Rana temporaria (common frog): 120933317
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Entry
120933317 CDS
T07929
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120933317 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtem03021
]
120933317 (SMARCA4)
03036 Chromosome and associated proteins [BR:
rtem03036
]
120933317 (SMARCA4)
Transcription machinery [BR:
rtem03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120933317 (SMARCA4)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
120933317 (SMARCA4)
Chromatin remodeling factors
BAF complex
120933317 (SMARCA4)
PBAF complex
120933317 (SMARCA4)
GBAF(ncBAF) complex
120933317 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
TFIIA
Motif
Other DBs
NCBI-GeneID:
120933317
NCBI-ProteinID:
XP_040202395
LinkDB
All DBs
Position
3:441770522..441873300
Genome browser
AA seq
1641 aa
AA seq
DB search
MSTPDPPVGGTPRPVQSPGPGPSPGAMMGPSPGPSPGSAHSMMGPSPGPPIPPQGPSGYP
AENMHQMHKPMESMHEKTMPEDPRYNQMKGMAMRPGGHSGMGPPPSPMDQHSQGYPSPLG
SSEHVPSPVPSNGPPSGPPISSSSGGVAMENPDPQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQASRSPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQPQ
MPTLPPPAASGTGPVPASGPVPPSYNRPHGMAGPAMPPPGPSGAPPGMPGHPPGAPPKPW
PEGPMANAAAPAAAPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPPPMVQ
FHSKANRITPIQKPRGLDPVEVLQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIEL
KALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQ
ERKRRQKHQEYLNSILQHAKDFKEFHRSVTGKIQKLTKAVATYHANTEREQKKENERIEK
ERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVMQHKAAQVLKEKKRRK
KKKLQENAEGQPLVLGPDGEPLDETSQMSDLPVKVIHVDSGNILTGTDAPKAGQLDAWLE
MNPGYEVAPRSDSEESGSEEEEEEEEEDLSSTPVTSQSAVEEKKIKDPDSDDVSEVCVRE
IIAIARQDVDDEYSVCNAEPEGPQLQSYYAVAHAVSEKVEKQSSLLVNGILKQYQIKGLE
WLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWVYEFD
KWGPSVVKISYKGSPAARRAFVSILRSGKFNVLLTTYEYIIKDKQVLAKIRWKYMIVDEG
HRMKNHHCKLTQVLNTHYVAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKSCTTFEQWF
NAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSAL
QRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHL
GFSGGIVQGQDLYRASGKFEVLDRILPKLRVTNHKVLLFCQMTTLMTIMEDYFAYRGFKY
LRLDGTTKAEDRGMLLKAFNEPGSDYFVFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQD
LQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHER
KAFLQAILEHEEQDEITSDNKQLILQEEDEVPDDETVNQMIARHEEEFELFMRMDLDRRR
EEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRSRKEVDYSDSLTE
KQWLKAIEEGTLEEIEEEVRQKKTTRKRKRDIDPGMSTPTTSTRIREREDDGGKKKKRGR
PPAEKLSPNPPNLTKKMKKTVDAVIKYKDSVSGRQLSEVFIQLPSRKELPEYYELIRKPV
DFRKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIE
KEEDSEGEESEEEEELEEEGSESESRSVKVKIKLGRKEKMQERMKGRRRTSRGCRAKPVV
SDDDTEEEQEEERSGSGTEED
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccccgacccgcctgtggggggcacccctaggcctgtgcagtcccccgggcca
gggccttctcctggtgctatgatgggccctagcccagggccatctcctggatcagcgcac
agtatgatgggaccaagccccggacctcctatccctccccaggggcctagcggatatcct
gcagagaacatgcatcagatgcacaagccgatggaatccatgcacgagaagaccatgccg
gaggacccacgttataaccagatgaaagggatggcaatgaggcctggtggacactctgga
atgggacccccaccaagtccaatggatcagcattctcaaggctatccgtctccattgggc
agctcggagcatgtcccaagcccagtaccctcaaatggcccaccatctggacctccaatc
tcctctagctcaggaggagtggccatggagaacccagaccctcagcagcaacaacagcag
caacaacagcaacaacaacaacagcagcaacagcaacaacagcagcagcaacaacagcag
cagcagcagcagcaacagcagcaggcgagccgcagtccaaccccttttaaccagaatcag
ctgcatcagttacgagcacagataatggcatacaagatgctggccaggggtcaaccttta
cctgaccacttacagatggctgtgcaaggcaaaaggcccatgccgggcatgcaaccacag
atgccaacactacctccacctgcagcctctgggactggcccagtacctgcctctggacct
gtgccacccagctacaacagacctcacggaatggcaggacctgccatgccacccccagga
ccctctggagctcctcctggaatgccagggcaccccccaggggctcctcctaaaccctgg
cctgaaggtcccatggccaatgctgcggccccagccgctgctcctcagaagttgattccc
ccacagccaactggccggccgtcacctgcaccccctgccgtgcctcctgccgcttcaccc
gtcatgccaccccagacgcagtcaccaggtcagccagcccagcctcctccgatggttcag
tttcactccaaagccaaccgcatcactcctatccagaaaccccggggcctggatccagtg
gaagtgcttcaggagagggaatatcgactccaggcacgcattgcacacaggatccaggag
ctggagaaccttccagggtcattagccggtgaccttaggaccaaagctaccatagagctg
aaagccttgcgtctcttaaactttcagagacagctgcgacaagaagttgtggtgtgcatg
agaagggacactgctctggagactgccctgaacgccaaggcttacaaacgcagtaaacgg
caatcgctgcgcgaggctcggatcacagagaaactggagaagcagcagaagattgagcag
gagcgcaagagacgacagaaacatcaggaatatctgaacagcattctccaacatgccaag
gactttaaagaattccaccgatctgtcacagggaagatccagaaactgacaaaggctgtg
gccacgtaccatgccaacacagaaagagaacagaagaaggagaatgagaggattgagaag
gagagaatgcgccgcctgatggctgaggatgaagagggctacaggaagctgattgatcag
aagaaggacaaacgcctggcctacctcctgcagcagacagacgagtatgtggccaacctg
accgaattggtgatgcagcacaaagctgcccaggtgctgaaggagaagaagagaaggaaa
aagaaaaagcttcaagagaatgcagaaggccaaccgcttgtacttggaccagatggcgag
cctctggatgagactagccagatgagcgaccttccagtcaaggtgatccatgtggatagt
ggaaatatcttgactggcacagatgctccaaaggccggacagctggatgcctggctagag
atgaatcctggttacgaagttgctccaagatcagacagcgaggagagcggttccgaggag
gaagaagaggaagaggaggaggacctgtcttcaacccctgtcaccagtcagtctgcggtg
gaagagaagaaaatcaaggatccggacagcgatgacgtttcggaagtttgcgttcgggag
attatcgcgatcgcccgtcaggatgtggatgacgagtacagcgtatgtaatgctgaaccg
gaaggaccgcagttgcagtcatactatgcggttgcccatgcggttagtgagaaagtagag
aagcagtccagccttttggtgaatggcattctcaaacagtaccagatcaaaggcctggag
tggctcgtatcgctctataacaataatctcaatgggatcttggctgatgagatgggtctc
ggaaagactatacagacgattgctctgatcacatacctcatggaacacaagcgcatcaac
gggccgttcctcatcatagtcccactgtcgacactatctaactgggtttatgagtttgac
aaatggggaccatctgtggtaaaaatatcatacaagggatcccccgctgctcgccgtgcg
ttcgtttctatactccgcagtggaaaatttaatgttctgcttactacatatgaatatatc
attaaagacaagcaggtcctggccaagatccgttggaagtatatgattgtagatgaaggt
catcgcatgaagaaccatcactgcaagctaacacaagtccttaatactcactacgtggcc
cctcgccgcgtgcttctcactggtacccctctacagaacaagcttcccgagctgtgggca
cttctgaacttcctgctgcccactatcttcaagagctgcaccacgtttgagcagtggttc
aacgctccctttgcaatgactggagagaaggtggatttaaatgaagaagaaactattcta
attattcgtcgtctccataaagtcctccgccctttcttacttcgaaggcttaagaaagaa
gtggaagctcagctgccagaaaaggttgagtatgtcattaaatgtgacatgtctgcatta
caaagggttctgtacagacatatgcaggccaagggagttctccttacagacggttcagag
aaggataaaaagggtaaaggtggtacgaagaccctgatgaacactattatgcagcttagg
aagatttgcaaccacccatacatgttccaacatatagaggaatcattttctgaacacttg
ggtttctcaggaggcattgtgcaggggcaggacctctaccgtgcctctggaaagtttgag
gtccttgaccgcattctccccaaattacgagtcaccaaccacaaagttctgctcttttgt
cagatgaccacactcatgaccatcatggaggattattttgcttatcgtggctttaaatac
ctcagattagatggaacaactaaagcagaagaccgtggaatgttattgaaggccttcaat
gagcctggatcagattactttgtcttcctgctcagcactcgcgctggaggcttgggcctc
aatttgcaatccgcggacaccgttgtcatctttgacagcgactggaacccacatcaggat
ttacaggctcaggatcgagctcaccgcattggtcagcagaacgaggtgcgcgttctgcgc
ctgtgcacagtaaacagcgtggaagagaagatcctggcagccgccaaatacaagctgaat
gtggatcagaaggtcatccaagctggaatgtttgatcagaaatcctccagccatgaacgg
aaggcttttctgcaggccattctggagcatgaggagcaggatgagatcacatcagacaat
aaacaattgattttgcaggaggaggatgaggttcctgatgatgaaactgtgaatcaaatg
attgcaagacatgaagaggagtttgagttgttcatgcgaatggatttggacaggcggcga
gaggaagctcgcaatcccaagcgcaagcctcgtctgatggaggaggatgagctgccatct
tggatcattaaagatgatgctgaggtggagcgtcttacctgtgaggaggaagaggagaag
atgtttggtcggggttcccgtagtaggaaggaggtggattacagcgactctctgacggag
aaacagtggctgaaggccatagaagaaggtacattggaggaaattgaggaggaggtacgt
cagaagaagaccactcgcaagcgaaagcgagatatagacccgggaatgtccactcctacc
accagcacgcggattcgggaaagggaggacgacggcggcaagaagaagaaaagaggaaga
ccaccagctgagaagctttcccccaaccctccaaacctcaccaagaagatgaagaaaact
gtggatgcagtcatcaagtacaaggacagcgtttcgggacgtcaacttagcgaggtcttc
attcagctcccttcccgaaaagaactgccagagtattacgagctgatccgcaaacctgtg
gacttcaggaagatcaaggagaggatcagaaatcacaagtaccgtagtctgaatgacctg
gaaaaagacgtcatgctgctatgtcagaacgctcagaccttcaaccttgaagggtctctg
atatatgaagactccattgtgctgcagtcggtcttcaccagtgtgaggcagaagatcgag
aaggaagaggatagtgaaggggaagaaagtgaagaggaggaggaattggaggaagaaggc
tcagaatctgagtctcgctccgttaaagtgaagattaagctgggtcgtaaggagaaaatg
caggaacgaatgaaggggcgcaggcgcacaagcaggggttgcagggccaagcctgtggtc
agtgatgacgacaccgaggaggagcaggaggaggaacgctcaggaagcggcactgaagag
gactga
DBGET
integrated database retrieval system
