Rana temporaria (common frog): 120933574
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Entry
120933574 CDS
T07929
Symbol
CHRNE
Name
(RefSeq) acetylcholine receptor subunit epsilon isoform X1
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120933574 (CHRNE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtem04040
]
120933574 (CHRNE)
Ion channels [BR:
rtem04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
120933574 (CHRNE)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
120933574
NCBI-ProteinID:
XP_040202779
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Position
3:complement(466482039..466543964)
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AA seq
533 aa
AA seq
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MGVHLPFWFLLSFLCYSLASEELQLLNDLFSNYDKNARPAKSIHDIIQVRLKLTLTNLIS
LNEKEETMTTNVWLQLEWDDYRLTWNESDYGGVAVLRVSPDNVWLPDIVLENNVDGQFEV
AYYANTLIHSNGYISWLPPAIFRSACPVVVTYFPFDWQNCTLVFRSKTYNAKEVTLLLAF
GESGELLERVDIDPEAFTENGEWAIKHCPAWKYVNHRFTEDDLQYQEINFGLVIQRKPLF
YIVNIIVPCVLISSLVVLVYFLPAKAGGQKCTTSISVLLAQVVFLFLIAQKVPETSLSVP
LIGKYLIFVMIVSTLIVLSCVIVLNVSLRTPSTHNLTATIKRRLLEVLPRYLHMKVEPCE
EEEATPKERRKSSLGIMLKAEEYVLKKPRSELMFERQRERHGLSRDSRGHRGEEEGEPKG
KKGQWRWRIVDGFDVGVTTPLFKNLAHCAPEIKECVEACNFITSSTKDQNKTSAEMENWV
MIGKVIDVLCFWGALPLFVVGTLAIFFMGHFNNAPDHPFKGGGRQFPLCTTSS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtccatcttcccttctggtttctactttctttcctgtgctattcactggccagt
gaggagcttcaactgttaaacgacttgttttcgaactacgacaaaaatgctcgtcccgcc
aaatccatccatgacatcatccaagttcgtctgaaactcacactgaccaacctcatctcc
ctgaatgagaaagaggagactatgacaaccaatgtgtggctccagctggaatgggatgac
taccgcctcacgtggaatgagtcagactatggcggggtagcagtcttacgggtttcacct
gacaatgtctggttgccggacatcgttttggaaaacaacgttgatggccaatttgaagtg
gcgtattacgccaacaccctgatacatagcaacggctacatttcttggctcccgccggcc
atcttcaggagtgcgtgccctgtggtggtcacctacttcccttttgattggcagaactgc
acactggtgttcagatcaaaaacatacaatgcgaaagaagtcactcttcttttggctttt
ggcgagagcggggagctgttggagcgggtggacattgaccctgaggctttcacagaaaac
ggtgaatgggcaataaagcactgccctgcgtggaagtatgtgaaccatcgctttacggag
gacgaccttcagtatcaagagattaattttgggcttgttattcaaaggaagcctcttttc
tacattgtcaacatcatcgtaccctgtgtcctcatctcctccctggtagtgttggtctat
ttcctgccagccaaagccggtggccagaaatgtaccacctctatctcggttctccttgct
caggttgtgttcctgttcctgattgctcagaaggttcccgaaacatctctaagtgtccca
cttattggaaaatatctgatatttgtgatgatcgtctcaacgcttattgtgctcagttgt
gtcatcgttctgaacgtgtctctgaggactcccagcacgcacaacttgacggccaccatc
aaacggaggctcctggaggtcttacctcgatacctccacatgaaggtcgagccatgcgag
gaagaagaggcgacaccaaaagagaggaggaagagctctctggggatcatgctgaaggcc
gaggagtacgtgctgaagaaaccccggagtgaactgatgtttgaaaggcagagggagcga
cacgggctgagccgggactcccggggccacagaggtgaagaggagggcgagcccaaaggc
aaaaaggggcagtggaggtggcggatagttgatggatttgatgtcggggtgactactccc
ctatttaagaatctcgcccactgtgccccggagataaaggagtgtgtggaggcctgcaac
ttcattacctccagcacaaaggaccagaataagaccagtgcggaaatggaaaactgggtc
atgatcgggaaagttatagatgtcttgtgtttctggggagcacttcccctcttcgtggtg
ggcaccctcgccatcttcttcatggggcacttcaacaacgcgccagaccacccctttaaa
ggcggcggacgccagtttcccctgtgtacaacttctagttaa
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