Rana temporaria (common frog): 120936321
Help
Entry
120936321 CDS
T07929
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtem03041
]
120936321 (DDX1)
03016 Transfer RNA biogenesis [BR:
rtem03016
]
120936321 (DDX1)
Enzymes [BR:
rtem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120936321 (DDX1)
Spliceosome [BR:
rtem03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120936321 (DDX1)
Transfer RNA biogenesis [BR:
rtem03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
120936321 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
120936321
NCBI-ProteinID:
XP_040204502
LinkDB
All DBs
Position
4:complement(79178522..79258062)
Genome browser
AA seq
740 aa
AA seq
DB search
MAAFGEMGVMPEIAQAVEEMDWLLPTDIQAESIPMILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDHQEGKKGKAAVKTGSSVMNKWQMNPYDRGSAFAIGSDGLCCQSREMKEWH
GCRSTRGVSKGKYYYEVSCHDQGLCRVGWSSLQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYVDIDGGRVKFSKNGKDLGNAFDIPPHLKNQALFAACVLKNAELKF
NFGDEDFKFPPKDGFVAFSKAPDGHVVKSQNAGSAQVSQAKNLPNAPKALIIEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAAKEQLATLESGVDIVVGTPGRIDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYTDFINRIHQQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKKDKLWERLGSKHIRTDGVHDKDNTRAGGI
SPEAMSEAIKILKGEYTVRAIKEHNMDQAIIFCRTKLDCDNMEQYFIQYGGGPDRKGHQF
SCVCLHSDRKPQERKQNLERFKKNEVRFLVCTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAAEKEKVWYHVCSSRGKGCYNTRLKDEGGCTIWYNEMQLLS
EIEEHLTCTITHVEQDMKVPLDEFDGKVSYGQRRATGGGLYKGHVEMLAPTVQELASLEK
EAQTSFLGLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtttggagaaatgggtgtgatgccggagattgctcaggctgtggaggagatg
gactggctccttcctactgacattcaggcggagtctataccaatgattctaggcggcggt
gatgttcttatggctgctgagactggtagtggcaagacaggggcttttagtatccctgtc
attcagattgtgtatgaaaccttgaaagatcatcaagaaggcaagaaaggaaaggccgct
gttaagactggcagctcagtgatgaataagtggcagatgaatccatatgacagaggctct
gcttttgccatcggttctgatggactttgttgtcagagcagagaaatgaaggagtggcat
ggatgtaggtcaacccgtggagtcagcaaagggaagtattactatgaagtgtcctgccat
gaccagggtttgtgtcgagttggttggtcttctcttcaggcgtccttagatcttggaacg
gacaagtttggctttgggtttggaggaacaggaaagaagtctcacaataagcagtttgat
aattatggcgaggagttcacaatgcacgataccattggttgctacgtggacatagacggt
ggtcgtgtgaagttctctaagaatggcaaagacctcggaaacgcatttgatattcccccg
cacttgaagaaccaagcattgtttgcggcatgtgttctgaagaatgctgagctgaaattt
aattttggagatgaggacttcaaattcccacctaaggacgggtttgttgctttttccaaa
gccccagatggccacgtagtcaaatcccagaacgctggaagtgcccaagtgagtcaggca
aagaatctgcctaatgcaccaaaagccctgattattgaaccctcccgggagctggcggag
cagactctgaataatgtcaagcagttcaagaaatatgtggacaatccaaagctaagggag
ctcctgattattggtggagtagcagcaaaggagcaactggcaacgctggagagtggagta
gatattgtagtgggcactccaggcagaattgatgaccttgtttcaactggaaaactgaac
ctgtcccaagtgcgcttcctggtgctcgatgaagctgatggcctcctgtctcagggatat
acagacttcatcaacagaattcatcaacaaattcctcagatcacttccgacgggaaaagg
ctgcaggtgatcgtgtgttcggccactctgcattcgttcgatgtgaagaaactgtctgag
aaaatcatgcacttccctacctgggtggatctgaaaggagaagattctgtccctgaaacc
gttcaccatgttgttgtgccagtcaacccaaagaaggataaactgtgggagcgacttggc
agcaaacatatccgaactgatggagtccacgacaaagataacactagagcaggaggaatc
tccccagaagccatgtccgaagccattaagatcctgaagggagagtacacagttcgtgcc
atcaaagaacacaacatggaccaagccatcatcttctgccgaaccaagctggactgtgac
aacatggagcaatattttatacagtatggaggaggacctgacaggaaaggacaccaattc
tcatgcgtctgtctgcacagtgacaggaagccacaggagagaaagcaaaacttggagaga
tttaagaaaaatgaagttcgattcctggtctgcacagatgtggctgccagaggtattgat
atccacggagttccttatgttatcaatgtgacccttccggatgagaagcagaactatgtc
catcgtattggaagagtcggcagagctgagagaatgggattggccatttctctggtggca
gcggaaaaagagaaggtttggtatcatgtgtgcagcagtcgtggtaaaggatgttataat
accaggctgaaggacgaaggtggctgtaccatatggtacaatgagatgcagctgctgtca
gaaattgaggagcacctgacttgcaccataacacatgtagagcaggacatgaaggtgcct
ttggatgaatttgatggaaaagtatcatatggacaacggagagctactggtggtggactc
tataaagggcatgtagaaatgttggcgcctactgtacaagagctggcttctttggagaaa
gaggctcagacctcctttttgggtctgggttatctgcccaaccagctcttcagaaccttc
tga
DBGET
integrated database retrieval system
