Rana temporaria (common frog): 120933385
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Entry
120933385 CDS
T07929
Symbol
GTF2F1
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120933385 (GTF2F1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtem03021
]
120933385 (GTF2F1)
Transcription machinery [BR:
rtem03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
120933385 (GTF2F1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
120933385
NCBI-ProteinID:
XP_040202519
LinkDB
All DBs
Position
3:447497944..447529158
Genome browser
AA seq
521 aa
AA seq
DB search
MTSLGGSAQSVTEYVVRVPRNPSKRYNVMAFNSADKVDFATWNQARMERDLSAKKMYQDE
ELPDAGAGSEFNRKLREESRRKKYGIILKQFKVDDQPWMLRVNGKAGRKFKGIKKGGVTE
NASYFIFTQCPDGAFEAFPVSNWYNFTPVAKHRTLTAEEAEQEWERRNKILNHFTIMQQR
RLKDQGGEGDDDEEGGGKQDKGGKSKKKKKSDLKIHDLEDDLEMSSSESEGSGDEDEQRT
KTKKKNAKNKKKKKKQADEGIEDSDDGDFEGQEVDYMSDKSSSSDEELPGKPKVTKEDQD
VPKGIDEASSSSEESEEEKVEEEEDEEKKPATPQEKKRKRDSSEESDTSDDSDIDKEASS
ALFMQKKKTPPKKDKKGGSNNSSRGNSRPGTPSPDSANTSNTLKAAASKLEQGKRGALPH
TPAAKRLKMEAGPQSASGKSTPQPQSGKSTPSSGDVQLTEEAVRRYLTRKPMTTKDLLKK
FQTKKTGLSSEQTVNVLAQILKRLNPDRKTIHDKMHFYLKE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccctggggggaagcgctcagtctgtgacggagtatgtcgttcgcgttcccagg
aaccccagtaagaggtacaacgtcatggccttcaattctgcagataaagtggacttcgct
acatggaaccaggctcgcatggagcgtgacctgagtgctaagaaaatgtaccaggatgag
gaactgcctgacgctggggctgggagcgagtttaatcgcaagctgagggaggagtccaga
cgcaagaaatacggcatcattctcaaacagttcaaggtggacgaccagccctggatgctg
agggttaacggcaaggctggacgcaagtttaaaggaattaaaaaaggcggagtcacggag
aatgcctcctacttcatcttcacccagtgtccagatggagcgtttgaagcgttcccagtc
tccaactggtacaattttactccagtggccaagcatcggacgctgactgcagaagaggcc
gaacaggaatgggaaaggcgaaacaaaatcctgaaccacttcaccatcatgcagcagcgc
cgcctgaaggaccaaggcggagagggtgatgatgatgaggaaggtggcggaaaacaagac
aagggtgggaaaagcaagaaaaagaagaagagtgacctgaaaatccacgatctggaagat
gacctagagatgagctccagcgagagcgagggcagcggagatgaagatgagcaacggaca
aagactaagaagaaaaatgcaaaaaataagaaaaagaagaagaagcaggctgacgaaggc
atagaggacagtgatgatggcgactttgaaggacaggaagtagactacatgtccgataag
agcagcagctcagatgaggaacttcctggcaagcccaaagtcaccaaggaggatcaggat
gttcctaaagggattgatgaggcaagctcgagtagcgaggagagcgaagaggagaaggtg
gaggaggaagaggatgaagagaagaaacccgccacacctcaggagaagaagaggaagaga
gacagcagcgaggaatcggacacatcagatgacagtgatattgacaaagaggcttcctct
gctcttttcatgcagaaaaagaaaactcccccaaagaaagataaaaaggggggctccaac
aacagctcccgcggtaacagtcggcctggcacaccgtctcctgattccgccaacacttcc
aacactctcaaagctgcagccagtaaactggaacaaggtaaacgtggcgctctccctcat
acgccggccgcaaaacgtctaaaaatggaggccgggcctcagagcgcatctggaaaatcg
accccacagccgcagtcaggaaagtccacaccaagcagcggggacgtccagcttacggaa
gaggccgttcggcggtacttgactcgcaagccaatgactacaaaagacttgctgaagaag
ttccagaccaagaagacgggactgagcagcgagcagaccgtgaacgtgttggcccagatt
ctgaagagactgaaccccgaccgtaaaaccatacacgacaaaatgcacttctacctgaag
gaatga
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