Rana temporaria (common frog): 120935010
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Entry
120935010 CDS
T07929
Symbol
SCARB1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03272
Virion - Hepatitis viruses
rtem04145
Phagosome
rtem04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
120935010 (SCARB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120935010 (SCARB1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
120935010 (SCARB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120935010 (SCARB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtem04147
]
120935010 (SCARB1)
Membrane trafficking [BR:
rtem04131
]
Endocytosis
Phagocytosis
Scavenger receptors
120935010 (SCARB1)
Exosome [BR:
rtem04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120935010 (SCARB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
DUF4718
PorA
Motif
Other DBs
NCBI-GeneID:
120935010
NCBI-ProteinID:
XP_040203294
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All DBs
Position
1:complement(186979927..187131641)
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AA seq
507 aa
AA seq
DB search
MAGPSNKKSIILGVVGLLLVVFGAVLVFIVPVIVKQQVEKNVRIDPSSGFAYEMWRDLPV
PFFMSIYIFEVVNSKEVLLGEKPRVEERGPYVYRERKQKTNITFNDNATVSFVETRILHF
EPDMSAGSEEDFIVFPNILVLGASVMMKDLPVPLKWFISGAFTTFGQEAFINRTVKDLLW
GYNEPFLDFVNAILPGKLPFKGKFGLFAEFNNTNSGIFTVNTGVEDISQVQMVDAWNGLT
EVNFWNSEQANMINGTAGQMWPPFRTPDQPLEFYSPDACRSLTLVYDKEDSYRGIPTYRY
TAPNYLFANGSDYPPNEGFCPCTASGVMNVSACRSGAPLFLSFPHFYNADPGYVDAVDGL
HPSEELHSLFLDLHPLTGIPMNCSIKMQLSLLTMSVGGIPQTGKIKTGILPLLWFSESGY
LDGPVYNTYYNTLIVLPIVMEYLQYILIGLGLCFILVAAVLPFLNQEKVILFWNSNNKKF
DENLEINKSQTEKLTSSNGTVLMEAKL
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggccggaccctccaataagaagtctatcatcctcggggtggtcggcctgctgctagtg
gtcttcggggccgtgctggtcttcatagtccctgtcatcgtgaagcaacaagtggaaaag
aatgtccggatagatccaagcagtgggtttgcttatgaaatgtggagagatcttccagtg
cccttcttcatgtccatctacatctttgaagtagtgaactctaaggaagtccttttagga
gaaaagcccagggttgaggagcgtggaccatatgtttacagggaacgcaaacagaaaaca
aacataacttttaatgataatgcgactgtctcgtttgttgagacacggattctgcatttt
gaacctgatatgtctgcgggaagtgaagaggatttcattgtatttcccaacattcttgtc
ctgggtgcatcagtgatgatgaaagatttacctgtaccccttaaatggttcattagtgga
gcatttacaactttcggccaagaagctttcataaacagaacagtgaaggatctcttgtgg
ggctacaatgagccatttttagattttgtaaatgcaattctccctggaaaacttccattc
aaagggaaatttggcttgtttgcagagttcaataacacaaactctggtatttttacggtg
aacactggagtagaagacatcagtcaagtccaaatggttgatgcatggaatgggctcaca
gaggttaatttctggaattctgaacaagcaaatatgattaatggaactgctggtcaaatg
tggccgccttttcggacacctgatcagcctcttgagttctacagcccagatgcctgcagg
tctctgacattggtatacgataaagaagactcttacagaggtattcctacatatcggtac
actgcacccaactacttgtttgcaaatggatcggactaccctcccaatgaaggattttgc
ccatgtacagcttctggtgtaatgaacgtcagtgcctgccggtctggtgctcccttgttt
ctatcctttcctcatttctacaatgcggatcctggatatgtggatgctgtggatggacta
cacccaagtgaagagctacattccctattcctagacctgcatccacttacaggaatccct
atgaattgttcaatcaagatgcagctaagcttattaacaatgagtgttggtggaattcca
caaactgggaaaataaagactggaattcttccactcctgtggttttcagagagtgggtat
cttgatggacctgtgtataatacctactacaacacactgattgttctccctatagtcatg
gaatatctgcagtacatcctcattggcctgggactctgttttattcttgtagctgctgtt
cttccttttcttaatcaggaaaaggtcatcttattttggaatagtaataataaaaagttt
gatgaaaatcttgagatcaataaatcccaaacagaaaagttgacctcttctaatggaaca
gtgctgatggaagccaaattatag
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