaaatcctccaccaccgttacagccccgattccgtattgctggaggccgaggtgcacag
attacatctcatccatggatggcggctctcttccatgtttataggcgatcagagttcttc
ttctgtggtgggaccctgatagaccactgctgggtcctgacagctgctcattgtctttca
agtaacaagctgtccgccaacaagatccgtgtcaagctgggccgaacaatgcgcgctgtg
cctggagttcaggaacaaagtttcagagtggaaaaaatttataaacacccacaatttgat
gaagatacctttgataatgacattgctcttctgaagctgcagtctacatctggatcatgt
gctatggagacagacaatgccaggccggcctgcatgcctgagaggggacagaagctgcaa
gactggacggagtgcgagatctctggatatgggaggcaagaagaattttctccattctac
tctgatcagctgaaagaaggacatgtcagattataccctgaaaacatgtgcactcccaag
cagcttgacgaccgaacagtgacttccaacatgctgtgtgctggtgacacaaggaaccag
gatgatgcctgccagggtgattctggaggacccctggtctgtctcacaaatggccgcatg
catctgtttggcattgttagctggggtgaaggatgcgggcgaaagggaaagcctggcgtt
tacaccaaagtgactcagtacctagactggatagaacaccgtacgggccttcgaatgtac
tga
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