Rana temporaria (common frog): 120933689
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Entry
120933689 CDS
T07929
Symbol
GIGYF1
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120933689 (GIGYF1)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120933689 (GIGYF1)
Surveillance factors
Other surveillance factors
120933689 (GIGYF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
120933689
NCBI-ProteinID:
XP_040202963
LinkDB
All DBs
Position
3:complement(482521917..482596579)
Genome browser
AA seq
1069 aa
AA seq
DB search
MAAETLNFGPEWLRALSSGGSVASPPPSPAMPKYKLAEYRYGREEMLALYIKENKVPEEM
QDKEFAVILNEEPLQPLALLPLTEDEQRNFSMSVNSVPVLRLMGKSAAPPTAGAAPRGRG
TARGRGRGRGDAAVFPRPADEAEPGFGRGREIHRSQSWDDSRIPPAAHPDQRCGIMSESG
PAVRYSEPGGTCGIKSEAAPAIRGDRRFEKPVRREAVRVGFEEAAAARKEFARSDSDNWR
TLRDGQEEDEDGNWRLAVSRRDERWRSTSPGGTEGPRSAGWREPGERRRKFDFDVVPEEG
RGSGQRGRGSDGAHGDDRDGLPEWCMEDEDDEMGTFDSSGAFLSFKKSPKETIVEEQELE
FLGVEEDYEEEKGDNSTGDKLNGEDSLALSEEILLEPSSTSPDSANSMWASGMFGEMESE
RCPEMSSSTPEADGAISSEQTPLPADDGGDPGPFIPSPLSSLPPPSSSPPHAATEFSVGD
PEEDEGMKHLQQEAEKLVASLQDSSLEEDGFSSRSHSAAALPLGHEAAMKWFYKDPQGEI
QGPFSTQEMAEWCQAGYFTMSLLVKRGCDEGFQPLGEVIKMWGRVPFAPGPSPPPLLHNH
PKGFRLPQGNIDQQCLKKQQELALYQQLQHQYILQVLGRQSSYSQQKSGDLTPQQQQQLT
LFLQQLNPSKSRGSDASLLPSMNRSLSVPDTGSLWDLNTSNTSTAGADSNLWDLPVTSVS
QGPILEQLQLQQKLQERRDAELRAKREEDDRKRRDEKRRQEEQKRRDQEEEMYRRKQLQI
EQRLGDKLHMLSLSRQQQELLLKLIQQSGQQSQSQVWAAHSKGLSLKAMLEMQEREGQLL
KQRGQTSRNVHGGLGMSSSSSIIPSQWGSDSGSLWGGLEKSPWEESVKSGASARGLRNSR
SSPSLTDAYAASAARRKKTEEEEKLLKLLQGIKPSDGFTQWCEQMLHMINTSNNLDVPTL
VAFLKELESPYDVHDYIRSCLGETLEAKEFAKQFLERRAKYKASQRQQQEAAWMAPTMFP
ATQNSKPGSGYDVQSSKMKRRIQMLHSDPSILGYSLHGSPNEMEAIDDY
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgaaacactaaattttgggccagaatggctccgtgcactatccagtggggga
tcggttgcttcccctcctccctcccccgctatgccaaagtataaactggcggagtatcgc
tatggaagagaggagatgttggcactttatataaaagagaacaaggttccagaggagatg
caagacaaggagtttgctgtgattctaaacgaggagcccctgcagcctctggctcttctg
cctcttacagaggatgagcagaggaacttctcgatgtcggtgaatagcgtcccagtcctg
aggctgatgggaaagagtgcagctccacctactgcaggagcagcacccagaggtcgtggc
acggcacgtggaaggggtcgcggccgcggtgatgcggctgtattcccgcgccctgcggat
gaggcagaacccggatttggacgaggacgggaaattcaccggagtcagagctgggatgac
agtaggattcctccagctgcacatccggaccagcggtgtggtattatgagcgagtcggga
ccagcggtgcggtactcggagccaggcgggacgtgcggtattaagagcgaggcggcacca
gcgataaggggagacagaaggtttgagaagcccgtccggagagaagctgtacgagtcggg
tttgaggaagccgccgctgcacggaaggaatttgcccgctcggacagcgataactggcgc
acgttgcgcgacgggcaggaagaagacgaggacggcaattggaggctcgctgtgtcccgg
agagatgaacgctggagatctaccagtcccggaggaacagagggtcctcgctccgccggg
tggagggaacccggtgaacgacggagaaagtttgatttcgacgtggtgccggaggaaggc
agaggttcagggcagcgaggaagaggttcagatggtgcacacggggatgatagggatggc
cttcctgaatggtgtatggaggatgaggatgatgagatgggaaccttcgactcctctggg
gccttcttatctttcaagaaaagccccaaggagaccattgtggaggagcaggaactggag
ttcctgggggtggaggaagattatgaggaggagaagggggacaacagcacaggagacaag
cttaatggtgaagactcattggccctctctgaagaaatcctcctggagccttcctctacc
tctcctgactctgccaattccatgtgggcatcgggaatgttcggtgagatggagagcgag
cgatgccccgagatgtcctcctccaccccggaagcagacggtgcgatttccagcgagcag
actccgctcccagccgatgacggtggagaccccggaccctttattccttcccccctgtcc
tctctgccgcctccttcctctagtcccccccatgctgctactgaattctctgtgggggat
ccggaggaggacgaaggcatgaagcatctccagcaggaagcggagaagttggtggcttct
ctgcaggattcttccctggaggaagatggcttctcttcccgctctcacagtgctgctgct
ctgcccctcggccacgaggctgccatgaaatggttctacaaggaccctcagggggagatc
caaggtccattcagtacacaggaaatggctgaatggtgccaggctgggtactttaccatg
tcactgttagtgaagagaggatgtgacgaaggcttccagcccctgggtgaagtcatcaag
atgtggggacgggtcccctttgctcctgggccctccccaccacccttactgcacaatcac
ccgaaaggatttcgacttcctcagggtaacattgatcagcagtgcctgaagaaacagcag
gagctcgccctctaccaacagctgcaacatcagtatatactgcaagtgcttggcagacag
tcgtcgtactcccagcagaaatccggagatctgactccacagcagcagcagcaactgaca
ctgttcctccagcaactgaacccttctaagtccagaggttccgatgcttccctccttcct
tctatgaacagatctctctctgtgccagacactggatccttatgggatctgaatacctca
aacacatcgactgcaggtgcggactccaatctgtgggacctgccagtcacatctgtatct
caggggccaatattggagcagctgcaactgcaacagaagttgcaggagcgcagagacgca
gaactcagggctaagcgtgaggaggacgataggaagaggagagatgaaaaaaggagacaa
gaagaacagaagaggagagaccaggaggaggagatgtacagaaggaagcagctccagata
gaacagaggctaggggacaagctgcacatgctcagtttgtcccgccagcaacaggagttg
cttctgaaactcatccagcagagtggacagcaaagtcaatctcaagtgtgggccgctcat
agcaaagggctctctttgaaagccatgttggagatgcaggagagagaggggcagcttcta
aagcagagaggacagacgtctcgcaatgtgcatggaggtctgggaatgtcgtctagttcc
tccatcattccttcccaatgggggtctgactcgggctctctatggggaggtctggagaag
agcccttgggaggagagtgtgaaaagtggggcaagtgccagaggtctgaggaacagccgg
agtagcccatcactgactgacgcgtatgcagccagcgccgcccgccgcaagaagacggaa
gaggaagaaaagctcttaaaactccttcagggaatcaaaccgtcggacggcttcactcag
tggtgtgagcaaatgctacatatgatcaatacatccaacaatttggacgttcctacgctg
gtggcctttttgaaggagctggagtctccttacgatgttcacgactacatccgctcctgt
cttggggaaacgcttgaagccaaagaatttgctaaacagtttttagaacgaagagcgaag
tacaaagccagccagcggcagcagcaggaagctgcctggatggctcctaccatgtttcca
gcaacccaaaattccaagccaggcagtggatacgacgtacagagcagcaagatgaagagg
cggattcaaatgttacactcggatcccagcattctgggttactctcttcacggctcccca
aacgagatggaggctatagatgactactga
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