Rana temporaria (common frog): 120937025
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Entry
120937025 CDS
T07929
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120937025 (RIMS1)
Membrane trafficking [BR:
rtem04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
120937025 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
120937025 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
PDZ_6
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
120937025
NCBI-ProteinID:
XP_040205859
LinkDB
All DBs
Position
4:226681073..227173350
Genome browser
AA seq
1536 aa
AA seq
DB search
MSSSMGPRGPRPPIVPPPMPDLPDLSHLTEDERNTIMAVMNRQKEEEEKEEAMLKRLHQQ
FESYKEQIKKIGEDPRRYPGDHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRV
SLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFFGSGTQQPASQDGTLSDTGTGADSPREK
KARLQERSRSQTPLSTAATAGSQDASTPSLQSDSSKGSEPSLLSAVQDQKTSSRSRSEPP
RDRKKTVAVSEQNGKVLKGERKRAQKLNQQGLAYPDEHKERRETRKLGKGRSQDIPEKLE
EGTNLEDDQQRLDDDYQTRYRSDPNLARYPVKPQPEEQQMRIHAKVSKARHERRHSDASL
PHAELEEAEIPENKLGKNSQVPVKQDKRTVLESHQSYSIDRNGDEPISKSKQVSNHSPPS
PRHSPVPPENVESKNHDSFKKQSRLDPSSALLMRKANREKMETMSRNDSLSSDQSESVRP
SPPKPHRSKRGGKRRQMSVSSSEEEGASTPEYTSCEDVEIESESVSEKGDLDYYWLDPAT
WHTRDTSPLGSHPVTWQPSKEGDRLIGRVILNKRTSMPKESGALLGLKVVGGKMTETGRL
GAFITKVKKGSLADVVGHLRAGDEVLEWSGKPLPGATNEDVYNIILQSKSEPQVEIIVSR
PIGDIPRIPESSHPPLESSSSSFESQKMDRPSISVISPTSPGALKDAPQVLPGQLSVKLL
YDKVEHHLIVTVLQAIDLPPRPDGRPRNPYVKMYFLPDRSDKSKRRTKTVKRSSEPKWNQ
TFVYSHVHRKNFRERMLEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWYKLQTHD
ESSLPLPQPSPFMPRRHVHVENSSKKLQRSQRIIDSDFSDFDVDDGIGVVPPGSRSNARQ
SRSTTLTVPEQQRVTHHRSRSVSPHRVDEQGRTRSRLPNVPLQRSLDEIHQMRRSRSPTR
HHDASRSPVTHRSRDSDSQYLSDQDSELLMLPRAKRGRSAECLHTIRNTVRHSKTLPPKM
PLLEFGSNWRLYSELQPSLDRARSASTNCLRPDTSLHSPERERQPRKLERSSNQKQNRKN
MVSEVERNHQLGSQSSTGDSSFSRRGRQLPQVPVRSNSVEQEPERYSSSSTANLLVEERA
RQIKLKVQRYKQTAGSSSSQELEREQYSKYNMHKDQYRSCDNVSAKSSDSDVSDVSAISR
TSSASRLSSTSFMSEQSERPSRRLWMQGRRMGSSGRTITKSTSVSGEIYQLEHNDGSQSD
TAVGTVGLCGKKRRPSFSAKVAALVSRRSRSTSQLSQTDSSNKKFKSTIQRSTETGMAAE
MRSRMVRQPSRESTDGSINSYSSEGNLIFPGVRLGVDSQFSDFLDGLGPAQLVGRQTLAT
PAMGDIQIGMVDKKGQLEVEVIRARGLTQKPGSKSTPAPYVKVYLLENGACVAKKKTRIA
RKTLDPLYQQNLVFEDNPHGKVLQVIVWGDYGRMDHKSFMGVAQILLEELDLSSVVIGWY
KLFPPSSLVDPTLTPLTRRASQSSLESSTGPPSIRS
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcaatggggcccagaggccctcggccacccatagtgcctccccccatgccc
gatctccccgatctgagccatctgacagaggacgagaggaacactatcatggcagtgatg
aaccgacagaaggaggaggaggagaaggaagaggccatgctaaagaggctacatcagcaa
tttgaaagctacaaagaacaaataaaaaaaataggggaggacccacgtcggtatcctggg
gatcacaaggatgatgctccaacatgtggaatctgccacaaaacaaagtttgcagatggc
tgcggacatttatgctcttactgccgaacaaaattctgtgcccgatgtggaggtcgtgtt
tcgcttcggtcaaacaatgaggacaaagtggttatgtgggtttgcaatctgtgccgaaaa
caacaagaaatccttactaaatcaggtgcatggttttttggaagtgggacacagcagcca
gcaagccaagatggaacactaagtgatactggtactggtgctgattcaccaagagaaaag
aaagcaagacttcaagagagatctagatctcaaactcctttaagtactgctgcaaccgct
ggttcccaagacgcctcaacacctagtttacaatctgatagtagcaaaggttccgaacca
tcactactatctgcagttcaagatcagaagacttcatcaaggtcgagaagtgaaccacca
cgagacaggaagaagactgtagcagtttcagaacagaatggaaaagtattaaaaggggag
cgcaagagagcccagaagttaaatcaacaaggtctggcatatcctgatgaacataaagaa
aggagagagactagaaaattgggaaaggggagatcccaggacattccagaaaaactagag
gaaggaacaaacttagaagatgatcagcaaagactggatgatgattatcaaactcggtat
aggagtgaccctaacttagctagatatcctgtaaaaccacagccagaggagcaacaaatg
cgtatacatgctaaagtttcaaaggcacggcatgagaggaggcacagcgatgcttcccta
ccccatgcagagctggaagaagcagaaattcctgagaacaaactagggaaaaactcacaa
gtacctgtaaaacaggataaaagaacagttctggaaagtcatcagtcatattcaattgat
agaaatggtgacgaacccatttctaaatccaaacaagtgtccaatcacagccctccaagt
cccagacacagccctgtacccccagagaacgtagaatcgaaaaaccacgactcatttaaa
aaacaaagtcggttagatcccagctcagcgcttttaatgagaaaagcaaaccgtgaaaaa
atggagacaatgtcaaggaatgattcacttagttcagatcagtctgaatctgtaaggcca
tccccaccaaagccccatcgatctaagagaggtggaaagaggagacaaatgtctgtgagt
agttcagaagaagaaggggcatcaacacctgaatatacaagctgtgaagatgtggaaata
gaaagtgaaagtgtcagtgaaaaaggtgatttggattattactggttggaccctgccaca
tggcacactagagacacatctccccttggctcgcatcctgtaacctggcagccttcaaag
gagggtgatcgtttaattggacgtgttattcttaataagagaacaagtatgccgaaggaa
tcaggagcacttctgggactgaaagttgttggaggtaaaatgactgaaacaggacgcctt
ggtgcctttatcaccaaagtcaagaagggaagccttgcagatgtcgtaggccatttaaga
gcaggtgacgaggttttagaatggagcgggaagcctttaccaggtgcaacaaatgaagat
gtttacaatatcattttacaatcaaaatctgagccacaagtcgagatcattgtgtcccgt
cccattggagacattccaaggatcccagaaagctctcacccgccattagaatctagttca
agttcttttgaatctcagaagatggacaggccttcaatatctgttatatctccaaccagc
cccggagcacttaaagatgcacctcaggtcttgccagggcagctgtctgtaaaattgttg
tatgataaagtagaacatcatctaatagtcactgtgttacaagcaatagaccttccaccc
aggccagatggacgcccaagaaatccctatgtaaaaatgtatttccttccggacagaagc
gataaaagtaaaaggaggaccaaaacagtgaagaggagctcagaaccaaaatggaaccaa
acatttgtttactcccatgtgcatcgtaaaaattttagagaaagaatgttagaaattacc
gtgtgggatcagcctagagtacaagaagaggaaagcgaatttcttggcgagattctcata
gagctagagactgcactattagacgatgaacctcactggtataaactgcaaacacatgat
gagtcttcactacctctgcctcagccatcaccttttatgccaaggagacatgtacatgtg
gagaattctagcaaaaaattacaaagatctcagcgaatcattgatagtgacttctcagat
tttgatgttgatgatggtattggagttgtgcctccaggttcaaggtctaatgctagacaa
agcagatccacaacgttaacagtgccagaacaacaaagagtgacccatcaccgctcacgt
tccgtatctcctcaccgtgttgatgaacagggcaggacccgctcacgtttaccaaatgtg
ccattacagaggagtctggatgaaattcatcaaatgagacgatcacgttctccaacaaga
caccatgatgcctcccgcagtccagttactcacaggtccagggactcggacagtcagtat
ttatctgatcaagatagtgagcttcttatgctgcccagagcaaaacgtggccgaagtgct
gaatgcctacatactatcagaaatactgttaggcacagtaaaactttgccacccaagatg
cctttactagagtttggttctaattggagattatacagtgaactacagccctcccttgac
agggctcgaagtgctagtaccaactgtttgaggccagatactagtttgcattcaccagaa
cgagaaaggcagcccagaaaattggaaagatctagcaaccaaaaacagaatagaaaaaac
atggtttctgaagtagaaagaaaccatcaactaggaagccagtcatccacaggtgattct
tcattcagtcgaagaggaaggcagcttccacaggtccctgtaagaagcaacagtgtagaa
caagaaccagagcgttatagttcatcttcaacagcaaatttattagtggaagaacgggca
agacaaatcaaattaaaggttcagcggtataagcaaacagctgggtctagttctagccaa
gaattagagcgagagcaatattctaagtataacatgcataaagatcaatacagaagttgt
gacaacgtctcagccaaatcatcagatagtgatgtcagtgacgtgtcagccatttcccgt
accagtagtgcctcccgcctcagcagcacaagctttatgtctgagcaatctgagcgtcca
agcagaaggctttggatgcaaggcagacggatgggatcttcagggagaaccataactaag
agcacaagtgtaagtggagaaatctaccagttggagcacaatgatggaagccagtctgat
acagcagtgggaacggttgggttatgtgggaagaaacgaagaccaagttttagtgccaaa
gtagctgcactagtatcaagaagaagtaggagcacatcacagcttagccaaacagattcc
agcaacaagaaattcaaaagtacaatacagagaagcacagaaacaggaatggcagctgaa
atgaggagtcgtatggtccggcagccaagcagagagtcaacagatggaagtattaacagc
tacagctctgaaggaaatttaatatttccaggagtaaggctaggtgttgacagccagttt
agtgactttctggatggacttggacctgcacagctagtaggccgacaaacgctggcaact
cctgctatgggtgacatacaaattggcatggtagataagaaaggacagctagaggttgaa
gtaataagggcacgaggtctaacacaaaagcctggttcaaaatccacaccagctccatat
gtcaaggtgtaccttttagaaaatggagcatgtgtagccaagaagaagaccagaattgca
cgaaaaacccttgatcccctttatcaacagaacttggtttttgaagataatccccatgga
aaggtgcttcaggtaattgtttggggagactatggtcgaatggatcacaaatccttcatg
ggtgttgcacagattctcctggaagagcttgatctgtccagcgtggtcattggatggtat
aagttgtttccaccttcgtcattagtggatccaacactgacacccctaactcgcagggct
tcccagtcatctcttgaaagttcaacagggcctccttccattaggtcttaa
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integrated database retrieval system
