Rana temporaria (common frog): 120936800
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Entry
120936800 CDS
T07929
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03030
DNA replication
rtem03410
Base excision repair
rtem03420
Nucleotide excision repair
rtem03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120936800 (RFC4)
03410 Base excision repair
120936800 (RFC4)
03420 Nucleotide excision repair
120936800 (RFC4)
03430 Mismatch repair
120936800 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtem03032
]
120936800 (RFC4)
03036 Chromosome and associated proteins [BR:
rtem03036
]
120936800 (RFC4)
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120936800 (RFC4)
DNA replication proteins [BR:
rtem03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120936800 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
120936800 (RFC4)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
120936800 (RFC4)
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120936800 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
120936800 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_11
AAA_16
AAA_22
AAA_30
DUF815
Mg_chelatase
AAA_24
RuvB_N
ResIII
SLFN-g3_helicase
AAA_5
AAA_28
AAA_14
AAA_19
Gp44_lid
TIP49_C
AAA_7
AAA_3
Motif
Other DBs
NCBI-GeneID:
120936800
NCBI-ProteinID:
XP_040205388
LinkDB
All DBs
Position
4:183164491..183210404
Genome browser
AA seq
363 aa
AA seq
DB search
MQAFLKGGTSISTKPLKEKTSATSSGNTSDGKKPKPVPWVEKYRPKCVDDVAYQEEVVAV
LKKSLQGADLPNLLFYGPPGTGKTSTILAAARELYGPELFRQRVLELNASDERGIQVVRE
KVKNFSQLTVGGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICN
YVSRIIEPLTSRCSKFRFKPLADKIQTKRILDICTKENVLITNEAVSRLVEVSEGDLRKA
ITFLQSATRLTAGKEITDVVITEIAGVISKETLDSVLAACQSGLFEKLETVVLNLINNGH
AATQLVNQLHDLILEREDLTDKQKAAIAEKLGEVDKCLVDGADEYLQMLSLFAVVMQQMT
QNN
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttctaaaaggaggtacatctataagcaccaagcccctcaaagagaaaact
tctgcaaccagttctggaaataccagcgatgggaagaaacctaaacctgtcccatgggtg
gaaaaataccgacccaaatgtgtggatgacgttgcctaccaagaagaagttgtggctgtc
ctcaaaaagtcgcttcaaggagcagatctgcctaatcttctattctatgggccacccgga
actggaaaaacatccacaattttggcagcggccagggagttatatgggcctgaattgttt
cggcagcgtgtgctcgagttaaatgcttctgatgaaagaggaatacaagtagttcgggag
aaagtgaaaaatttctctcagctcacagttggtggcagccgttccgatgggaagccttgc
cccccatttaagattgttattctggatgaagcggactcgatgacatcagcagcacaggct
gcgctgcgacgcaccatggagaaagagtctaaaacaactcgattctgcctcatttgcaat
tatgtcagcagaataattgagcctttaacctctcgatgctccaagtttcgttttaaacca
cttgctgataaaatacaaacaaaaagaattctggatatctgcacaaaagaaaatgtgctt
attacaaatgaggcagtatcccgtctggttgaagtatcagaaggtgacttgagaaaagcc
atcacttttctgcaaagtgctacaaggcttactgcaggaaaagaaattacagatgttgtg
ataacagaaattgcaggggtgatctctaaagagacacttgattcagtgctggctgcttgt
cagagtggattatttgagaaactagaaactgtggttttgaatctgataaataatggccac
gcagcaacacagcttgtaaaccaactccatgatctcatccttgaacgagaggacctcacc
gataaacagaaagcggctattgcagagaaacttggtgaagttgacaaatgtttggtggat
ggagcagatgaatacctgcaaatgctcagtctttttgcagttgttatgcaacagatgacc
caaaacaactaa
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