Rana temporaria (common frog): 120936461
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Entry
120936461 CDS
T07929
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120936461 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120936461 (TRIP12)
Enzymes [BR:
rtem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120936461 (TRIP12)
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
HECT type E3
120936461 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Arm
UNC45-central
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
120936461
NCBI-ProteinID:
XP_040204749
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All DBs
Position
4:113397846..113544129
Genome browser
AA seq
2083 aa
AA seq
DB search
MSSRPNNNPGGSLRRSQRNTAGAQPQEDTAGGSNRSQLEQADHKTFSLPENRKILSKAPK
VQTNTVSGQSRGYSSKRGCSSSLSISQPEDPEQNSSESHKPKKDSSRGLKRSASPEYSRT
NSTGSAKKPKALQHAEPSIGTRRPNNKPKKRQFDQEHSAPTTSLPSTSKAHNRKGGVPGS
SPLHKRKRTDNSSCVKSSSAAIVATGAEDRPPKPTKLASKSATSAKAGCSTITDSSSSAS
TSSSSSSAVASVSSAAPPGARVKQGKDQNKARRSRSASSPSPRRSSREKEQSKASSSSKF
DWAARFSPKVSLSKTKLSLPGSSKAETSKPGPSGLQAKLANLRKSTKKRSDSPPAELPSL
RRSTRQKTTGSCASTSRRGSGPTKRAAAEARRQEKMADPDNQEGANSSAARTDDTTQGAA
GATGERSSSLLSPPASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGP
RMSQLFHRTIGSGASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKNV
VPALITLLQMEHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQ
ALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSISPDEFHFVA
DSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLLVVTPP
ILSSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCLEQIDLVPRSP
QELYELTSLICELMPCLPKEGIFAVDTMLKKGSAQNTDGAIWQWRDDRGLWHPYSRIDSR
IIEAAHQVGEDEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANANTMGFPDG
VALLPGGHSELKRDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAIL
RIIYFADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVFFRR
EGVMHQVKNLAESETLLTSPPKVCTNGSGSLASAATINTGTSSAAGNAAADLGSPSLQHR
DDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDEDKADNQAKSPTATQSPKSSFLAS
LNPKTWGRLSTQSNSNNIEPARTAGVSGLARTASKDTISNNRERIRGWIKEQAHKFVERY
FSSENMDGSNPALNVLQRLCNATEQLNLQVDGGVECLVEIRSIVSESDVSSFEIQHSGFV
KQLLLYLTSKSEKDIVSRDIRLKRFLHVFFGSPLPGEEPIGRVDPTESGHLLALVHKMNN
CLSQMEQFPVKVHDFPSGNGTGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKI
DPLALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIG
DHPLPYNMTVYQAVRQYSIQTEEERESTDDESNPLGRAGIWTKTHTIWYKPVREEEESTK
DTVGGKRGRAQTAPTKTSPRNSKKHDELWHDGICPKVSNPLDNYLIPTPPENITFDDPSL
DVVILLRVLHAISRYWYYLYDNALCKEIIPTAEFINSKLTAKANRQLQDPLVIMTGNIPT
WLTELGKSCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRK
KRTVNRDELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGL
WRGEEVTLPNPKGSQDGTKYIHNMQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIM
DFRLVDIPLGLPFYKWMLRQESSLASHDLSHVDPIVAKSVYHLEEIVRQKKRLELDKSQT
KESLQFALENLNMNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLDEYVRLVIYWA
LNEGVSRQFDSFRDGFESVFPLNHLQYFYPEELDQLLCGSKSDPWDVKTLMECCRPDHGY
THDSRAVKCLFEILSSFDKEQQRLFLQFVTGSPRLPVGGFRALNPPLTIVRKTFESTENP
DDFLPSVMTCVNYLKLPDYSSIDIMREKLLIAAREGQQSFHLS
NT seq
6252 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccagccgcaagaggacactgcaggaggaagcaacaggtcccagttagagcag
gcagaccataagacctttagccttcctgagaacagaaagattctttctaaggcccccaaa
gtgcagactaatacagtttctggccagtccaggggatacagctctaaaaggggctgtagc
tcatctctttcaatatcacaaccagaggacccagaacaaaacagctcagaaagtcacaag
cctaaaaaagattcttcccgtggactaaaacgtagtgccagtcctgagtacagccggacc
aactcaactggctctgctaaaaaacccaaagcacttcagcacgctgaaccctccattggg
acgaggcgaccaaataataaaccgaagaagagacagtttgaccaggagcattcagctcca
accacatcattgccatccacaagcaaagcacacaacaggaagggtggagtccccggatca
tccccgctgcacaaaagaaaaaggacagataactcctcctgtgtgaagagcagcagtgca
gccatagtagcgactggtgccgaagacagacctcctaaacccaccaagctggcttcaaaa
tcggccacctcagccaaagctgggtgtagcaccattactgattcctcatcttctgcctcc
acctcttcttcctcctcttcagcagtcgcctctgtctcttctgctgcacctcctggagct
cgcgtaaaacaggggaaagaccagaacaaggcaaggcgttcccgttctgcctcaagtccc
agccctcgcaggagcagccgggaaaaggaacagtccaaagctagcagctcctccaagttt
gattgggcagctcgttttagcccaaaagtcagcctttccaaaacaaaactttccctcccg
ggatcttccaaggctgagacgtcaaaacctggaccctcaggattacaagcaaaattagca
aacttaaggaaatccactaagaagcgcagtgactcgccgcctgctgagctccccagtctg
cggcggagcacacgacaaaagaccacgggctcctgtgctagcaccagtcggcgaggctct
ggcccgaccaagcgagctgcagctgaagctcgccgacaggagaagatggctgatcctgat
aaccaagagggtgccaattcttcggctgcacgtacagatgataccacccagggagctgca
ggagcaacaggcgaaaggtcttcatctcttctctcccctccagcctctagctctgtagct
ggtgctgtggggatgactacatctggagaaagtgagagcgatgactctgaaatggggcgg
ctacaagcacttcttgaggcacgtggcctcccccctcatttgtttggcccccttggacct
cgcatgtctcagctcttccatcggacaattggaagtggtgcaagctccaaggctcaacaa
ctgctacagggtcttcaagccacagatgagagccagcagcttcaagcagtcattgagatg
tgccaactgctggtgatgggaaatgaagagactcttggagggttcccagtaaagaatgta
gtgcccgcactgatcactttgctgcagatggagcacaactttgacattatgaaccatgca
tgtcgagccttaacctatatgatggaggcactgccaaggtcctctgctgtggtggttgat
gcgatccctgtgttcctagagaagttgcaggtgattcagtgtatagatgtggcagaacag
gcgctcactgctctggaaatgttatcccgcaggcacagtaaagccatcctacaagctgga
ggacttgctgattgcctcctgtatctagagttcttcagcatcaatgctcagaggaatgct
ttagccatagcagccaactgctgccagagcatcagtccagatgagttccactttgttgct
gactctttgccactgctcacacagcgattgacccatcaggataagaaatctgtggaaagc
acttgcctatgttttgctcgtctggtagataacttccagcatgaagagaatctgctccaa
caagtggcttccagagatctgctcaccaacatccagcagcttctagtggtaacacctccg
atcctgagctcgggcatgttcatcatggtggtccgaatgttctctttgatgtgttccaac
tgccccacgctggccgtgcagcttatgaagcagaatatagcagaaactctgcacttcctt
ttatgcggggcctcaaatggtagttgcctggagcaaattgacctggtcccccgcagcccc
caggagctgtatgaacttacctccctcatatgtgagttgatgccatgcttaccgaaggaa
ggaatatttgcagttgacacaatgttaaagaaaggaagtgcccaaaatacagatggagcg
atttggcagtggagggatgaccgcggtctctggcacccatacagccgaattgatagtcgc
atcattgaggcagcccatcaggttggtgaggatgagataagtttgtctacactggggcgt
gtttatactattgattttaattctatgcagcaaatcaacgaggataccggaacagcacgc
gccattcagagaaaacctaaccccctagccaatgcaaacactatgggctttcctgacgga
gtagctttgcttccaggtggacattctgagctaaaaagagatgacgccagagcgcagctg
atgaaagaagacccagagctggccaaatcttttattaagaccttgtttggagtgctttat
gaagtgtacagctcctctgcggggcctgctgtcagacacaagtgccttagagcaatcctt
aggatcatttattttgctgatgctgaactcctaaaagatgttttaaagaaccatgctgtg
tccagtcatattgcttctatgttgtcaagccaagacctcaaaattgtggttggagctctt
cagatggcagagatattaatgcagaaattgccagacatattcagtgtgtttttcaggaga
gaaggtgtgatgcaccaagtgaagaatttggctgaatctgagacgctgttaacaagccct
ccaaaggtctgcaccaatggctctggctctctagccagtgccgcaaccatcaatactgga
actagcagtgcagctgggaatgcagctgctgaccttggttcacccagcctccagcaccga
gatgactcgctagacctcagcccacaagggcgacttagtgacgtcttaaaaagaaaaaga
ctgcctaaacgtgggccaaggaggcccaagtactcccctcctcgagatgaagataaagct
gacaatcaagcaaaaagcccaacagccacacagtctccaaaatcctcatttttggccagc
ttaaaccctaaaacctggggcaggttgagcacacagtcaaatagcaacaatattgagcca
gcgagaacagccggtgtaagcgggttggcaaggacggcttccaaagacaccatctcaaat
aacagagagagaatacgtggctggataaaggagcaggcgcataagtttgtggaaagatat
tttagttctgagaatatggatggcagcaaccctgcacttaatgtactacagagactttgc
aacgccacagaacagctcaatcttcaggtggatggtggtgttgagtgccttgtagaaatc
cgtagcatagtctccgagtctgatgtttcctcatttgaaatccagcacagtgggtttgtg
aaacagctactcttgtatctgacatccaaaagtgaaaaggatattgtaagcagagatatc
cggctgaagaggttccttcacgtcttttttggttccccacttcctggagaagaaccaatt
ggaagagtagatccaacagaaagtggccatttgcttgcactagtgcacaagatgaacaac
tgcctcagtcagatggagcaattcccagtcaaagtgcatgattttcccagtggaaatggg
acagggagcagggggtcgcaggctctgaagtttttcaatacacatcagctgaagtgtcag
cttcagagacatcctgactgtaccaatgtaaagcaatggaaaggtggacctgtaaaaatt
gaccctctggctcttgtgcaagcaattgaaagatatcttgtggtcagaggctatggcaga
gtgagggaagatgatgaggacagtgatgacgatggctcagatgaagagatcgatgagtcc
ttggcggctcagttcttaaattcaggaaatgtaaggcacagactccagttttatattgga
gatcacccactgccttacaacatgactgtttaccaagctgtgagacagtatagcattcag
actgaagaggagagggaatcgacagatgatgaaagtaatccattaggaagagctggcatc
tggaccaagacgcacaccatttggtacaaaccagtaagggaggaggaagagagcacaaaa
gacaccgtagggggcaaaaggggtcgtgcccaaactgcaccaaccaaaacatcccctagg
aattcaaagaaacatgatgaattgtggcatgatggaatttgtccaaaagtgtctaaccct
ttagataattacctcatacctacccctcctgaaaatatcacctttgatgacccatccctt
gatgtggtgatccttctgcgagttctacatgccattagccgatactggtattatttgtat
gataatgcactttgtaaagagataatccccacagccgagtttatcaatagtaaactgact
gcaaaagcgaacaggcagcttcaggatccgctggtcatcatgacgggaaacattcccacc
tggttaacagagctggggaaaagttgtccgtttttctttccattcgatacgaggcaaatg
ttgttctacgtgactgcatttgacagagatcgggcaatgcagaggctgctggacaccaac
cctgagataaaccaatcggattctcaggatagcagagtggccccaagactggacagaaaa
aaacgcactgtgaatagagatgagctcctgaagcaggcagaatctgttatgcaagatttg
ggtagctcacgagccatgctggagattcagtatgagaatgaagttgggactggactggga
cccactttggagttttatgcacttgtatctcaggaattacaaagagctgacctcggccta
tggagaggagaagaggttacacttcctaatcctaaaggaagccaagacgggaccaagtac
attcacaacatgcagggtctgtttgctcttccctttggtcggacagctaagccagcacat
atcgccaaggtgaaaatgaagttccggtttcttggcaaattaatggctaaagccatcatg
gacttcagactggtggacattcctcttggactcccattctataagtggatgttacggcag
gaatcttcattggcctcccatgatttgtcacacgtggatccaattgtggcaaaatctgtt
taccacctggaagaaatagtgagacaaaagaagagactggaactagacaagtcacagacc
aaagagagtctgcagtttgcactagaaaatttgaacatgaatggctgctctgtggaagat
ctgggactggattttacactgccaggctttcccaatattgaactgaagaaaggaggaaaa
gacatacctgttacaattcacaacctggatgagtatgtacggctcgttatttattgggca
ctgaatgaaggagtttccagacagtttgactcgttcagagatggttttgaatcagtcttc
ccacttaaccacctgcagtatttttacccagaggagttggatcagctgttatgtggaagc
aagtctgatccttgggatgttaaaactctgatggagtgctgtaggccagaccatggatat
acacacgacagtcgagctgtgaaatgcctgtttgaaattctcagtagttttgataaggag
caacagaggttatttctgcagtttgtcacagggagtccaagactgccagttggaggcttc
cgggccttgaaccctcctctcaccatagtccgcaagaccttcgaatctaccgaaaaccct
gacgatttcctgccctctgttatgacctgcgtcaactaccttaagttgccagactattct
agcattgatattatgcgcgagaaactgttaatcgctgcacgtgaagggcaacagtcattc
cacctttcctga
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integrated database retrieval system
