Rana temporaria (common frog): 120936791
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Entry
120936791 CDS
T07929
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120936791 (SOX2)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120936791 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
120936791
NCBI-ProteinID:
XP_040205370
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All DBs
Position
4:180995651..180996845
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AA seq
311 aa
AA seq
DB search
MYNMMETELKPAAPQQPSGGGNSNQSAANQKNSPDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDK
YTLPGGLLAPGGNSLGSGVGGSLGAGVNQRMDSYAHMNGWTNGGYGMMQEQLGYPQHPGL
NAHNAAQMQPMHRYDVSALQYNSMSSSQSYMNGSPTYSMSYSQQGGPGMTLASMGSVVKS
ESSSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPENSAQSRLHMSQHYQSASVPGT
TINGTLPLSHM
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagaccgagctgaaacccgccgccccccagcaaccttccggcggg
ggcaactccaaccagtcggccgccaaccagaaaaacagcccggaccgggtgaagagaccc
atgaacgccttcatggtatggtccagagggcagaggaggaagatggcccaggagaaccct
aagatgcataactctgagatcagtaagaggctaggggctgaatggaagcttctctctgag
gccgagaagagacccttcattgatgaggccaagaggctccgagccctccacatgaaggaa
cacccggattataaataccggcccaggaggaaaaccaaaaccctcatgaagaaggataag
tacaccctaccagggggattgctagctcctgggggcaactccctgggctcaggggtcggg
ggcagcctaggagccggggtcaaccagaggatggacagctatgcccacatgaacggctgg
accaacggcggctacggcatgatgcaagagcagctcggttacccccaacacccagggctc
aatgcccacaacgccgctcagatgcaacccatgcaccgctacgacgtcagcgccctccaa
tacaactccatgagtagttctcagtcctacatgaacggttcacctacctacagcatgtcc
tactcccaacaagggggccccgggatgaccctggcttccatgggctccgtggtcaagtct
gaatccagctccagcccgcccgtggtcacctcgtcctcccactccagggctccttgtcaa
gcgggggacctccgggacatgatcagcatgtacctacctggggcagaagtgccagagaac
tctgcccaaagcagactgcacatgtcccagcactatcagagcgcctccgtaccgggcaca
accatcaatggcacgcttcctctatcacacatgtga
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