Rana temporaria (common frog): 120936344
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Entry
120936344 CDS
T07929
Name
(RefSeq) ornithine decarboxylase 1-like isoform X1
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem00330
Arginine and proline metabolism
rtem00480
Glutathione metabolism
rtem01100
Metabolic pathways
rtem04148
Efferocytosis
Module
rtem_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
120936344
09106 Metabolism of other amino acids
00480 Glutathione metabolism
120936344
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120936344
Enzymes [BR:
rtem01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
120936344
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Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
120936344
NCBI-ProteinID:
XP_040204534
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All DBs
Position
4:85912827..85959912
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AA seq
449 aa
AA seq
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MNSFDFSLLEEGFTARDILEQKINEVSLSDDKDAFYVADLGDIVKKHIRWLKALPRVTPF
YAVKCNDGKAIVKTIANLGAGFDCASKAEIQLIQNIGVQPERIIYANPYKQISEIKYAAS
CGVEKMTFDSEGELMKVAKNHPNAKLVLRIATDESKTVCQLNMKFGATLKTSRLLLEHAK
ELNIDVIGVSFHVGSDSRDPQTFVQAISDARCVFDMGAEFGFNMHLLDIGGGFPGSKNSR
LNFEEVISVINLALDKYFPADSGVKIIAEPGRYYVASAFTLAVNVIAKKVMLTEQTGSHD
EDDASKKTIMYYVNDGIHSSFNLISKFRMEMCIVRKKKSKPDEKLYSSSIWGPTCDADDR
IIEQCDLPELQEGDWILFENMGAYTVVASSTFNGFQRPTLHYVMSRPHWQIMHTIQEHGT
FPEVSELSDVHVSCVAKNRMELNSIACIV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaatagctttgactttagcttgcttgaggaaggattcactgcccgggacatcctggaa
cagaaaatcaatgaagtttccttgtctgatgacaaggatgctttttatgtagctgatctt
ggtgacattgtaaagaaacatatccggtggcttaaagcacttccacgtgtaactccattt
tatgctgttaaatgtaacgacggcaaagccattgtgaagacaatagccaatttgggggca
ggatttgattgtgccagcaaggctgaaattcagcttatccagaacattggtgtccaacca
gagagaatcatttatgccaacccatataaacaaatttcagagataaaatacgcagcaagc
tgtggtgttgagaagatgacatttgatagtgaaggggaactaatgaaagtggccaagaat
caccccaatgccaaacttgtgctgcgaatagcaacagatgaatccaagactgtgtgtcag
ctcaatatgaagtttggtgccactcttaaaacaagcaggttgcttcttgagcatgctaaa
gaattgaacattgatgtaattggcgtaagcttccatgttggcagtgacagcagagatcca
caaacatttgtacaagctatatctgatgctcgctgtgtctttgatatgggagctgaattt
ggcttcaacatgcacttacttgacatcggtggcggcttccctggatccaagaattccagg
ctgaacttcgaagaggtgatatcagtgataaatctagccttggataaatatttccctgct
gactcaggtgtgaaaattattgcagagcctggaagatactatgtggcatctgcgtttaca
ctggctgtcaatgttatcgctaagaaagtcatgctgactgaacagacgggctctcatgat
gaagatgatgcgtccaaaaaaacaatcatgtactatgtaaatgatggaatccatagctcc
ttcaacttaatctcaaagtttaggatggaaatgtgcatagtcagaaaaaagaaatccaaa
ccagatgagaaactctactctagcagcatttggggtccaacttgtgatgcggatgatcgc
attatcgaacaatgtgacctaccagagctccaggagggggactggatactgtttgagaac
atgggtgcctacactgtggttgcatcttctacattcaatggatttcagcgaccaactctc
cattatgtcatgtcaagaccacactggcaaataatgcatactatccaagaacatggtact
tttcctgaggtgtcggagctgagtgatgtccatgtttcctgtgtcgcaaagaatagaatg
gagctgaattccattgcttgtattgtgtag
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