Rana temporaria (common frog): 120936147
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Entry
120936147 CDS
T07929
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120936147
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
120936147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hira
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_HPS5
Mcl1_mid
Beta-prop_WDR19_1st
HIRA_B
WDR90_beta-prop_4th
WD40_like
Motif
Other DBs
NCBI-GeneID:
120936147
NCBI-ProteinID:
XP_040204224
LinkDB
All DBs
Position
1:208152898..208204370
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AA seq
947 aa
AA seq
DB search
MKLLKPAWVNHNGKPIFSVDIHPDGTKFATGGQGQDSGKVVIWNMPPVVKEEDEKNESVP
KMLCQMDNHLACVNCVRWSNNGAYLASGGDDKLIMVWKKSGYIGPSTVFGSSSKLANVEQ
WRCLIILRNHSGDVMDVAWSPHDAWLASCSVDNTVVIWNALKFPEIIATLRGHSGLVKGL
TWDPVGKYIASQADDHSLKVWRTMDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSA
HAMNNSGPTAQIIERDGWKTNMDFVGHRKAVTVVKFNPKIFKRKQKNGSSNKTSCPYCCC
AVGSKDRSLSVWLTCLKRPLVVIHDLFDKSIMDISWTLNGLGILVCSMDGSVAYLDFSQD
ELGDPLSEEEKNNIHQSTYGKSLAITTGSQIPNTIIENPEMLKFQQKQQILQDGEHGAAA
HRETQAPKVASMVNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGGNAPCTTP
TALAGVSTQPKLEPMKALDSRFTERSKATSGITGISHTNQAAAEKLKDQNATKESKQRDL
LESSSDSEEKIVTKSLSKRKVETDADLGEKRKKGRPRKDARLMSVSLAVQSQVATTSEKE
LTCVTTPALTLRLPTPASLKSFTVQISSDPSMYIEVENDVRVVAGSKISRLKCNREGKEW
ETVMANRILAVAGSNEVVCVACEKRMLSMFSSSGRRVFPPIIMSSPISTLQCTGYYVMAL
TAAAALSVWDVQNQVVVVKDESLQPILSGNDMTVTQTLLTQRGIPVLSLSNGKAYCFNPA
LSTWNLVSDKQDSLAQCADYRNCLTSQDAILCSGPLAIVQGRASNAGRQAARLFTMPHQV
QQETTMAYLENQIAAALILQSSQEYRYWLFIYARFLVNEGFEQKLREVCQDLLGPVHRSS
GSQWESRILGYRKRELLKELLPLIGQNLRFQRLFTEYQEQLDSLRDK
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcctgaaacccgcctgggttaaccacaatgggaagccaatcttttcagtggac
attcaccccgatggcacaaagttcgctactggaggacaagggcaagactctggaaaagtt
gtcatatggaatatgccacctgttgttaaggaggaagatgaaaagaacgaaagtgttccc
aagatgttgtgccagatggataaccacctagcttgtgtgaactgtgtgcgatggtctaac
aatggagcgtatttagcatctggaggagatgacaagcttatcatggtgtggaagaaatct
gggtatattggacccagtacggttttcggctctagtagcaaacttgcgaatgtagagcag
tggcgctgtctcatcattctcaggaatcattctggagatgtaatggatgtggcatggtct
cctcatgatgcctggttagcttcttgtagtgtggataatacggtagttatatggaatgcc
ctgaagtttccagaaattattgccacattgagagggcactcaggactggtgaagggactt
acttgggatcctgtaggaaagtacattgcttctcaagctgatgaccacagcctgaaggtc
tggcgaaccatggactggcagctagaaaccagtatcaccaaaccatttgatgagtgtgga
gggaccacccacgtcttgcgtcttagttggtcccctgatggacattacctggtctcagct
catgcaatgaacaactctgggccaacagcccagattattgagcgtgatggttggaaaacc
aacatggactttgtgggacatcgaaaagcagtcaccgttgtgaaatttaatccaaaaatc
ttcaaaaggaaacaaaagaatgggagttccaataagactagttgtccatactgctgctgt
gcagtgggtagtaaggatcgttcgctttctgtgtggcttacctgccttaagagaccattg
gtggtaatccatgatctgtttgacaaatctataatggacatctcatggacgttaaatggg
ctgggcatactggtctgttcaatggatggatcagtcgcttacttggatttttcacaagat
gagctgggtgatccactgagcgaagaggagaagaataacatccaccaaagcacttatgga
aaaagtcttgccatcacaacgggttcccagattcctaacaccatcatagagaaccctgaa
atgctgaagtttcagcagaagcagcaaatactgcaggatggagaacatggtgcagctgca
cacagggagacccaagctccaaaagtagccagtatggtaaatggagaaagcctggaagac
atcaggaagaatctcttaaagaaacaagtggaaacgcggacagcagatggtcgtcgtagg
ataaccccattgtgtatcgcccagctggacactggtggaaatgctccttgtactactcct
acagccctcgcaggtgtctcaactcagcctaagcttgaacctatgaaagcactagactcg
cgatttacagagcgatcgaaagccacgtccggcataacagggatttctcacacaaaccag
gctgctgcagagaaactgaaagatcagaatgctactaaagaatcaaagcagcgtgacctc
ttggagagcagtagcgacagcgaagaaaagattgtaaccaaatctctttccaagcgaaag
gttgaaaccgacgccgatcttggtgaaaagagaaagaagggacgacctcggaaagacgct
cggcttatgtctgtctctcttgctgtgcagtctcaagtggcaacgacttctgagaaagaa
ttaacatgtgtaactacgccagcattaacactcaggctgccaactccagcctccctgaaa
tcctttactgtacagataagctcagatccctcaatgtacatcgaagtagaaaatgacgtc
cgagtagttgctggatcaaagattagccggctcaagtgtaatcgggaaggaaaggagtgg
gagaccgtaatggctaatcgaatccttgcagtagctggcagcaacgaggtagtctgcgtg
gcctgtgaaaagcgaatgttgtccatgttttctagtagtggaagaagagtattcccacct
atcatcatgtcctcccctatttccacattgcaatgtacaggttattatgtcatggcactt
acagctgctgctgctctgtctgtctgggatgtccagaaccaggtagttgttgtaaaggat
gagtctttacaacccattttatcaggaaatgatatgacagttactcagacgttgcttacc
cagagaggtatacctgtgctgagcttgtccaatggcaaagcttattgctttaatcctgca
ctctccacatggaatttggtatccgacaagcaagattccttggcgcagtgcgcagattat
aggaactgtttgacctcgcaggatgccatattgtgctccggaccactagccatagttcaa
ggacgagcgtctaatgcaggcagacaggctgctcgtcttttcacaatgcctcatcaggta
cagcaggagaccaccatggcttacctggagaatcagattgcagctgccctcattctacag
tccagccaggagtaccgatactggctgttcatctatgcacgcttccttgttaatgaaggt
tttgagcagaagctgcgggaagtttgtcaggatcttctgggcccagtccatcgatcatct
ggcagccagtgggaatcaagaatcttgggttatcgtaaaagagagctgcttaaggaacta
ctcccacttattggacagaatcttcgatttcagcgactctttacagagtatcaagagcaa
ttggacagtttaagggacaaataa
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