Rana temporaria (common frog): 120936858
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Entry
120936858 CDS
T07929
Symbol
CLDN1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03272
Virion - Hepatitis viruses
rtem04382
Cornified envelope formation
rtem04514
Cell adhesion molecule (CAM) interaction
rtem04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
120936858 (CLDN1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120936858 (CLDN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120936858 (CLDN1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120936858 (CLDN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rtem03037
]
120936858 (CLDN1)
04147 Exosome [BR:
rtem04147
]
120936858 (CLDN1)
Cilium and associated proteins [BR:
rtem03037
]
Other cilia and associated proteins
Stereociliary proteins
120936858 (CLDN1)
Exosome [BR:
rtem04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
120936858 (CLDN1)
Exosomal proteins of colorectal cancer cells
120936858 (CLDN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
L_HMGIC_fpl
TctB
DUF4064
DUF1218
DUF6336
Motif
Other DBs
NCBI-GeneID:
120936858
NCBI-ProteinID:
XP_040205507
LinkDB
All DBs
Position
4:193134801..193155404
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AA seq
213 aa
AA seq
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MANSGLQLLGFALACIGWIGFIVSVAIPQWKMSSFAGDAIITAQITYEGLWMSCVMQSTG
QMQCKSYDSLLKLNSTMQATRALMICGILLGFFAACIAAVGMKCLTCLQDDEVKKARVGI
VGGILFIIAGLCVLIATAWYGNQIARDFYNAFTPTNSKYEFGPALFIGWAGAAMAILGGA
LLCCSCPKRETSYPPPRGYHKNAPSAPAGKDYV
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggccaattcaggcttacaacttttaggatttgccttggcttgtataggatggattggc
tttatagtgtccgtagctattccccaatggaagatgtcttcgtttgccggagatgccatc
atcacagcacagatcacctatgaaggcttgtggatgtcctgtgtcatgcagagtacaggg
cagatgcagtgcaaatcctacgactctcttctgaaattaaacagcactatgcaggctacc
cgggcattgatgatctgtggaattcttttgggcttctttgcagcttgtattgctgcagtg
ggaatgaaatgcttaacctgccttcaagatgatgaggtgaagaaagccagggttggaatc
gttggtggtattcttttcattattgctgggctatgtgttcttattgcaacagcatggtat
ggaaaccaaattgccagggatttctacaatgcatttaccccaaccaactccaaatatgaa
tttgggccagctttatttattggctgggctggtgctgcaatggcaatcttaggaggggcc
ttgctttgctgctcatgtcctaaaagggaaacttcttatccaccacctagaggctaccac
aaaaatgcaccttcagcacctgcaggaaaagactatgtgtaa
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