Rana temporaria (common frog): 120934122
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Entry
120934122 CDS
T07929
Symbol
SBNO1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120934122 (SBNO1)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120934122 (SBNO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
BUD22
Motif
Other DBs
NCBI-GeneID:
120934122
NCBI-ProteinID:
XP_040203224
LinkDB
All DBs
Position
1:182319673..182455583
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AA seq
1408 aa
AA seq
DB search
MMDPNQDLLLAALSECGISPNDLFDGDSLDIGLLAPSQAPVTQQSVPIGALSGNKEIEAS
VSVKQEAVSLTTPALLNVRPPSTTTFVLNQINQLPQLGNTIVMSKTPPVTTTRQTITVTK
ILQTSATTRPSTAATVTTAPTKEQIQLKDLLKNSSLNKLMKLKPPSNIAQPVATAAKFVI
FSPKVVSATKPADLLNGAKKDITNKEVTRIWINDDIKMRSFSPTNKVKEEDEPEEEDEDE
MGHAETYAEYMPIKLKVGLRHPDPVVETSSLSSVTPPDVWFQTSIPEESIDHGWLSALQL
EAVTYAAQQHETFLPNGERAGFLIGDGAGVGKGRTIAGIIFENYLLSRKRSLWFSVSNDL
KYDAERDLRDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYK
TRLKQLLHWCGEDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVIYAS
ATGASEPRNMAYMSRLGIWGEGTPFREFNDFIQAVERRGVGAMEIVAMDMKLRGMYIARQ
LSFTGVSFKIEEVPLRHDYVKMYNKSVKLWVLARERFQQAADLIDAEQRMKKSMWGQFWS
AHQRFFKYLCIASKVRRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVS
TAKGVFQSLIEKHFPAPDRKKLLNLLGIDLSQQSSNNSPRDSPSKDSKTKKRKGEELSRE
AKKPRKTGGLAGSSSDEMDSETSASDKEAESESESFKSISSGDDEDDFNPFRDESSEDNE
DDPWLIRKEHKKSKDKKKKKKSIDPDSIQSALLASGLGSKRPSFSSVKSVPTIAASSLPA
VTSSALSTNFNSSNSCVTSQDSVERAQQMKKELLDILDELAEALPPNTLDELIDELGGPD
NVAEMTGRKGRVVSNDDGSISYESRSELDVPVEILNITEKQRFMDGEKNIAIISEAASSG
ISLQADRRAKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRF
ASIVAKRLESLGALTHGDRRATESRDLSRFNFDNKYGRNALEIVMKSIVSLDAPLVSPPP
DFPGDFFKDVRQGLIGVGLINVEDRSGILTLDKDYNNIGKFLNRILGMAVHQQNALFQYF
SDTLSAVIQNAKKNGRYDMGILDLGSGDEKVCKADVKKFLTPGYSTSGHVELYTISVERG
MSWEDATKIWAEQIGPEDGFYLSQQIRNNKKTAILVKEINPKKKLFLLHRPNTGKQLKLE
TLSDLRKKYKKVPSDDAYAHWKEQYTSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYY
VLCGSVLSVWTKVEGVLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCFSSLVTLLSTS
DQSQQIAVQQQHMWQQLHPQSISNFSTL
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgatggatccaaatcaggatttgttacttgctgctctgagcgagtgtggcatcagccct
aacgacctttttgatggtgattccttggatataggtctacttgctccaagccaagccccc
gtcacccagcaatctgtgccaattggtgctttaagtggaaacaaagagattgaagcatca
gtttctgtaaaacaagaagcagtgtctctaacaaccccagcattgctgaatgtccggcct
ccatcaacaacaacatttgttctgaatcaaattaaccagttaccacagcttggcaacaca
atagtgatgtcaaaaacacctcctgttactaccacccgacagactattacagtaacaaaa
atccttcaaacaagtgctacaacaaggccatccacagctgccactgtgactactgcacca
acaaaagaacaaattcagttgaaggatctactaaaaaatagcagtctaaataaattaatg
aaactgaaaccgccttcaaacattgcacagccagttgcaacagcagcaaaatttgtaata
ttttctccaaaggtggtaagtgccaccaaaccagctgatcttctcaatggtgcaaaaaaa
gatattactaataaggaagtgacaagaatttggatcaatgatgacattaagatgagaagt
ttttcacccactaataaagttaaagaggaggatgaaccagaggaagaagatgaagacgaa
atgggacatgcagagacctatgcagaatacatgccaattaaacttaaagtgggactgcga
catcctgatcctgttgtagaaaccagctctctgtctagtgtgacgccaccagatgtttgg
tttcagacttctatccctgaggaatccattgaccatggctggctatcggctctgcaatta
gaagctgtaacttatgctgcacagcaacacgaaacgtttcttcctaatggtgaaagagct
ggattcttaattggtgatggtgctggagttggcaaaggaagaaccattgctggaatcata
tttgaaaattatttgttaagtaggaaaaggtcgctgtggtttagtgtgtcaaatgactta
aagtatgatgcagaaagagatctgagagatattggagcaaaaaacattcaggttcattct
ttaaataagtttaaatatggcaaaatctcatcaaaacataatggaagtgtgaagaagggt
gtcatatttgctacctattcttctctgattggtgaaagtcaatcaggtggtaaatataaa
actcgtttaaagcagcttcttcattggtgtggagaggactttgatggtgttattgtattt
gatgaatgtcacaaggctaaaaatctgtgtccagttggttcatcaaaaccaacaaagact
ggtttagcagtattggagctacaaaacaagctgcctaaagccagggttatatatgctagt
gccacaggtgcctctgaaccaagaaacatggcttatatgagtcgtttaggaatctggggt
gaaggcactccttttagagagtttaatgacttcatccaggcagtggaaagaagaggtgtg
ggtgccatggaaattgttgcaatggatatgaaactgcgtggcatgtatattgcaagacag
ctgagctttactggtgtgagcttcaaaattgaagaagttcctcttcgccacgattatgtc
aaaatgtacaataaatcggtgaaactgtgggtattggccagagagcggtttcaacaagct
gctgatttaattgatgctgagcaacggatgaagaaatccatgtggggtcagttctggtcg
gcacaccagagatttttcaaatacctctgtattgcatccaaagttagaagggtggtccag
cttgctcgtgaggaaataaaaaatggaaagtgtgtggttattggtctgcagtcaactgga
gaggcaagaactcttgaagctttggaggaaggtggtggagagctaaatgactttgtgtct
acagcaaaaggagtatttcaatctctaattgaaaaacatttccctgctcctgatcgaaag
aaactcttaaatttactaggaattgacctatcgcaacaaagcagtaacaattctcccaga
gacagcccttctaaagatagcaagacaaagaagaggaaaggtgaggaactgtctcgcgag
gccaaaaaacccagaaaaacaggcggacttgctggtagcagctcagatgagatggacagt
gagacttctgcatctgataaggaagcagagagtgaaagtgaaagctttaagtctattagc
tctggggatgacgaagatgattttaacccttttagggatgaatccagtgaagataacgaa
gatgatccctggctaattagaaaagaacataagaaaagtaaggataaaaagaagaagaaa
aaaagcattgatccagattccattcaaagtgccttattagcttcaggacttgggtctaaa
cgtcctagcttttcatctgttaaatctgttcccacaattgctgcttctagccttccagcc
gttacaagtagtgctttatccacaaacttcaattccagcaacagttgtgtcactagtcaa
gattcagtggaaagggcccagcaaatgaaaaaagaacttttggacatactggatgaactg
gcagaagcacttcctccaaacacattggatgaacttattgatgagcttggtggtcctgat
aatgtagcagagatgactggccggaagggcagggtggtcagcaatgatgatggaagtata
tcatacgagtcacgatcggaacttgatgttcctgtagaaattcttaatatcactgaaaag
caaaggtttatggatggtgaaaagaatatagcaatcatctcagaagctgccagttcagga
atatccttacaagctgaccgcagagctaaaaaccagagaagaagggtacacatgaccctg
gaattgccttggagtgcagaccgtgccattcagcagtttggtagaacgcatagatctaat
caagttactgctccagaatatgtcttcctcatttctgaattggctggagagcaaagattt
gcttcaattgttgcaaaaagattagaaagtttgggggccttaacgcatggtgacaggaga
gcaacagaatcgagagatctgagccgcttcaactttgataacaagtatggaagaaatgct
ttggagatagtcatgaaatcaattgtgagtttggatgctccattggtttctccacctcca
gattttcctggcgatttttttaaagatgttcgtcaagggttaattggtgtcgggcttata
aatgttgaagaccgttcaggaattttgactcttgataaagattacaacaatattggaaaa
tttcttaaccgtattctgggtatggcagtccaccagcagaatgccctatttcagtacttc
tctgacacactcagtgcggttatacagaatgcaaagaaaaatggcagatatgacatggga
attctagatcttggctctggagatgaaaaggtttgcaaggctgacgttaaaaagttcctg
acaccgggatattccacttcaggccatgtagaattgtacacgataagtgtagaaagagga
atgtcttgggaagatgctactaaaatttgggccgagcaaattggacctgaggatggtttt
tacttatcccagcagataagaaacaacaagaaaactgcaattttagttaaagagatcaac
ccaaaaaagaaactttttcttctgcacagacccaatactggaaagcagctgaaactagaa
acgttatcagacttgagaaagaaatacaagaaggtaccctctgatgatgcttatgctcac
tggaaagaacagtatacgtcttcagctgatacatgtacacatgcttattggagaggcaac
tgtaagaaagcaagcctaggactggtgtgtgagattggtctgcgctgccggacgtattat
gttctctgtggatctgtcctaagtgtatggactaaagtggaaggagttctagcctcagtg
agtggcaccaatgtaaaaatgcaaattgtaagattacgaactgaagatggacaaagaatt
gttggtttaatcatcccagcaaattgtttctcatcactagtaacattgctgtcaacttca
gaccaatctcagcagattgcagtacagcagcagcatatgtggcaacagcttcatcctcag
agtatcagtaatttcagcacgctgtag
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