Rana temporaria (common frog): 120936677
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Entry
120936677 CDS
T07929
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120936677 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120936677 (DHX36)
03012 Translation factors [BR:
rtem03012
]
120936677 (DHX36)
Enzymes [BR:
rtem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120936677 (DHX36)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
120936677 (DHX36)
Translation factors [BR:
rtem03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
120936677 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
Sigma54_activat
PhoH
ABC_tran
Motif
Other DBs
NCBI-GeneID:
120936677
NCBI-ProteinID:
XP_040205147
LinkDB
All DBs
Position
4:complement(152364029..152448805)
Genome browser
AA seq
1004 aa
AA seq
DB search
MSYEQRRGWGRGRGRGGRGRDRDRDDSFHRDGESSGGGRERPPPHLRGREIGLWYARRQG
PKNKEKEKEKERMDRAVVHMDESRELQITRLLSTVQAQNNDVKPTLSEDSWWATENERNS
TPPQLGENAFTEKDAWDDDDEDDDVTDTEYASVSECYRGNTALDQQLKEELQRKKNNFTY
AEMQRFREKLPSYAMREEIVKVINANQVTVISGETGCGKTTQVTQFILDDHIMRGKGSMC
HIVCTQPRRISAISVADRVAAERGELCGRGNSTGYQIRLESQLPRKQGSILYCTTGIVLQ
WLQSDQRLGEVSHVVLDEIHERNLHSDVLMAIVKDLLICRPDLKVILMSATLNAEKFSQY
YGNCPMLHIPGFTFPVKEYLLEDVIEMLRYSPKDKDRKPQWKNRFMQGRMVQPEKVEKEK
LYQERWPRYLRDLQVKYSESTIHSLECADDEKVDIDLISELIRHIVLKGEDGAILVFLPG
WDNISTLHDLLMSQIMFKSDRFIIIPLHSLMPTVNQTQVFKTPPRGVRKIVIATNIAETS
ITIDDVVHVIDCGKIKETNYDTQNNISTLTAEWVSHANAKQRKGRAGRVKPGCCYHLYNS
LRDSLLDDYQLPEIARTPLEELCLQIKIVKLGGIGFFLRKLLDPPSQQAVSLAINHLMEL
NALDKREELTPLGFHLARLPVEPHIGKMILFGALFGCLDPVLTIAASLSFKDPFLIPLGK
EKLADARRKELSKNTKSDHLTVLNAFMGWEEAKRYGPKAEKDYCWDNFLSSNSLKMLNDM
KGQFADHLVGAGFVSSSNPKHSKSNINSDNEKLIKAVICAGLYPKVAKIRPTFSKKRQMV
KVYTKSDGKVCIHPKSVNVEETEFHYSWLVYHLKMKTSSIYLYDCTEVSPYSLLFFGGDI
SIQKDQGQDTIAVDEWIVFQSPGRIAHLVKDLKTELDSLLQEKIENPRPVDWSETESRDC
AFLSAIIDLITTQENGEAKNFAPRLQPKKSWSCAANFQYYQASN
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgaacagcgccgaggatggggacggggtcgaggacgaggtggccgtggtcgg
gaccgagaccgagatgactcattccaccgtgacggagaaagtagcgggggtgggagagag
agaccacctcctcacctgaggggccgggagatcggcttgtggtatgcccggagacagggg
cctaagaacaaggagaaggagaaagagaaggagaggatggatagagctgttgtgcacatg
gatgaatccagagaactacagatcacacgtcttctaagcactgtgcaggcgcaaaataat
gatgtgaagccaactctctctgaagactcatggtgggccactgaaaatgaaagaaacagt
accccacctcaacttggagagaatgcattcacagaaaaagatgcttgggatgatgatgat
gaagatgatgatgttactgatactgaatatgcatctgttagtgagtgctataggggaaat
acagccttggatcaacaacttaaagaagagctgcagaggaaaaaaaacaatttcacatat
gctgaaatgcagcggttccgtgaaaagttgccttcatacgctatgagagaggagatcgtt
aaagtaataaacgccaatcaggtgacagtcattagtggtgagactgggtgtggaaaaact
acccaagtgacacagtttattttggatgaccatatcatgagaggcaaagggtctatgtgc
cacattgtctgcactcaaccaaggagaataagtgccatatcggtagcggaccgtgttgct
gcagaacgaggggaactgtgtgggaggggaaatagcactggttaccaaatccgtcttgaa
agtcagttgcctcggaagcagggttcaatcttgtactgtacgactggcatagttctgcag
tggcttcagtctgaccaacgcttgggcgaagtcagtcacgttgtcctagatgaaattcat
gagagaaacctgcattctgatgtcctcatggcaatagtgaaagatcttctaatctgccgc
ccagatttgaaggtcatactgatgagtgccactctcaatgcagagaagttttctcagtac
tatggtaactgtccaatgctgcatattcctggatttactttcccggtcaaagagtatctc
ttggaggatgtaattgaaatgctaaggtattcccctaaagacaaagatcgtaagccacag
tggaagaataggtttatgcaaggacgtatggttcaaccagagaaggtggaaaaggagaag
ctgtatcaggaacgctggccaagatatttgcgggatcttcaagtaaagtactctgaaagt
actattcattctttggaatgtgcggatgacgagaaggttgatatcgatctgatttctgag
cttatcaggcacatagtcttgaaaggggaggatggtgcaatattggtgttccttccaggc
tgggacaatatcagcacacttcatgatttgctgatgtcacaaatcatgtttaaatcagac
cggtttattattatccctctgcattcattaatgccaactgtgaaccaaacacaggttttc
aaaactccacctcgtggggtacgaaagattgttattgccaccaacattgcagagacaagc
atcacaatagacgacgttgtgcatgtaatagattgtggcaaaataaaagaaacaaactac
gacactcaaaataacatcagcactttgacagcagaatgggttagccatgctaatgcaaag
cagagaaaaggacgtgctggcagagtaaagccaggttgctgctatcatctatacaacagc
ctgagggatagtcttctagatgattatcagctgccagaaattgcaagaacacctctagag
gaactttgcctgcagataaagattgtaaagcttggcggcattggcttcttccttagaaaa
ctgttggacccaccatcgcaacaggcagtgagcctggctataaaccatcttatggaactg
aatgctctcgataaacgtgaagaattgacacccctggggtttcacttggcgcggttacca
gtagaaccacatatcggaaagatgattctctttggggcattgtttggttgtttggatcct
gtcttaacaattgcagcaagcctcagctttaaagacccatttcttattccattgggtaag
gaaaaattggcagatgcaagaagaaaggaactgtccaaaaatacgaagagtgaccacttg
actgttctgaatgctttcatgggttgggaggaagctaagcgatatggaccaaaagcagag
aaggactactgctgggataacttcctgtcttctaattcactcaagatgctaaatgacatg
aaagggcagtttgcggaccacctggttggagcaggttttgtcagcagcagtaatccaaag
cattctaaatctaatatcaattcagataatgaaaagctcatcaaggcggttatctgtgct
ggattgtatccaaaagtggctaagattcgccctaccttcagtaaaaaaagacaaatggta
aaagtttacacaaaatcagatggtaaggtctgcattcatcccaaatcggtcaacgtggaa
gagacagagtttcactactcctggctggtctaccacctgaagatgaaaaccagtagtatt
tacctgtatgactgcacagaggtctctccatattcactacttttctttggaggagatatt
tccatccagaaggaccaagggcaggacactattgctgtcgatgaatggattgtttttcag
tcgcctggtcggattgcacacctggtcaaggatttgaagacagagcttgattcccttttg
caagagaagatagaaaatcctcgacctgtagactggagtgaaacggaatcaagagactgt
gcttttctttcagccattattgatctaataactacccaagagaatggggaggccaagaat
tttgcccctcgactgcagccgaagaaatcgtggtcttgtgcagccaattttcagtactat
caagcaagcaactag
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