KEGG   Rana temporaria (common frog): 120936481
Entry
120936481         CDS       T07929                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
rtem  Rana temporaria (common frog)
Pathway
rtem03020  RNA polymerase
rtem03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120936481 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    120936481 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rtem03021]
    120936481 (POLR2D)
   03400 DNA repair and recombination proteins [BR:rtem03400]
    120936481 (POLR2D)
Transcription machinery [BR:rtem03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     120936481 (POLR2D)
DNA repair and recombination proteins [BR:rtem03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      120936481 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 BIG2_C Tfb4 Maelstrom
Other DBs
NCBI-GeneID: 120936481
NCBI-ProteinID: XP_040204791
LinkDB
Position
4:complement(115747026..115767273)
AA seq 167 aa
MRFPGRRLYCILLPFPLDCTHGKSSMATGGVEVRSADVEEDASQLLFPKEFESAETLLNS
EVHMLLEHRKQQNESAEEEQELSEVFMKTLNYTARFSRFKNRETIASVRSLLLQKKLHRF
ELACLANLCPETADEAKALIPSLEGRFEDEELQQILDDIQTKRSFQY
NT seq 504 nt   +upstreamnt  +downstreamnt
atgcgctttccgggaagacggctctattgtatactacttccgtttcctttggactgtaca
cacgggaaatccagtatggcgaccggtggagtggaagttcgttcagctgatgtggaggag
gacgcatcccagttactgttccccaaagagttcgaaagtgcagaaacactgctgaattca
gaagtgcacatgttgttggagcatcggaaacaacaaaatgagagcgcagaagaggaacaa
gagttgtccgaagtatttatgaaaactcttaactacacagcaaggtttagtcggttcaag
aatagagaaaccattgccagtgtcagaagcttgctgttacagaaaaagctgcacagattt
gagttggcctgtttagccaacttgtgtccagaaacagcagatgaggcaaaagcactgatt
cccagtcttgaaggacgatttgaagatgaggagttacagcagatcttggatgatattcag
acaaagagaagcttccagtactaa

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