Rana temporaria (common frog): 120937056
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Entry
120937056 CDS
T07929
Name
(RefSeq) PH-interacting protein
KO
K11797
PH-interacting protein
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120937056
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120937056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Bromodomain
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SPT8
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_DCAF12
WbmS-like
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
120937056
NCBI-ProteinID:
XP_040205929
LinkDB
All DBs
Position
4:complement(233536016..233730949)
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AA seq
1879 aa
AA seq
DB search
MSSSSNELKSELFYLVARFLEDGPCQEAAQVLIREVEKKELLPKRVDWTGKEHPRTYQNL
VKYYRHLAPDHLLQICQRVGPLLEKEIPQSVPGVLTLLGAGRQSLLRTNKSCKHVLWKGS
GLAALHCGRPPELPVSYGNSPSIGNTLFARKLNGKYKFETLVPTAVYQHMKMHKRILGHL
SSVYCVTFDRTGRRIFTGSDDCLVKIWSTDDGHLLATLRGHAAEISDMAVNYENTMIAAG
SCDKMIRIWCLRTCAPLAILQGHSASITSLQFSPLCSGSKRFLSSTGADGTICFWLWDAG
TLKINPRPIKYTERPRPGVQMICSSFSSGGMFLATGSTDHMIRVYYFGSGQPEKISELEF
HTDKVDSIQFSNGSSRFVSGSRDGTARIWQYKKKEWKSILLDMATRPTGAQGVEDKTTKL
KVTMVAWDRHDNSVITAVSNMTLKVWNSYTGQLIHILMGHEDEVFVLESHPFDPRVLFSA
GHDGNVIVWDLVRGVKIRSYFNMIEGQGHGAVFDCKCSPDGQHFACTDSHGHLLIFGFGS
SSKYDKIADQMFFHSDYRPLIRDANNYVLDEQTQQAPHLMPPPFLVDVDGNPHPQRFQRL
VPGRENCRDEQLIPQMGVTASGLNQVLSQQANDEVSPLDSLIQRLQREQDQRINPGTGNT
NSRMARASIGSNPEVHSPPNIGLRRSGQIEGVRQMHSNAPRSEMATERDLVAWSRRVVVP
ELSPGVASKQEEWRTAKGQEEIHLYKAEEKKKTVPSHSVRENKVATSSKNHTAELLLDPG
DSGKQLSGQHNYRTRAALEEPAGTTEDLENENSSSDEADAESEAIAASGVTSDDEEKTGW
NSDGSSSSDCSSDYSDWTADAGINLQPPKKTPKVKKKKAESSSEDEGAEKFKQKQSKKER
KKGTEEKDGPSASPKKKKPKERKQKRLAVAALTEEGLNLEEWLPSVWITDTVPRRCPFVP
QMGDEVYYFRQGHEAYVEMAKKNKIYRINAKKQPWHKMELREQELMKIVGIKYEVGLPTL
CCLKLAFLDSDTGKLTGGAFTMKYHDMPDVIDFLVLRQQFDEARRRHWSIGDRFRSVIDD
AWWFGTIESQEPLQSQYPDSLFQCYNVCWDNGDTEKMSPWDMELIPNNACQSLNVVCTSF
TGDPATVFPEELGTSVPLTEIEVRSLLYRTLDGEWGCRSRDDECERIIDGINQLMTLDIA
SAFLAPVDLQAYPMYSMVVAYPTDLSTIKQRLENRFYRRLSSLMWEVRYIEHNTRTFNEP
GSPIVKSAKFVTDILLAFIKDQSCYDIIPQYNIMKKLLLSDSEEEEEKDADLPGTSTRKS
KEYRPRRTLRSRAQSYDIQSWKKQCQELLNLIFQCEDSEPFRHPVDVHEYSDYRDIIDTP
MDFGTVKEKLEAGTYKSPTEMYKDVRLIFSNSKAYTPSKRSKIYSMSLRLSAFFEERAGA
ILTDYRSAIKFHQRSTIPKRKKKRNRSDSSSSSAASSPERKRKYAKHQPKQENAAMPSGL
PNPRSAVQKVPTAQTNGKGAESSPLARTRSYRRSIEPVSADKPSTSSPKPMTTRLNNAAG
KTVAIDENSIKHRNQSTPSSTSQPMTTTQLKKNTVPKENLEKEKPLKRKIKGMNSQPQAE
RNEGAVPVSVQVNGHSSQVKKPGVRGRPPGRKPKMVNNNASNSDPNNSVQVVPKKRGRKP
KFPRNDDRQQIVPQVTPHTKQVRPVPPVKKEKELPTSSSCNSHAELKVKNENEVPKKRRG
RKPKIRIDHTEIDAAPSPPPSPPPSPPPPPPSPPPQSLPTQTVPENVEQELVKIQTRSKC
KKVEEPMDVSRETTEGLDDSESQMRTRNQGRRTAFYNEDDSEEEQRQLLFEDTSLTFGTS
SRGRVRKLTEKAKANLIGW
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctcaagcaacgagctgaaatccgagctcttttacctcgttgccagatttctg
gaagatggaccgtgccaggaggcagctcaggtcttgatcagagaagtggagaagaaggag
ctgctgcccaagagggtggactggacgggcaaggagcacccccggacctaccagaatttg
gtaaaatattaccgacatttagcaccagaccatttattgcaaatatgccagagggtagga
ccacttctcgagaaagaaattcctcaaagtgtacctggtgtgctaacactactaggagct
ggacgccagtctctgctgcgcacaaacaaaagctgcaaacatgttttatggaaaggctca
ggccttgctgcattacactgtggacgacccccagagctgcctgtcagttacggaaactca
ccaagtataggaaatacactttttgcaagaaagctaaatggaaagtacaaatttgagaca
ctagtcccaacagccgtttatcagcatatgaagatgcacaagaggattttgggacatctc
tcctctgtttactgtgtaacttttgatcggactggccgaaggatatttacaggctctgat
gactgcctggtaaaaatatggtcaacagatgatggccacctcctggcaacattaaggggg
catgctgctgaaatctccgacatggctgtgaattatgaaaatacaatgattgctgctgga
agctgtgacaagatgatcagaatctggtgcttgaggacatgtgccccactggccatttta
cagggtcacagcgcttccataacttctctacagttctcgccactgtgcagtggatctaag
cgattcctctcctctactggagctgatggaacaatttgcttctggctttgggatgcagga
actctaaaaataaatccccgtcccataaagtacacagagagaccacgaccgggggttcaa
atgatctgctcctctttcagttctggagggatgtttctagctacagggagcactgaccac
atgataagagtttattattttggctccggtcaaccagaaaagatttctgaattagagttt
cacacagataaagtggatagcatccagttttcaaatggtagtagtcggtttgtaagtggg
agtcgtgatgggactgctcgcatttggcagtacaagaaaaaggagtggaagagcatttta
ttagacatggctactcgacctactggcgcacaaggtgtagaagacaagacaacaaaactt
aaagttaccatggtggcttgggaccgtcatgataattccgtgatcactgcagtcagcaac
atgactttaaaagtttggaactcatacactggacaactcatccatatccttatggggcat
gaagatgaagtttttgtactcgaatcccatccctttgatccaagagtgttgttttctgca
ggtcatgatggcaatgtcatagtatgggatctagtccgaggagttaaaattcgttcttac
tttaacatgattgaaggacaagggcacggagccgtgtttgactgtaaatgttctccagac
ggtcagcactttgcttgcacagactcgcatggtcatctgctgatttttggctttggttct
agtagcaaatacgacaagatcgcagatcaaatgttctttcacagtgattatcgacctctt
attcgtgatgccaacaattatgttctggatgaacaaacgcaacaagcaccccacctgatg
ccaccaccattcttggtagatgttgatggcaatcctcatccacaacgattccagcgttta
gtacctggccgtgaaaactgcagggatgaacaacttattcctcaaatgggagttactgcc
tcagggctgaaccaagtactcagccagcaagcaaatgatgaagtcagtcctttggacagt
cttattcagaggcttcagcgggaacaagaccagaggataaatccagggactgggaacacc
aacagtcgcatggcgagagcttcaatcggctccaatccagaagttcattcccccccaaat
attggcttaagacgcagcggtcagattgaaggtgttcgacaaatgcatagcaatgctccc
cgcagtgagatggcaactgaaagggatctagtggcctggagtcggagagtggtagttcct
gaactctcccctggagtagccagtaaacaggaagaatggcgaacagcaaaaggtcaagaa
gaaatacatctctataaagcagaagagaaaaagaaaactgtacccagtcatagtgtgaga
gaaaataaagtagccacttcttcaaagaatcacactgctgaactgttacttgatcctggg
gattcaggaaagcagctatctggccaacacaattatcgcactagagctgccctggaagag
ccagcagggacaacagaagacctggagaatgaaaacagctcctcagatgaggcagatgcg
gaaagtgaagcaatagctgcaagtggtgtaacatcagatgacgaggaaaaaacgggttgg
aacagtgatggtagcagttcaagtgattgctcaagtgattactcagactggactgctgat
gctggaatcaatctgcaaccaccaaagaaaacgcctaaagtaaaaaaaaaaaaagcagaa
agcagctctgaagatgaaggggctgaaaagtttaaacagaagcagagtaaaaaagaaaga
aagaagggtactgaagaaaaagatggcccatctgcatcgccaaagaaaaagaagccaaaa
gaaaggaagcagaagcgtttagcagttgcagcccttacagaggaaggcttgaaccttgaa
gagtggctgccatctgtgtggattactgacactgttccaaggagatgcccttttgtgcct
cagatgggtgatgaggtatactattttcgccaagggcatgaggcatatgttgaaatggcc
aaaaagaataaaatttatcggataaatgccaagaaacaaccctggcataaaatggagttg
agggagcaagaactcatgaagatagttggaattaaatatgaagtgggtttgccgaccctc
tgttgtcttaaacttgcttttcttgactctgatactggcaaattgactggaggagcattc
acaatgaagtatcatgacatgccagatgtaatagactttttagtacttcgacagcagttt
gatgaagcaagacgtagacattggagcattggcgacagatttcggtcagtgattgatgat
gcctggtggtttggcactatagaaagtcaggagccactgcagtcacagtatccagacagt
ttattccagtgctacaatgtctgttgggacaatggtgatacagagaagatgagcccttgg
gatatggaactcatacccaacaatgcttgccaatccctaaatgtggtctgcactagtttt
accggtgatccagccactgtttttcctgaggagttgggcaccagtgtaccgttgacagaa
attgaggtacggtcgttgctctacaggaccttggatggagagtgggggtgtagaagccga
gatgacgaatgtgagagaatcattgatggcatcaatcagctgatgactctagacattgct
tctgcctttctggctcctgtagacctccaagcctacccaatgtacagcatggttgtggca
tacccaactgaccttagtaccatcaaacagcgactggaaaacaggttctacaggcgtctg
tcttcgctaatgtgggaagtacgatatatagagcacaacactcgaacttttaatgaacct
ggaagtccaattgtaaaatcagccaagtttgtcacagatattttactggcatttataaaa
gaccagagttgctatgatatcattccacagtacaacatcatgaagaagctgctattgtca
gactctgaagaggaagaagaaaaagatgcagatttacctgggacatccactaggaagagc
aaggaatatcggccaaggagaacactgcgtagccgagcccagtcttatgatatacagtct
tggaagaagcaatgccaggagctgttaaatctaatttttcagtgtgaagactctgaacct
ttcaggcaccctgttgacgtccatgaatattcagattatagagacattatagacacacct
atggattttggaacagtaaaagaaaaacttgaggctgggacttacaaatctcctacggaa
atgtacaaggacgtgaggctaattttcagtaattcaaaggcttatacaccaagcaaaaga
tcaaagatctatagcatgagtttgcgtttatctgcgttctttgaagagcgtgccggcgcc
attttaacagattatcgctctgccatcaaatttcatcagaggagcacgatacccaaacgc
aagaagaaaaggaatcggagcgactcttccagcagcagtgcagcatctagtcctgaaaga
aaaagaaaatatgcgaagcaccagccaaagcaggaaaacgcagcaatgccttcaggactg
cccaacccacgttcagcagttcaaaaggtgccaactgctcaaacaaatggcaagggagca
gaatccagtccattggcccgcacaaggagttacaggcgttcgatagagccagtttctgct
gataaaccatctacttcttcacctaaacccatgacaacaagattgaataatgctgcagga
aaaacagtagcaatagatgaaaactcaattaaacatagaaatcaaagtactccaagcagt
accagccagccaatgacaaccacccagcttaaaaagaacactgtgcccaaagaaaacctg
gaaaaggagaagcctctgaaacgcaaaattaaagggatgaacagtcaaccacaagctgaa
agaaatgaaggtgcagtgccagtaagtgttcaagttaatggacacagcagccaggtcaag
aagccaggtgtgagaggtcgcccccctggccgcaaaccgaagatggttaacaacaacgct
agtaacagtgacccaaataatagcgttcaagtggttccaaagaaaagggggcggaagcca
aaatttcccaggaacgatgatcggcaacaaattgtaccccaggtcacacctcataccaaa
caggtcaggcctgttcccccagttaaaaaggaaaaggaactgccgacttcatccagctgt
aactctcatgcagagctgaaagttaagaatgagaatgaggtaccaaaaaagcggaggggt
agaaaaccaaaaataagaattgatcatacagagattgatgctgctccttcccctcctcct
tctccccctccttctcctcctcctcctcctccttctccacctccacagtcattaccaaca
cagacagtgccagaaaatgtggaacaggaacttgttaaaatacagacaagaagtaaatgt
aaaaaggttgaggaacctatggatgtatccagagagactactgaaggccttgatgattct
gaatcccaaatgagaactagaaatcagggcaggagaactgcattttataatgaagatgac
tctgaggaggaacaaaggcagctgctgtttgaggacacttctttgactttcggaacctca
agcagaggaagagtacggaaattaacagagaaggctaaagccaatttaataggctggtga
DBGET
integrated database retrieval system