Rana temporaria (common frog): 120936340
Help
Entry
120936340 CDS
T07929
Name
(RefSeq) ornithine decarboxylase 1
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem00330
Arginine and proline metabolism
rtem00480
Glutathione metabolism
rtem01100
Metabolic pathways
rtem04148
Efferocytosis
Module
rtem_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
120936340
09106 Metabolism of other amino acids
00480 Glutathione metabolism
120936340
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120936340
Enzymes [BR:
rtem01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
120936340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-GeneID:
120936340
NCBI-ProteinID:
XP_040204530
LinkDB
All DBs
Position
4:85620896..85626740
Genome browser
AA seq
460 aa
AA seq
DB search
MNSFSNEDFDFSFLEEGFTARDILEQKINEVSLSDDKDAFYVADLGDIVKKHIRWFKALP
RVTPFYAVKCNDSKAIVKTLSILGAGFDCASKTEIQLVQSIGVQPERIIYANPCKQVSQI
KYAASCGVEKMTFDSEVELMKVARNHPNAKLVLRIATDDSKAVCRLSVKFGATLKTSRLL
LERAKELNVDIIGVSFHVGSGCTDPQTFVQSVSDARCVFDMGAELGFNMHLLDIGGGFPG
SEDVKLKFEEVTSVINPALDKYFPADSGVKIIAEPGRYYVASAFTLAVNIIAKKVMLSEQ
TGSDDEDDASSDKTLMYYVNDGVYGSFNCILYDHAHVKPILQKKPKPDEKLYSSSLWGPT
CDGLDRIVERCGLPELQVGDWMLFENMGAYTVAAASTFNGFQRPTLYYVMSRPHWQLMHT
IHEHGLVPDVPELNAVPVSCACESGIELNASTCTSASVNV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaacagctttagcaacgaagactttgactttagcttccttgaggaaggattcactgcc
cgggacatcctggagcagaaaatcaatgaagtttccttgtctgatgacaaggatgccttt
tatgtagctgatcttggtgacattgtaaagaaacatatccggtggtttaaagcacttccc
cgtgtaactccattttatgccgttaaatgtaatgacagcaaagccattgtgaagactctc
tccattttgggagcaggatttgattgtgccagcaagactgaaattcagcttgtccagagc
attggtgtccagccagagagaataatttatgccaacccatgcaaacaagtttcacagatc
aaatatgcagctagctgtggtgttgagaagatgacctttgatagcgaggttgaactgatg
aaggttgccaggaatcaccccaatgccaaacttgttctgcgtatagcaacagatgactcc
aaggctgtgtgtcggctaagtgtgaagtttggtgccactcttaaaacaagcagactgctt
cttgagcgtgctaaagaactgaacgttgatatcattggcgtaagcttccatgttggtagc
ggctgcacagacccacaaacctttgtgcagtctgtatctgatgctcgctgtgtctttgat
atgggagctgaacttggattcaacatgcacttacttgacattggtggcggcttccctggt
tctgaggatgttaagctgaagtttgaagaggtgacatcggtgataaatccagccctggat
aaatatttccctgctgactcgggagtaaaaattattgcagagcctgggagatactatgtg
gcatctgcattcacactggctgtcaatatcatcgctaagaaagtcatgctgtctgaacag
acgggctctgatgatgaagatgatgcttccagtgacaaaacgctcatgtactatgtaaac
gatggcgtctatggctccttcaactgcatcttgtatgaccatgcccatgtcaaacccata
cttcaaaagaaacccaagcctgatgagaaattatattctagtagcctttggggaccaacc
tgtgatggactggatcgcattgttgaacgatgtggcctaccagagctgcaggtgggggac
tggatgctgtttgagaacatgggtgcatacactgtggctgcagcttctacattcaatgga
tttcagcgaccaactctgtattatgtcatgtcaagaccacactggcaattgatgcatact
atccatgaacatggtcttgttcctgatgtcccagagctgaatgctgtccctgtatcctgt
gcctgcgaaagtggaattgagcttaatgcctccacatgtacttctgcaagtgtcaatgtc
tag
DBGET
integrated database retrieval system