Rana temporaria (common frog): 120936110
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Entry
120936110 CDS
T07929
Symbol
CLDN5
Name
(RefSeq) LOW QUALITY PROTEIN: claudin-5
KO
K06087
claudin
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03272
Virion - Hepatitis viruses
rtem04382
Cornified envelope formation
rtem04514
Cell adhesion molecule (CAM) interaction
rtem04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
120936110 (CLDN5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120936110 (CLDN5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120936110 (CLDN5)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120936110 (CLDN5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rtem03037
]
120936110 (CLDN5)
04147 Exosome [BR:
rtem04147
]
120936110 (CLDN5)
Cilium and associated proteins [BR:
rtem03037
]
Other cilia and associated proteins
Stereociliary proteins
120936110 (CLDN5)
Exosome [BR:
rtem04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
120936110 (CLDN5)
Exosomal proteins of colorectal cancer cells
120936110 (CLDN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
T4SS_CagC
MFS_MOT1
Motif
Other DBs
NCBI-GeneID:
120936110
NCBI-ProteinID:
XP_040204161
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All DBs
Position
1:207895257..207896161
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AA seq
246 aa
AA seq
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MTIIIIMGSIALEIFGMSISIIGWVGVILTCALPMWRXSAFIEQNIVVAQFIWEGLWMQC
AVQSTGQMQCKIYDSILALPRSSGWQGSHSHGINRGLVGLLVSVVGAQCTVCYQGSKVKN
RILFAGGIIYILAGLLVLIPLCWTANIVIREFYDPHVPSSKKREMGXALYVGWASTALLF
FGGVLLCXSCPMKGQFTPPVRYSASRRPPPMGTMTKELCIRTGRALTLPFLDGYPQGPHY
VYCTFS
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgactatcatcatcatcatgggttccatcgctctggagatattcggcatgtccatcagt
atcatcggctgggtcggggtgatcctgacctgtgccctccccatgtggaggntgtccgcc
ttcatagaacagaacatcgtggtggctcagttcatctgggaaggtctatggatgcaatgt
gcggtgcagagtactggtcagatgcaatgtaagatctatgactccatcctagccttgcca
aggagctccggctggcagggctctcacagtcatggcatcaatcgtgggctggtcggactt
ctggtgtccgtggttggagctcagtgcacggtctgctaccagggcagcaaggtgaagaac
cgaatattgttcgctggaggaatcatctacatcttggctggcctcctggtcctcatcccc
ctctgctggacagccaacatcgtcatccgggagttctacgacccccatgtaccatcctcc
aagaagagggaaatggggnctgccctgtacgtgggctgggcttctaccgcgctcctgttc
ttcgggggtgtgctcctctgcntctcctgcccaatgaaagggcagttcaccccacctgtc
agatactctgcctctaggagaccacctccaatggggactatgacaaaagaactatgtata
aggacaggcagggcactgacccttccatttttggatggatacccacagggtcctcattat
gtatactgcacattttcctga
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integrated database retrieval system