KEGG   Rana temporaria (common frog): 120933262
Entry
120933262         CDS       T07929                                 
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
  KO
K23625  ataxin 2/2L
Organism
rtem  Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rtem03019]
    120933262 (ATXN2)
Messenger RNA biogenesis [BR:rtem03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     120933262 (ATXN2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 LSM
Other DBs
NCBI-GeneID: 120933262
NCBI-ProteinID: XP_040202317
LinkDB
Position
1:complement(175085355..175211280)
AA seq 1104 aa
MSMKQSGNNRKPGGGSSVPAPGGGRQNIGRGRSSGKVPPQSISFDGIYANMRMVHILTSV
VGSKCEVHVKNGSVYEGVFKTYSPKCDLVLDAAHKKNKDSVGGPKREDIVDSILFKSSDF
VMVQFKDMDVNYARRDGFTDSGIASKVNGEHKEKDLEPWDGGDVLLSSNASTNNDELESL
DTDVSNGWDPNEMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARAAQIAEEI
ESSSQYKARVALENDDRSEEEKYTAVQRNMCDRDGHSVTPRENKYVPPGQRSKDGMSWSS
HGVRQNSPRMGNSGSGPIPSRTGSHSSEYSPSSGTDQRVVNGGVSWPSPCPSPSSRPPSR
YQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPK
AQRHPRPHRVSNGRSTMCGGLEFVSRNEPGEVSSPPVARNNSSGSSWSSVVSGVQRLSPK
THRPRSPRQSAIGGGSTAPPLNSPQAGSTTPESVTVPVPTGSPTPASPATNRAVTPSCEA
KDSRLQDQRQNSPAGGREAIKQSDSSSFIKPENKVMPPMPSEQRKQLDDLKKFKNDFRLQ
SSSSPDAIDHILGKNRDGVEKPRELLKEKPDSSSKESPSESGSNAPTSNSSSKPSSPSIS
PSISSSSSEPKRGPEVTSQGVQTSGPGKPDREDKDDKKENAAEQVRKSTLNPNAKEFNPR
SYAQPKPSTTPTSPRPQAQPSPSMVAHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYSI
PMTTMPVNQAKTYRAGKVPNMPQQRQDQHHQNTMIHPVSAAGPPIVATSPAYSAQYVTYS
PQQFPSQPLMQHVQHYQSQHPHVYSPVIQGNSRMMAPPAHAHAQAGLVSSSGAQYGAPEQ
THAMYVSTNSLAQQYAHPSTALHPHPPHPQPSATPTGQQQSQHGGSHPSPSPVQHILPKG
FWLPQHHQHQAAQALHLANQQQQSAIYHTGLAPTPPSMTPGSNAQSPQSSFPTQQTVFTI
HPSHVQPAYTNQPHMAHVQQAHVQSGMVPSHPTAHPMMLMTAQPPGGPQAALQQSALQPI
PVSTTAHFPYMTHPPVQAHHQQQL
NT seq 3315 nt   +upstreamnt  +downstreamnt
atgtccatgaagcagagcggtaataacaggaagcccggcggagggagcagtgtgccggca
cccggaggaggcaggcagaacattggcagggggcgcagcagtggcaaagtacctccacag
tctatttcttttgatggaatctatgcaaatatgagaatggtccacattctaacttcagta
gttggatcaaaatgtgaggtacatgtaaaaaatggaagtgtatatgaaggggtttttaaa
acctatagtcctaagtgtgacttggtgctcgatgcagctcacaagaaaaataaagactct
gttggtgggccaaagcgtgaagatattgtggatagtatattattcaagtcttctgatttt
gtgatggtgcagtttaaggatatggatgtgaattatgcaagaagagatggcttcactgat
tctggtatagcttctaaagttaatggtgaacataaagagaaagatctggagccatgggat
gggggtgatgtcctccttagtagcaatgcatctactaataatgatgagctggaatcttta
gatacagatgtatctaatggttgggatcccaatgaaatgtttcgctataatgaagaaaat
tatggtgtagtatccacctatgacagcagtctttcctcatatacagttcctttagaaagg
gacaattctgaagagtttttaaagagggaagcacgagcagctcagatagcagaagagatt
gagtcaagctctcaatataaagcccgtgttgccttggaaaatgacgacagatctgaagag
gaaaaatacaccgctgttcaacgcaatatgtgcgaccgggatggacattctgtgactcct
agggaaaataaatatgtacctccagggcagagaagtaaggatggaatgtcatggagtagc
catggtgtacggcaaaattcaccaaggatgggtaattctggatctggacctataccatca
agaactggatcacattcttcagagtacagtcccagctctggaactgaccaaagagttgtt
aatggaggtgtttcctggccatcgccttgtccatctccttcctcccgcccaccttctcgc
taccagtcaggtcccaactctcttccacctcgggcagccacccctacaaggccgccctcc
aggcccccttcgcggccatcaaggccaccgtctcacccctctgctcatggttctccagct
cctgtctctactatgcctaaacgcatgtcttcagaaggacctccaaggatgtcacccaag
gcacagcgccatcctcgaccccacagagtttctaatggtaggagcacaatgtgtgggggc
cttgagtttgtttctcgtaatgagcctggagaagtgtcttctccacctgtagctcgaaat
aactcctctggcagctcgtggtcatctgttgtgagcggagtgcagagactgtctccaaag
actcaccggccccgatctccaagacaaagtgccatcggtggtggttctaccgcaccacct
ctaaactctcctcaggctggttctacaacgcctgaatctgtaactgtgcctgtacccact
ggatcaccaacacctgcaagcccagctacaaatagagcagttaccccatcttgtgaagcc
aaggactcaaggttacaagaccagaggcaaaattcaccagctggaggtagagaggccatc
aagcaaagtgactcctctagctttatcaaacccgagaacaaagtaatgcctccaatgcct
tcggaacaaaggaagcaactagatgatttaaagaagtttaaaaatgacttcaggctacag
tctagttcaagccctgatgctattgaccacatacttggaaaaaatcgtgatggtgtggag
aagcctagagaactcctgaaggaaaagccagattcaagttccaaggagtcgcctagtgaa
agtggcagcaatgcacctactagtaacagtagcagcaagccaagtagtccaagcatctcc
ccatccattagcagtagtagctctgaacccaagagaggccctgaggttacatcacagggt
gtacaaacctctggccctggcaaaccggatcgggaagacaaggatgacaaaaaggaaaat
gctgcagagcaagtacgaaaatccactctaaatcccaatgccaaggagttcaacccacgg
tcatatgcccagcctaaaccttctacaacacccacctcacctcggccacaagctcagcca
agtccttcaatggtggcccatcagcagccaaccccggtatacacgcagccggtatgcttt
gccccaaatatgatgtatccagttcctgtaagccccggtgtgcagccattatattcaatt
ccaatgacgacaatgccagttaaccaggccaagacatacagagcaggtaaagtaccaaat
atgccccagcagaggcaagatcagcatcaccagaacacgatgatacacccagtgtctgca
gcaggacctcctattgttgctacatcacctgcctactctgcacagtatgttacttatagc
ccgcagcagttccctagccagcctctcatgcagcatgtgcaacattatcaatcacagcat
ccacatgtatatagtcctgtaattcaaggaaattccagaatgatggctcctccagcacat
gcacatgcacaggccggcttagtgtcttcatcaggagcacagtatggagctccagagcaa
acacatgctatgtatgtttctactaactcgctagctcagcagtatgcccaccccagtact
gctctacatcctcaccctcctcatcctcagccttcagcaactcctactggacagcaacaa
tctcagcatgggggtagtcacccatcaccaagcccagttcagcacattctcccaaaagga
ttttggcttcctcagcatcatcagcaccaagctgcccaggctttacatctagctaaccag
cagcaacaatctgcaatttaccatactggacttgcccctacaccaccttcaatgacccca
ggctccaatgcacagtccccacaaagcagctttcccactcagcagactgtattcaccatc
catccctcccatgtccagcctgcctataccaatcaacctcacatggcacatgtgcagcag
gctcatgtacagtcaggaatggtcccgtcccatccaacagctcatcctatgatgctgatg
acggcacaaccaccagggggtccacaagctgctctgcaacagagtgctttacagcccatt
cctgtttctacaactgcacactttccctatatgacacatcctccagtgcaagcacatcac
caacaacagctgtga

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