KEGG   Rana temporaria (common frog): 120937056
Entry
120937056         CDS       T07929                                 
Name
(RefSeq) PH-interacting protein
  KO
K11797  PH-interacting protein
Organism
rtem  Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rtem04121]
    120937056
Ubiquitin system [BR:rtem04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     120937056
SSDB
Motif
Pfam: WD40 Bromodomain WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_SPT8 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_DCAF12 WbmS-like Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 120937056
NCBI-ProteinID: XP_040205929
LinkDB
Position
4:complement(233536016..233730949)
AA seq 1879 aa
MSSSSNELKSELFYLVARFLEDGPCQEAAQVLIREVEKKELLPKRVDWTGKEHPRTYQNL
VKYYRHLAPDHLLQICQRVGPLLEKEIPQSVPGVLTLLGAGRQSLLRTNKSCKHVLWKGS
GLAALHCGRPPELPVSYGNSPSIGNTLFARKLNGKYKFETLVPTAVYQHMKMHKRILGHL
SSVYCVTFDRTGRRIFTGSDDCLVKIWSTDDGHLLATLRGHAAEISDMAVNYENTMIAAG
SCDKMIRIWCLRTCAPLAILQGHSASITSLQFSPLCSGSKRFLSSTGADGTICFWLWDAG
TLKINPRPIKYTERPRPGVQMICSSFSSGGMFLATGSTDHMIRVYYFGSGQPEKISELEF
HTDKVDSIQFSNGSSRFVSGSRDGTARIWQYKKKEWKSILLDMATRPTGAQGVEDKTTKL
KVTMVAWDRHDNSVITAVSNMTLKVWNSYTGQLIHILMGHEDEVFVLESHPFDPRVLFSA
GHDGNVIVWDLVRGVKIRSYFNMIEGQGHGAVFDCKCSPDGQHFACTDSHGHLLIFGFGS
SSKYDKIADQMFFHSDYRPLIRDANNYVLDEQTQQAPHLMPPPFLVDVDGNPHPQRFQRL
VPGRENCRDEQLIPQMGVTASGLNQVLSQQANDEVSPLDSLIQRLQREQDQRINPGTGNT
NSRMARASIGSNPEVHSPPNIGLRRSGQIEGVRQMHSNAPRSEMATERDLVAWSRRVVVP
ELSPGVASKQEEWRTAKGQEEIHLYKAEEKKKTVPSHSVRENKVATSSKNHTAELLLDPG
DSGKQLSGQHNYRTRAALEEPAGTTEDLENENSSSDEADAESEAIAASGVTSDDEEKTGW
NSDGSSSSDCSSDYSDWTADAGINLQPPKKTPKVKKKKAESSSEDEGAEKFKQKQSKKER
KKGTEEKDGPSASPKKKKPKERKQKRLAVAALTEEGLNLEEWLPSVWITDTVPRRCPFVP
QMGDEVYYFRQGHEAYVEMAKKNKIYRINAKKQPWHKMELREQELMKIVGIKYEVGLPTL
CCLKLAFLDSDTGKLTGGAFTMKYHDMPDVIDFLVLRQQFDEARRRHWSIGDRFRSVIDD
AWWFGTIESQEPLQSQYPDSLFQCYNVCWDNGDTEKMSPWDMELIPNNACQSLNVVCTSF
TGDPATVFPEELGTSVPLTEIEVRSLLYRTLDGEWGCRSRDDECERIIDGINQLMTLDIA
SAFLAPVDLQAYPMYSMVVAYPTDLSTIKQRLENRFYRRLSSLMWEVRYIEHNTRTFNEP
GSPIVKSAKFVTDILLAFIKDQSCYDIIPQYNIMKKLLLSDSEEEEEKDADLPGTSTRKS
KEYRPRRTLRSRAQSYDIQSWKKQCQELLNLIFQCEDSEPFRHPVDVHEYSDYRDIIDTP
MDFGTVKEKLEAGTYKSPTEMYKDVRLIFSNSKAYTPSKRSKIYSMSLRLSAFFEERAGA
ILTDYRSAIKFHQRSTIPKRKKKRNRSDSSSSSAASSPERKRKYAKHQPKQENAAMPSGL
PNPRSAVQKVPTAQTNGKGAESSPLARTRSYRRSIEPVSADKPSTSSPKPMTTRLNNAAG
KTVAIDENSIKHRNQSTPSSTSQPMTTTQLKKNTVPKENLEKEKPLKRKIKGMNSQPQAE
RNEGAVPVSVQVNGHSSQVKKPGVRGRPPGRKPKMVNNNASNSDPNNSVQVVPKKRGRKP
KFPRNDDRQQIVPQVTPHTKQVRPVPPVKKEKELPTSSSCNSHAELKVKNENEVPKKRRG
RKPKIRIDHTEIDAAPSPPPSPPPSPPPPPPSPPPQSLPTQTVPENVEQELVKIQTRSKC
KKVEEPMDVSRETTEGLDDSESQMRTRNQGRRTAFYNEDDSEEEQRQLLFEDTSLTFGTS
SRGRVRKLTEKAKANLIGW
NT seq 5640 nt   +upstreamnt  +downstreamnt
atgtcctcctcaagcaacgagctgaaatccgagctcttttacctcgttgccagatttctg
gaagatggaccgtgccaggaggcagctcaggtcttgatcagagaagtggagaagaaggag
ctgctgcccaagagggtggactggacgggcaaggagcacccccggacctaccagaatttg
gtaaaatattaccgacatttagcaccagaccatttattgcaaatatgccagagggtagga
ccacttctcgagaaagaaattcctcaaagtgtacctggtgtgctaacactactaggagct
ggacgccagtctctgctgcgcacaaacaaaagctgcaaacatgttttatggaaaggctca
ggccttgctgcattacactgtggacgacccccagagctgcctgtcagttacggaaactca
ccaagtataggaaatacactttttgcaagaaagctaaatggaaagtacaaatttgagaca
ctagtcccaacagccgtttatcagcatatgaagatgcacaagaggattttgggacatctc
tcctctgtttactgtgtaacttttgatcggactggccgaaggatatttacaggctctgat
gactgcctggtaaaaatatggtcaacagatgatggccacctcctggcaacattaaggggg
catgctgctgaaatctccgacatggctgtgaattatgaaaatacaatgattgctgctgga
agctgtgacaagatgatcagaatctggtgcttgaggacatgtgccccactggccatttta
cagggtcacagcgcttccataacttctctacagttctcgccactgtgcagtggatctaag
cgattcctctcctctactggagctgatggaacaatttgcttctggctttgggatgcagga
actctaaaaataaatccccgtcccataaagtacacagagagaccacgaccgggggttcaa
atgatctgctcctctttcagttctggagggatgtttctagctacagggagcactgaccac
atgataagagtttattattttggctccggtcaaccagaaaagatttctgaattagagttt
cacacagataaagtggatagcatccagttttcaaatggtagtagtcggtttgtaagtggg
agtcgtgatgggactgctcgcatttggcagtacaagaaaaaggagtggaagagcatttta
ttagacatggctactcgacctactggcgcacaaggtgtagaagacaagacaacaaaactt
aaagttaccatggtggcttgggaccgtcatgataattccgtgatcactgcagtcagcaac
atgactttaaaagtttggaactcatacactggacaactcatccatatccttatggggcat
gaagatgaagtttttgtactcgaatcccatccctttgatccaagagtgttgttttctgca
ggtcatgatggcaatgtcatagtatgggatctagtccgaggagttaaaattcgttcttac
tttaacatgattgaaggacaagggcacggagccgtgtttgactgtaaatgttctccagac
ggtcagcactttgcttgcacagactcgcatggtcatctgctgatttttggctttggttct
agtagcaaatacgacaagatcgcagatcaaatgttctttcacagtgattatcgacctctt
attcgtgatgccaacaattatgttctggatgaacaaacgcaacaagcaccccacctgatg
ccaccaccattcttggtagatgttgatggcaatcctcatccacaacgattccagcgttta
gtacctggccgtgaaaactgcagggatgaacaacttattcctcaaatgggagttactgcc
tcagggctgaaccaagtactcagccagcaagcaaatgatgaagtcagtcctttggacagt
cttattcagaggcttcagcgggaacaagaccagaggataaatccagggactgggaacacc
aacagtcgcatggcgagagcttcaatcggctccaatccagaagttcattcccccccaaat
attggcttaagacgcagcggtcagattgaaggtgttcgacaaatgcatagcaatgctccc
cgcagtgagatggcaactgaaagggatctagtggcctggagtcggagagtggtagttcct
gaactctcccctggagtagccagtaaacaggaagaatggcgaacagcaaaaggtcaagaa
gaaatacatctctataaagcagaagagaaaaagaaaactgtacccagtcatagtgtgaga
gaaaataaagtagccacttcttcaaagaatcacactgctgaactgttacttgatcctggg
gattcaggaaagcagctatctggccaacacaattatcgcactagagctgccctggaagag
ccagcagggacaacagaagacctggagaatgaaaacagctcctcagatgaggcagatgcg
gaaagtgaagcaatagctgcaagtggtgtaacatcagatgacgaggaaaaaacgggttgg
aacagtgatggtagcagttcaagtgattgctcaagtgattactcagactggactgctgat
gctggaatcaatctgcaaccaccaaagaaaacgcctaaagtaaaaaaaaaaaaagcagaa
agcagctctgaagatgaaggggctgaaaagtttaaacagaagcagagtaaaaaagaaaga
aagaagggtactgaagaaaaagatggcccatctgcatcgccaaagaaaaagaagccaaaa
gaaaggaagcagaagcgtttagcagttgcagcccttacagaggaaggcttgaaccttgaa
gagtggctgccatctgtgtggattactgacactgttccaaggagatgcccttttgtgcct
cagatgggtgatgaggtatactattttcgccaagggcatgaggcatatgttgaaatggcc
aaaaagaataaaatttatcggataaatgccaagaaacaaccctggcataaaatggagttg
agggagcaagaactcatgaagatagttggaattaaatatgaagtgggtttgccgaccctc
tgttgtcttaaacttgcttttcttgactctgatactggcaaattgactggaggagcattc
acaatgaagtatcatgacatgccagatgtaatagactttttagtacttcgacagcagttt
gatgaagcaagacgtagacattggagcattggcgacagatttcggtcagtgattgatgat
gcctggtggtttggcactatagaaagtcaggagccactgcagtcacagtatccagacagt
ttattccagtgctacaatgtctgttgggacaatggtgatacagagaagatgagcccttgg
gatatggaactcatacccaacaatgcttgccaatccctaaatgtggtctgcactagtttt
accggtgatccagccactgtttttcctgaggagttgggcaccagtgtaccgttgacagaa
attgaggtacggtcgttgctctacaggaccttggatggagagtgggggtgtagaagccga
gatgacgaatgtgagagaatcattgatggcatcaatcagctgatgactctagacattgct
tctgcctttctggctcctgtagacctccaagcctacccaatgtacagcatggttgtggca
tacccaactgaccttagtaccatcaaacagcgactggaaaacaggttctacaggcgtctg
tcttcgctaatgtgggaagtacgatatatagagcacaacactcgaacttttaatgaacct
ggaagtccaattgtaaaatcagccaagtttgtcacagatattttactggcatttataaaa
gaccagagttgctatgatatcattccacagtacaacatcatgaagaagctgctattgtca
gactctgaagaggaagaagaaaaagatgcagatttacctgggacatccactaggaagagc
aaggaatatcggccaaggagaacactgcgtagccgagcccagtcttatgatatacagtct
tggaagaagcaatgccaggagctgttaaatctaatttttcagtgtgaagactctgaacct
ttcaggcaccctgttgacgtccatgaatattcagattatagagacattatagacacacct
atggattttggaacagtaaaagaaaaacttgaggctgggacttacaaatctcctacggaa
atgtacaaggacgtgaggctaattttcagtaattcaaaggcttatacaccaagcaaaaga
tcaaagatctatagcatgagtttgcgtttatctgcgttctttgaagagcgtgccggcgcc
attttaacagattatcgctctgccatcaaatttcatcagaggagcacgatacccaaacgc
aagaagaaaaggaatcggagcgactcttccagcagcagtgcagcatctagtcctgaaaga
aaaagaaaatatgcgaagcaccagccaaagcaggaaaacgcagcaatgccttcaggactg
cccaacccacgttcagcagttcaaaaggtgccaactgctcaaacaaatggcaagggagca
gaatccagtccattggcccgcacaaggagttacaggcgttcgatagagccagtttctgct
gataaaccatctacttcttcacctaaacccatgacaacaagattgaataatgctgcagga
aaaacagtagcaatagatgaaaactcaattaaacatagaaatcaaagtactccaagcagt
accagccagccaatgacaaccacccagcttaaaaagaacactgtgcccaaagaaaacctg
gaaaaggagaagcctctgaaacgcaaaattaaagggatgaacagtcaaccacaagctgaa
agaaatgaaggtgcagtgccagtaagtgttcaagttaatggacacagcagccaggtcaag
aagccaggtgtgagaggtcgcccccctggccgcaaaccgaagatggttaacaacaacgct
agtaacagtgacccaaataatagcgttcaagtggttccaaagaaaagggggcggaagcca
aaatttcccaggaacgatgatcggcaacaaattgtaccccaggtcacacctcataccaaa
caggtcaggcctgttcccccagttaaaaaggaaaaggaactgccgacttcatccagctgt
aactctcatgcagagctgaaagttaagaatgagaatgaggtaccaaaaaagcggaggggt
agaaaaccaaaaataagaattgatcatacagagattgatgctgctccttcccctcctcct
tctccccctccttctcctcctcctcctcctccttctccacctccacagtcattaccaaca
cagacagtgccagaaaatgtggaacaggaacttgttaaaatacagacaagaagtaaatgt
aaaaaggttgaggaacctatggatgtatccagagagactactgaaggccttgatgattct
gaatcccaaatgagaactagaaatcagggcaggagaactgcattttataatgaagatgac
tctgaggaggaacaaaggcagctgctgtttgaggacacttctttgactttcggaacctca
agcagaggaagagtacggaaattaacagagaaggctaaagccaatttaataggctggtga

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