Rana temporaria (common frog): 120933492
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Entry
120933492 CDS
T07929
Symbol
TAF6
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120933492 (TAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtem03021
]
120933492 (TAF6)
03036 Chromosome and associated proteins [BR:
rtem03036
]
120933492 (TAF6)
Transcription machinery [BR:
rtem03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120933492 (TAF6)
Coactivators
SAGA/TFTC/STAGA complex
120933492 (TAF6)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
120933492 (TAF6)
STAGA complex
120933492 (TAF6)
TFTC complex
120933492 (TAF6)
SAGA complex
120933492 (TAF6)
SLIK complex
120933492 (TAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
Bromo_TP
TFIID-18kDa
DUF3275
Motif
Other DBs
NCBI-GeneID:
120933492
NCBI-ProteinID:
XP_040202659
LinkDB
All DBs
Position
3:complement(458358605..458441572)
Genome browser
AA seq
620 aa
AA seq
DB search
MAEGKKIGNALLPSESMKVIAESIGVSQMSEETCQMLTQEVSFRIKEVTQDAMKFMHVGK
RQKLTPNDIDAALKLKNVEPIYGFHAKEFLPFRYASGGGRELHFYEEKEVDLCDIISTPL
PRVPLDVSLKAHWLSIEGVQPAIPENPPPVPKEQQKMEATEPLKAAKPGQEEAGRKGQGA
NAVEVKEKKNTIIEGAPLKLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIAT
DPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNTTLYLEKYLHELIPAV
MTCIVSRQLCLRPDVDNHWALRDFAARLIAQICKNFSTTTNNIQSRITKTFTKSLVDERT
PWTTRYGSIAGLAELGPDVIKTLIVPRLLLEGERLRAILEGQVLSNIDKIGADHVQSLML
KHTAPVLVKLRAPPDVPETYRTEYGFLGPTLCSHVMKARAQSALQGPQVNRTTLTVTQPR
PTLTLSQPTSGSITPSPRPPGIIKVPGSLTLPVQTLMSTRPATPTQPSPPPTKFIVVSSA
GSSGTQVLTSSSGPSPSTPCPPGVQPIVKLVSGGQSSGVGGSATGGSSGMQKYIVVSLPT
AGESKTPQPSPPPTAETPGL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggggaagaagatcgggaacgcgctcctccccagcgagtccatgaaagtgatt
gcagagtctataggggtgtcccagatgtcagaggagacctgccagatgctcacacaagaa
gtcagcttccggattaaggaagtcactcaggatgctatgaaattcatgcacgttggtaag
aggcagaaacttacccccaatgacatcgacgctgctctaaaactgaagaatgtggagcct
atatacggtttccatgcaaaggaatttctgccgttccgttacgccagtggtggagggcgg
gagctgcacttctatgaagagaaagaggttgatctgtgtgatataatcagcaccccactt
cctcgtgtgcctctcgatgtctccttgaaagctcactggttaagtatcgaaggagttcaa
cccgccatcccagagaacccccctccagtcccgaaggagcagcagaagatggaggccact
gagcccttgaaggctgccaagccaggacaagaagaggctgggcggaaaggacaaggggca
aatgctgttgaggttaaggagaagaagaacaccattatagaaggtgcacctctgaagcta
aagccacgcagcatacacgagttgtccgtagaacagcagttgtattacaaggagattaca
gaggcgtgcgttggttcctgtgaagccaagagagcggaagcactacagagtattgccact
gaccctggcctgtatcagatgcttcctcggttcagcactttcatatcagaaggggtgcgt
gtgaatgttgtgcagaataacctggcactgcttatttatctcatgcgaatggtaaaagct
ctgatggacaacaccactctgtatctagagaaatatctccatgaactcattccagctgtg
atgacgtgcatcgtcagccggcagctttgtctgcgcccggatgtggacaatcactgggca
ttgagagactttgccgctcgtctcattgcacaaatctgcaagaacttcagcaccacaacc
aacaacatccaatccaggataaccaagacatttaccaagagtttggttgacgaacgcact
ccctggacgacccgatacggctccattgccggccttgcagaactgggacccgatgtgatc
aaaactctgattgtccctcgtttgttgctggaaggagagcgactacgcgccatcctggag
ggtcaggttctttccaacatcgacaaaattggagctgaccacgtccaaagcctcatgctg
aaacacaccgctccagtcctggtgaaattgcgcgcccctccagatgtcccagaaacatac
cgtacagaatatggcttcctgggtcccactctgtgctctcatgtgatgaaggctagggcc
cagagtgctttgcaggggccccaggtcaaccggaccactctgacagtcacacagcctcgc
cctacactcaccctctctcagccgacctccggctccatcacgccatcccctcgcccacct
gggataattaaggtgcctgggtccttgactttgcccgtacagaccttaatgagtacccgg
ccggccacccctactcagccttcaccaccacccaccaagttcattgtggtgtcttcagca
gggagcagcgggacccaggttctcacctcttcaagcggcccttccccatccacgccgtgc
ccccctggggtccaacccattgtgaaacttgtgtccggtgggcaaagcagcggtgtaggg
ggctcagcgactggtggcagcagcggaatgcagaaatatatagtggtgtctcttccaacc
gccggagaaagcaaaacccctcaaccctcccctccccccacagcagagacccccggcttg
tga
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