Rana temporaria (common frog): 120933576
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Entry
120933576 CDS
T07929
Name
(RefSeq) platelet glycoprotein Ib alpha chain-like isoform X1
KO
K06261
platelet glycoprotein Ib alpha chain
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120933576
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
rtem04090
]
120933576
CD molecules [BR:
rtem04090
]
Proteins
120933576
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
120933576
NCBI-ProteinID:
XP_040202783
LinkDB
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Position
3:466563175..466615794
Genome browser
AA seq
945 aa
AA seq
DB search
MVAMSPVFCFGIFGLLCANYVSSSCITEDNENKGLKETSCVRLALTNIPKKEIPQDTGIL
IMSFNNLKAISTSTFKGMKRLVELDLSHNALTSFKVDLPIMLQELNLDNNSFKSIPDLSQ
LSSLTKLVLSNNHISTIPDSAFKGLNNLKVLKLQKNTINSLSEEVFHDLKSLDHLDLSHN
QLWELPNHLILNLVHLTKFSLAENKLTNIPDEFFDGLNSLAYVYLDKNPWNCNCALRYFK
EWVEDNGYNIYTILPDGFPINDEKSVLCSDKTPLIEHNMDACIGRDLGDADQHITEPWIT
TTKSTRVPLAKTTPVLTTEKHPTSDTTTTKSRRLTKPIMTSTKQPETTPTADFSPTKVAT
SSVFCFWIFGILYGNRVSSSCITEGNKSKGMKETSCVRLALTSIPIKKIPQDTGILTLSF
NNLKAISTSTFKGMKRLVELDLSHNALTSFKVDLPIMLQELNLDNNSFKSIPDLSQLSSL
TRLVLSNNHISTIPDSAFKGLNNLKVLELQKNTINSLSDKVFYDLKSLDLLDLSNNQLWE
LPNHLILNLVHLTKFSLAGNILTNIPDNFFDGPNSLAYVYLDKNPWNCNCALHYFKEWVE
DNGHNVYTILPDGSPFNDEKSVLCSDKTPLIEYNMDACLGSDHGDLGDVDQHIMTPKSKV
TQALPTTAKTTEPWITTMKTTMVTFAKTTPVLTTEEHPTSVATTTKSRRMTTPITTSTKQ
SETTPTGMPTWTTRKVTTKTYKTTLMTTAEQRRTTPQTTEVPTSISSTTTLHPTSTLATT
VKVEPSTMLTTSTVSPQKHLTETSLMSTENQLLYTMPPAENSRAEAHGMSWLKYKILKNC
CFLHLVIYIFGILLLIAQMILSACLLVYTHTHLYRHYQALTEKLPNIRLIRYSLRAPVSE
GTILLVHDKVMESNFSDQSFSGVTRMLVLEANTRDQARLYTSAIL
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggtagccatgagtcccgtgttttgtttcgggatctttggtctcctttgtgccaactat
gtctcctcttcctgtatcacagaggataatgaaaacaaaggcttgaaagagacgtcttgt
gttcgacttgccttaaccaacatcccaaagaaggagataccccaagataccggcattctt
atcatgagttttaataacctgaaggccatctccacctcgaccttcaaagggatgaaacgg
ctggtggagctggacttatcacacaatgctttgactagctttaaggtggaccttccgatc
atgttacaagaattaaatctggacaataactcattcaagagtatcccagatctgtcccaa
ctgtccagcttaaccaagctagtcctgtccaacaatcacatttccaccatccctgactcg
gcattcaagggactgaataacctgaaggtgttgaagctccagaaaaataccatcaactcg
ctttcagaagaggtttttcatgacttgaaaagtttagaccatctggatttatcgcacaat
cagctgtgggaacttccaaaccatctcatcctcaaccttgtccatctcacaaaattttcc
ttggcagaaaacaaactgacaaacattccagacgaattctttgatggcctgaattctctt
gcttatgtgtatcttgacaagaacccgtggaactgcaactgtgccctccgctattttaag
gaatgggtggaagataatgggtataatatctatactatactgcctgatggatttccaatt
aatgacgagaaaagtgttctctgctctgacaagaccccacttattgaacataatatggat
gcatgtattggtagggaccttggtgatgccgaccaacatataacagaaccatggataacg
acaacgaagtctacaagagtccctttggcaaaaactacacctgtgctgaccacagaaaag
catccaacgtcagatactacaactacaaaaagcagaagattgacaaaaccaatcatgact
tcaacaaaacagccagagacaactccaacagccgactttagccccaccaaggttgccacg
agctctgtgttttgtttctggatctttggtatcctttatggcaaccgtgtctcctcttcc
tgtatcacagagggtaataaaagtaaaggcatgaaagagacgtcttgtgttcgacttgcc
ttaaccagcatccccataaagaagataccccaagatactggcattcttaccctgagtttt
aataacctgaaggccatctccacctcgaccttcaaagggatgaaacggctggtggagctg
gacttatcacacaatgctttgactagctttaaggtggaccttccaattatgttacaagaa
ttaaatctggacaataactcattcaagagtatcccagatctgtcccaactgtccagctta
accaggctggttctgtccaacaatcacatttccaccattcctgactcggcattcaaagga
ctgaataacctgaaggtgttggagctccagaaaaataccatcaactcgctttcagacaag
gttttttatgacttgaaaagcttagaccttctggatttatcgaacaatcagctgtgggaa
cttccaaaccatctcatcctcaacctcgtccatctcacaaaattttccttggcaggaaac
atactgacaaacattccagacaatttctttgatggcccgaattctcttgcttatgtgtat
cttgacaagaacccgtggaactgcaactgtgccctccactattttaaggaatgggtggaa
gataatgggcataatgtctatactatactgcctgatggatctccatttaacgatgagaaa
agtgtactctgctctgacaagaccccacttattgaatataatatggatgcatgtcttggt
agtgaccatggtgaccttggtgatgtggaccaacatataatgacaccaaaaagtaaagtc
acacaagcgctgccaaccactgccaagacaacagaaccatggataacgacaatgaagacc
acaatggtgacgttcgcaaaaacgacacctgtgctgaccactgaggagcatccaacatca
gttgctacaactacaaaaagcagaagaatgacaacaccaatcacgacttcaacaaaacag
tcagagacaactccaacaggcatgccaacttggacaacaagaaaagttaccacaaaaaca
tataagactactttgatgacaactgctgaacaaaggagaacgactccacaaaccacagaa
gtgccaacatctatttcttcaacgaccactttgcacccaacttctactcttgccaccaca
gtgaaggtggaacccagtacaatgctaaccacctccactgtgtcaccacaaaaacatctt
acagaaacatcgctgatgtctactgagaatcagttattatacaccatgccaccagcagaa
aattcccgagcagaagcccacggcatgtcatggctgaagtacaagattctcaaaaactgc
tgcttcctccaccttgtcatctatattttcggtatacttctacttatagcccagatgatc
ctatcagcatgcctgttggtttatacccatacacatctctataggcattatcaggccctc
acggagaaattaccaaacatacggctgatccggtacagcctgcgagccccagtgagtgag
ggtacaatactgcttgttcacgataaggttatggaatccaacttcagtgaccagtcattc
tctggggtgacgagaatgttggtgctggaggccaataccagggaccaagcaagattatac
acctcggccattctgtag
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