Rana temporaria (common frog): 120937035
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Entry
120937035 CDS
T07929
Name
(RefSeq) elongation factor 1-alpha, somatic form
KO
K03231
elongation factor 1-alpha
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120937035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120937035
03016 Transfer RNA biogenesis [BR:
rtem03016
]
120937035
03012 Translation factors [BR:
rtem03012
]
120937035
04131 Membrane trafficking [BR:
rtem04131
]
120937035
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtem04147
]
120937035
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120937035
Transfer RNA biogenesis [BR:
rtem03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
120937035
Translation factors [BR:
rtem03012
]
Eukaryotic type
Elongation factors
120937035
Membrane trafficking [BR:
rtem04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
120937035
Exosome [BR:
rtem04147
]
Exosomal proteins
Proteins found in most exosomes
120937035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
120937035
NCBI-ProteinID:
XP_040205890
LinkDB
All DBs
Position
4:complement(228839656..228847409)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEPSSNMPWFKGWAISRKEGKGSGTTLLEALDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVVTFAPVNVTTEVKSVEMHHEALT
EACPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPLEAGQFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDLPKSLKSGDAAIVDMVPGKPMCVESFSDYPP
LGRFAVRDMRQTVAVGVIKAVEKKAAGTGKVTKSAQKAQKTK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagactcacatcaacatcgtggtcattggacacgtagattcgggcaag
tccacaacaactggacatctcatctacaaatgtggtgggatcgacaagcgtaccatcgaa
aaattcgagaaggaagctgctgagatgggaaaaggctccttcaaatatgcttgggtgttg
gacaaactgaaggctgagcgtgaacgtggtattaccatcgacatttccttgtggaaattt
gagaccagcaagtactatgttaccatcattgatgcccctggccacagagactttatcaag
aacatgatcactggtacttctcaggctgactgcgctgtgctcattgttgctgctggtgtt
ggtgagtttgaggctggtatctcaaagaatggacaaactcgtgaacatgctcttctggcc
tacactctgggtgtgaagcagcttatcgttggtgttaacaaaatggattccactgagcca
ccatacagccaaaagagatacgaggaaattgtaaaggaagttagcacttacatcaagaaa
attggttacaatccagatactgttgcctttgtgcccatttctggttggaatggtgacaac
atgctggaacccagtagcaacatgccatggttcaagggatgggccatctcccgcaaagag
ggaaaaggcagtggaaccactctgctggaagctcttgatagcattctgcctcctagccgc
cccactgacaagcctcttcgtctgcctctgcaggatgtgtacaagattggtggtattggt
acagtaccagttggtcgtgttgaaactggtctcctgaaaccaggtatggtggttaccttt
gctccagtcaatgtaacaactgaagtcaagtctgtggaaatgcaccatgaagctttgacc
gaggcttgtcccggtgacaacgttggtttcaatgtaaagaacgtttctgtgaaggatatc
cgtcgtggtaacgttgctggtgatagcaagaacgacccaccattggaagctggtcaattt
actgcacaggtcattatcctgaaccacccaggacagatcagtgctggctatgcacctgtg
ctggattgccatactgctcacattgcctgcaagtttgcagagctgaaggagaagatcgac
cgtcgttctggtaagaaactggaagaccttcccaagtccctgaaatctggtgatgctgcc
atcgttgatatggtccctggcaagcccatgtgtgtggagagcttctctgactatcctccc
cttggtcgcttcgctgtgcgtgacatgaggcagactgttgctgttggtgtcatcaaggct
gtcgaaaagaaggcagcaggtactggcaaggtcacaaagtctgctcagaaggcccagaaa
acgaaatga
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