Rana temporaria (common frog): 120933247
Help
Entry
120933247 CDS
T07929
Symbol
COLGALT1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem00310
Lysine degradation
rtem00514
Other types of O-glycan biosynthesis
rtem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120933247 (COLGALT1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120933247 (COLGALT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtem01003
]
120933247 (COLGALT1)
Enzymes [BR:
rtem01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
120933247 (COLGALT1)
Glycosyltransferases [BR:
rtem01003
]
O-Glycan biosynthesis
O-linked Gal type
120933247 (COLGALT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_tranf_2_4
Glyco_transf_25
Anp1
IF4E
Motif
Other DBs
NCBI-GeneID:
120933247
NCBI-ProteinID:
XP_040202283
LinkDB
All DBs
Position
3:complement(432196026..432287648)
Genome browser
AA seq
611 aa
AA seq
DB search
MYRRCCECVRRLWLLSAVLSGLSAAYFPEERYNPESQLRPPTVLLSLLARNAEGSLPEVL
GALDRLRYPKDRISLWVATDHNLDNTSSILREWLINVQSQYHHVEWRPQEHPRWFQDEEG
PKHWSHSRYEYVMKLRQAALNSAREMWADYIMFIDADNLLTNPDTLNLMIAENKTVVAPM
LESRAAYSNFWCGMTTQGYYRRTPAYMPIRRRERRGCFAVPMVHSTFLIDLRKEASRHLD
FYPPHPDYTWAYDDIIVFAFSSRQAEVQMFICNKEAYGHLPVPLRLHSTLIDEADNFLHT
KLEVAVKGPPVEPSAFLSLPPKVADKMTLDEVFLINLKRRPDRRERMKRVLHELQIDYKL
SDAVDGKSLNETQVTAMGVKMLPGYKDPYHGRPLTRGEMGCFLSHYNIWKEIVERSLAIS
AVLEDDLRFEIFFKRRLENLLQDVEKAQLDWDLIYMGRKRMQVEEPEESVPGVRNLVIAD
YSYWTLGYLISLQGAKKLMNAEPLTKMLPVDEFLPVMYDKHPVSDYSSFFSPRDLQAFSV
EPLLLYPTHYTGDEGYVSDTETSVLWDNVTETTDWDRAKSQKTQQQEKLRSEAINTPSLR
SPFDSAARDEL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtaccggaggtgctgtgagtgtgtgcggcggctgtggctgctctccgccgtactttcc
ggactcagtgccgcctacttcccggaggaacgctacaacccggagtcccagctacggccg
cccaccgtcctcctctccctgctggccaggaacgccgaggggtccctgccggaggtgctg
ggggcgctggaccgactccgctaccccaaggaccggatctcactatgggtggccacagat
cacaatctggacaatacaagcagcatactacgagaatggctcatcaatgtccagagccag
taccatcacgtggagtggaggccccaggagcaccccaggtggtttcaggacgaggaaggt
cccaagcactggtctcactctcgctacgaatatgtcatgaagcttcgccaggcggctcta
aactcagcgcgggaaatgtgggctgactacatcatgtttatagatgctgacaacttgctg
actaacccagacaccctcaatctgatgattgcggagaacaagacagtggtagcccccatg
ttggagtccagggcggcctactccaatttctggtgcggaatgaccacccagggatattat
agacgtaccccagcctacatgcctatacgacggagagaacgccgtggctgctttgctgtc
cccatggttcactccaccttccttattgacctgcggaaggaggccagccgacacctggac
ttctatccaccccatccagactacacctgggcctatgatgacatcatagtgtttgccttc
tccagccggcaagctgaagttcagatgttcatctgcaataaagaggcttacgggcacctc
ccagtccctctgcgattacacagcactctgattgatgaagccgacaactttctgcacacc
aagctggaggttgcggtgaagggtccccctgttgagccatcggctttcctgtccctcccc
ccaaaagtagcggataagatgacgttggacgaggtttttctcattaatctgaagcgtcgc
ccggataggagagagcgaatgaagagggtgctgcacgagctgcagattgactacaagcta
tcggatgctgtggatggcaagtcattgaatgaaactcaggtgaccgctatgggtgtaaag
atgctccctggatacaaggatccttatcatggccgccccctgacacgaggagagatgggc
tgtttcctcagtcactacaacatctggaaggagattgtggaacgttcactcgccatctcc
gccgtattggaagatgacctgagatttgaaatcttctttaagaggcgtctggagaacttg
ctgcaggacgtggagaaggcacagctggactgggacctcatctatatgggccggaaacga
atgcaggtagaggaacccgaagagtcagttccaggggtccgcaacttggtcattgctgat
tattcatactggacactggggtacctgatctctcttcagggagcaaaaaagctgatgaat
gccgaacctctgaccaagatgcttcctgtggatgaattcctgcccgtcatgtacgacaag
catccagtctctgattactcctctttcttctcaccgcgggacctgcaagccttctctgtg
gagcctctgctgctatacccaacccactacaccggggacgagggctacgtcagtgacaca
gagacttctgtactgtgggacaacgtgacggagaccactgactgggacagagccaagtcc
caaaagacccaacaacaggagaagctgcgcagtgaagccataaacaccccgtctctccgc
tccccatttgacagcgccgcccgcgacgagctatga
DBGET
integrated database retrieval system
