Rana temporaria (common frog): 120933197 Help Entry 120933197         CDS       T07929                                  Symbol XAB2 Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism rtem  Rana temporaria (common frog) Pathway rtem03040   Spliceosome Brite KEGG Orthology (KO) [BR:rtem00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     120933197 (XAB2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:rtem03019]     120933197 (XAB2)    03041 Spliceosome [BR:rtem03041]     120933197 (XAB2) Messenger RNA biogenesis [BR:rtem03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      120933197 (XAB2) Spliceosome [BR:rtem03041]  Complex B   Other components    Prp19-related factors     120933197 (XAB2)  Complex C     120933197 (XAB2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_12 TPR_2 TPR_8 TPR_19 TPR_15 ARM_TT21 ARM_TT21_C TPR_NPHP3 TPR_16 ANAPC3 TPR_1 NRDE-2 CCDC84 Tcf25 Motif Other DBs NCBI-GeneID:  120933197 NCBI-ProteinID:  XP_040202196 LinkDB All DBs Position 3:426840067..426877160 Genome browser AA seq 883 aa AA seqDB search MATKSSQPGKTITFLTSDLRRRHGSLLGPVPGSDADFMRPENHIMPDKQILIEEDDLQYE EEILRNPYSVKCWMRYIEFKQTASAHALNLIYERALKELPGSYKLWYAYLKQRRKQVKRR CLTDPAFEEVNNCHERALVFMHKMPRIWLDYCQFLMDQCKITRSRRTFDRALRALPITQH HRIWPLYLRFVRAHPLPETAVRVYRRYLKLSPENAEEYIEYLRSVDRLDEAASRLAAIVN QEDFISKEGKSNYQLWQELCTLLSQNPGSIRSLDSGAIIRGGLTRFTDQRGKLWCALAEY HTRSGHFEKARDVYEEAIQTVTTVRDFTQVFDSYAQFEESVIAAKMETVSEMGKEEEDDI DLELRLARFEQLMERRPILLNGVLLRQNPHNIHEWHKRVQLYKDKPREIISTYTEAVQTV DPAKATGKPHSLWVAFAKFYEDNGQIDDARDILQRATQVRYTHVDDLASVWCQFGEMELR HENYDEALTILRKATAVPARKAEYFDASEPVQNRLYKSLKVWSMLADLEESLGTFKSTKA VYDRIIDLRIATPQIIINYAMFLEEHNYFEESFKAYERGIALFRWPNVYDIWSTYLSKFI ARYGGKKLERARDLFEQALDGCPKKFAKNIFLLYAKLEEEHGMARHAMALYERATLAVEP REQYEMFNIYIKRAAEIYGVTHTRSIYERAIELLPDEQSREMCQRFADMEAKLGEIDRAR AVYSFCSQMCDPRLTAGFWQNWRDFEVRHGNEDTIREMLRVKRSVQAKYNTQGTFLVSQR LRAEAAGAGQESKEPVDEMQALEQKAAVVAAEAERDKPQMKEKILFVRSDASKTELAEMT RQVNPDEINIGEEDESEEELEPDEVQLEQKSVPASVFSGLADD NT seq 2652 nt NT seq  +upstreamnt  +downstreamnt atggccaccaagtcctcgcaacccggaaaaactatcacgttccttacgtcagacttacgt aggcgccacggatcgcttctggggccggtccccggaagtgacgctgatttcatgagacct gagaatcacatcatgcctgataaacagatcctgatcgaggaggatgaccttcagtatgaa gaggagatcctgcgtaacccgtattcagtcaagtgctggatgcgatatattgaattcaag cagaccgcctcagcacatgcacttaacctgatatacgagagagcactaaaggagctgcca ggaagttacaagttatggtatgcctacctaaaacagcgcaggaagcaggtgaagagacga tgcctaactgatccggcctttgaagaagtaaataattgccacgagcgagcccttgtcttc atgcacaagatgcccagaatttggctggactactgccagttccttatggatcagtgtaaa attacccgctcaagaaggacatttgatcgtgctcttcgtgcactccccattacacagcac catcgtatctggccactgtacctaagatttgtccgtgctcaccctcttccagagacagca gtccgggtctacaggcgatacctaaagctgtcacctgagaatgcagaagagtatattgag tatctgcgctctgtggacaggttggatgaggctgcatctaggctggcagccattgtgaac caagaggattttatatccaaagagggaaaatcaaactaccagctttggcaggagttgtgt accctcctttcacagaacccaggatctatacgctctctggactctggagccattattcgc ggtggcctcactcgcttcaccgatcagagggggaaattgtggtgtgcccttgctgagtac catacacggagtggtcattttgaaaaggctcgagatgtttatgaagaggccattcagaca gtcaccactgtccgtgacttcactcaggtgttcgacagctacgctcagtttgaagagagc gtcattgcagccaaaatggaaaccgtcagtgagatgggaaaagaagaggaagatgacata gacctagagctgcgattagcccgtttcgagcagctgatggagaggaggcctatcctactg aatggggtgttactgagacaaaacccacacaatatccatgagtggcacaagagggtgcag ctgtacaaagacaagccacgggagatcataagcacttacacagaagctgttcagactgta gatccagcaaaggccactgggaagccacactcactttgggttgcttttgcaaaattttat gaagacaacggacagattgatgatgccagagacatccttcaaagagcgacccaggtacga tacacacatgtagatgacttggcctctgtctggtgccagtttggtgagatggagctgaga catgagaactatgatgaggctctgacaatactaagaaaagccactgcggtgccagcccgt aaggctgaatactttgacgcctctgagcctgttcagaacagattgtacaagtcattgaag gtgtggtctatgttggctgatctggaggaaagtttaggcacttttaagtccaccaaggct gtatacgataggatcattgatctccgcatagccaccccacagattataatcaactatgct atgttcttggaggagcacaactattttgaagaaagttttaaggcctacgagcgtggcatc gcccttttccgctggccgaatgtctacgacatctggagtacttatctgtccaaattcatc gctcgctatggaggaaagaagctggaaagagctcgtgatctgtttgaacaggctctggat ggctgtcctaaaaaatttgccaaaaatatctttctcttgtatgccaagctggaggaggag catggtatggcccgacatgccatggctttatatgagcgtgccactctggctgtagagcca agagaacagtacgagatgttcaacatttacatcaagagagccgctgaaatatatggagtc acacacacccgaagcatttatgagcgagccatagagctgttgccagacgagcagtctaga gagatgtgccagcgtttcgcggatatggaggccaagcttggagagattgatcgagcccga gccgtgtattccttctgttcccagatgtgcgatcctaggctgacggcagggttctggcag aattggcgagactttgaggtgcgccatggcaatgaggacacaatccgggagatgctgcgc gtgaaacgaagtgtgcaagccaaatacaacacacagggcacgttccttgtatcccagaga ctgagggcagaagcagcaggggctggccaggaatctaaagaaccggtggatgagatgcag gctctggagcagaaggcagcggtggtggcagcagaagctgaaagagataaaccacagatg aaggagaagatcctgtttgttaggtctgatgcttctaagacagaattggcagagatgaca cggcaggtaaatccagatgagatcaacataggggaggaagacgagtcggaggaggagctg gagccggatgaagtacaattggagcagaaatcggtccctgcgtcggtcttctctgggctt gctgatgactga

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