Rana temporaria (common frog): 120936314
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Entry
120936314 CDS
T07929
Symbol
SMC6
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120936314 (SMC6)
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
120936314 (SMC6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
ACBP4_C
Tup_N
WEMBL
AAA_29
AAA_21
UvrA_DNA-bind
SMC_hinge
AAA_16
Motif
Other DBs
NCBI-GeneID:
120936314
NCBI-ProteinID:
XP_040204493
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All DBs
Position
4:76270181..76404336
Genome browser
AA seq
1086 aa
AA seq
DB search
MGKRKETSPLGASGHGKRARPDDDDQDSSSGEGSQAVTADVGIIESISLKNFMCHAMLGP
FRFGPNVNFVVGNNGSGKSAVLTALIVGLGGKAATTNRGSSIKGFVKDGQTSADVSITLR
NRGADAFRPEVYGDSIVVQQHLTIDGSRNYKLKSKTGTIVSSKKEELVSILDHFNIQIDN
PVSVLTQEMSKLFLQSKNESDKYKFFMKATQLEQMKEDYSYIMETKARTDNQINFGEEKL
QELKQDCIVKEDRFKNLASLGEMKEKLEDLSRNMAWAVVIEMEKQLNPVREQIAAEEGRT
VKFEQKISEWQEKVNSCDGNFRDIQGKLEMISQEAQALKPQCLALKDDVQQRKKAYNESE
VLFNRHRLELRRLERDAQQLQMRIEELQNSADNASEEEKMERLRQIDLLKHKVIELAAQD
VTTTEQMNQFQHAIYRDKEEQTNLLNQERDLKYRMDRLRRQIREFQDSRTDRLKRFGQNM
PSLLAAIDEAFRQGRFRKKPIGPLGSCIRLKDPQLDLAVESCLKSLLLAFCCDNHQDERT
LQNLMSREFPHGQRPSIIVNEFRDRVYDVSQRAAHHPNYPTVFTALEIENPVVANCLIDM
RGIETVLLIKNNSEAREVMQKRQPPRNCREAFTADGDQVFKNRYYSSDFVRSKYLSRDVD
VEIGHLEGEVQNVSSQLYTMQQRVLSLKSDIMKNETLLQQHHGTKKTIQDQLRKSNARIT
DLESVEEPSSNDISTLEIELQEDKRKIELVRFQMEETQKSMEHLKSLLVNSECQYENIKK
KISSVSELADPVKEELHKAEQEVDNCKRHRKHYEEKLRQHLQGIEKNKRELRVKESDLEG
KISQAKQIYPERIEVTQSAKSLDAEINKLRAKINSERELHGNREEIIKEYHASKEKYQEM
DSKVKNLKKFVKLLEDIMTQRYKMYQQFLRYLSLRCKFYFDSLLSQRGYSGKISFDHKNE
TLSITVQPGEVSKASLSDMRSLSGGERSFATVCFVLSLWSIAESPFRCLDEFDVYMDMVN
RRISMDMILTMADSQRFRQFILLTPQNMSSLPSSNLIRILRMQDPERGQTTLPFLPTNQQ
DEETED
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaagaaaggaaaccagcccactgggtgcctctggacacggtaaaagagcaagg
ccagatgatgatgatcaagattcttcttctggagaggggtctcaggcagtcactgctgat
gttgggatcattgaaagcatttccctgaagaactttatgtgtcatgcaatgcttggaccc
tttcgatttggaccaaatgtcaacttcgttgttgggaacaatggaagtggtaagagtgct
gttcttacagctctgattgtgggtctgggcggcaaagctgctacaaccaacagaggttca
tcaataaaaggatttgtcaaagatggacagacgtctgcggatgtatccataacattgcgt
aatcgaggcgcagatgcttttagacctgaagtgtatggagactctattgttgttcagcag
catttaactatagatggaagtcgcaattataaactaaaaagtaaaacaggaaccattgtt
tcgtcaaagaaggaagaacttgtctcaatcctagaccattttaacatacagattgacaac
ccagtgtctgttctaactcaagaaatgagtaaactgtttttgcagtcgaagaatgaatct
gacaagtacaagttttttatgaaagctacacagctggaacagatgaaggaagattattcc
tacatcatggaaacaaaggccagaacagataaccaaattaattttggtgaagagaaactg
caagagcttaagcaggattgcatagtaaaagaggatagatttaaaaatctggcatccttg
ggtgaaatgaaggagaagttagaagatctcagccgtaacatggcctgggcagtggtaatc
gagatggagaaacagctaaacccagttagggaacaaatagctgcagaagaggggcgcaca
gtgaagtttgagcagaagatcagtgaatggcaggaaaaagttaacagttgtgatggaaat
ttccgagatatacaggggaagctggaaatgatcagccaggaggctcaggcattgaaacca
cagtgcttagcattaaaagatgatgtgcagcaaaggaagaaggcctacaatgaatctgag
gtcctatttaataggcacaggctggaactaagacgtctggaaagggatgcacagcagctg
cagatgcgcattgaagagttgcagaacagcgctgataatgcttctgaagaagaaaagatg
gagagactgagacaaatagacctgctgaagcataaagtgatagaactagcagctcaagac
gtcacaactactgagcagatgaaccagttccagcatgcaatatacagggacaaagaagag
caaaccaacctgcttaatcaagagcgggatctcaaatatcggatggatagactaagaagg
caaataagggaatttcaggacagcagaacagacagactgaagagatttggccaaaatatg
ccatctcttttagcagcaattgatgaggccttcagacagggccgtttcaggaaaaaaccc
attggacctttgggttcttgcattcgtctaaaagacccacagcttgatcttgctgtggaa
agttgtctgaagtccctgctccttgctttctgctgtgataatcaccaagatgagagaact
ctgcaaaatctgatgtcaagggaattcccgcatggtcaacgtccatcaatcattgtaaat
gagttccgagaccgagtttatgatgtctcacaacgtgctgctcaccatcctaattaccca
actgtattcactgctttggagattgaaaaccctgtggttgccaactgcctgattgacatg
aggggaatcgaaacagtgctactcattaagaataatagtgaggctcgagaggtaatgcag
aagagacaaccacccagaaactgcagagaagcttttactgcggatggagaccaagtgttt
aaaaaccgctactattcatcagactttgtccgatccaaatacctgagccgagacgtggac
gtggaaatcgggcacttggaaggagaagtccaaaatgtgtcctcccaactatacacaatg
cagcaaagggttctttccttaaaaagtgatatcatgaaaaatgaaacccttctacagcag
catcatggcacaaagaaaacgatacaggaccaactcagaaaatctaatgctcgtataaca
gatctggaaagtgtagaggagccgtcatctaatgacatttcaacattggaaattgaattg
caggaagacaagagaaagattgagctggtgaggtttcagatggaggagactcagaagagc
atggaacacctaaaatctctgcttgtgaactctgagtgtcagtatgagaacataaaaaag
aaaatcagttctgtgtctgagttggcggatccagtaaaggaagaacttcataaagcagag
caagaggtagataattgtaagcgtcataggaaacattatgaggaaaagctccgccagcat
ttgcagggaatagagaaaaacaagcgtgagttgagggtcaaagaaagtgacttggagggt
aaaatctctcaagcaaagcagatttatcctgaaagaattgaagtcactcaaagtgctaaa
agtctggatgcagaaattaacaaactgagagcaaagatcaactcagagcgcgaacttcat
ggaaatcgagaagagattataaaagaataccatgcctcaaaagagaaatatcaggaaatg
gatagtaaagttaaaaatcttaagaagtttgttaaactgttggaagacataatgacacag
cgatataaaatgtaccagcaattcctcagatatctaagtttgcgatgcaagttttacttt
gactccttactttcccagcgaggctactctggaaaaatctcatttgaccacaagaatgag
acgctctctattaccgtccagcctggagaagtcagtaaggcttcattatctgacatgaga
tccctatctggaggcgaacgatcattcgcaactgtttgttttgttctttctctatggtcg
attgctgaatcgcctttccgatgtctggatgaatttgatgtatacatggacatggtgaat
agacggatatccatggacatgatacttaccatggccgattctcagaggtttcgccagttc
attcttttaaccccacagaatatgagctccctgccatccagcaatctcatccgaattctt
cgaatgcaagatcctgaacgaggacaaactacattaccttttttgccaacgaaccagcaa
gatgaggaaacagaagattaa
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