KEGG   Rana temporaria (common frog): 120936110
Entry
120936110         CDS       T07929                                 
Symbol
CLDN5
Name
(RefSeq) LOW QUALITY PROTEIN: claudin-5
  KO
K06087  claudin
Organism
rtem  Rana temporaria (common frog)
Pathway
rtem03272  Virion - Hepatitis viruses
rtem04382  Cornified envelope formation
rtem04514  Cell adhesion molecule (CAM) interaction
rtem04530  Tight junction
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    120936110 (CLDN5)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    120936110 (CLDN5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    120936110 (CLDN5)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    120936110 (CLDN5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rtem03037]
    120936110 (CLDN5)
   04147 Exosome [BR:rtem04147]
    120936110 (CLDN5)
Cilium and associated proteins [BR:rtem03037]
 Other cilia and associated proteins
  Stereociliary proteins
   120936110 (CLDN5)
Exosome [BR:rtem04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   120936110 (CLDN5)
  Exosomal proteins of colorectal cancer cells
   120936110 (CLDN5)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 T4SS_CagC MFS_MOT1
Other DBs
NCBI-GeneID: 120936110
NCBI-ProteinID: XP_040204161
LinkDB
Position
1:207895257..207896161
AA seq 246 aa
MTIIIIMGSIALEIFGMSISIIGWVGVILTCALPMWRXSAFIEQNIVVAQFIWEGLWMQC
AVQSTGQMQCKIYDSILALPRSSGWQGSHSHGINRGLVGLLVSVVGAQCTVCYQGSKVKN
RILFAGGIIYILAGLLVLIPLCWTANIVIREFYDPHVPSSKKREMGXALYVGWASTALLF
FGGVLLCXSCPMKGQFTPPVRYSASRRPPPMGTMTKELCIRTGRALTLPFLDGYPQGPHY
VYCTFS
NT seq 741 nt   +upstreamnt  +downstreamnt
atgactatcatcatcatcatgggttccatcgctctggagatattcggcatgtccatcagt
atcatcggctgggtcggggtgatcctgacctgtgccctccccatgtggaggntgtccgcc
ttcatagaacagaacatcgtggtggctcagttcatctgggaaggtctatggatgcaatgt
gcggtgcagagtactggtcagatgcaatgtaagatctatgactccatcctagccttgcca
aggagctccggctggcagggctctcacagtcatggcatcaatcgtgggctggtcggactt
ctggtgtccgtggttggagctcagtgcacggtctgctaccagggcagcaaggtgaagaac
cgaatattgttcgctggaggaatcatctacatcttggctggcctcctggtcctcatcccc
ctctgctggacagccaacatcgtcatccgggagttctacgacccccatgtaccatcctcc
aagaagagggaaatggggnctgccctgtacgtgggctgggcttctaccgcgctcctgttc
ttcgggggtgtgctcctctgcntctcctgcccaatgaaagggcagttcaccccacctgtc
agatactctgcctctaggagaccacctccaatggggactatgacaaaagaactatgtata
aggacaggcagggcactgacccttccatttttggatggatacccacagggtcctcattat
gtatactgcacattttcctga

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