KEGG   Rana temporaria (common frog): 120937226
Entry
120937226         CDS       T07929                                 
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
rtem  Rana temporaria (common frog)
Pathway
rtem03082  ATP-dependent chromatin remodeling
rtem03083  Polycomb repressive complex
rtem04110  Cell cycle
rtem04330  Notch signaling pathway
rtem04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120937226 (HDAC2)
   03083 Polycomb repressive complex
    120937226 (HDAC2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    120937226 (HDAC2)
   04350 TGF-beta signaling pathway
    120937226 (HDAC2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    120937226 (HDAC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rtem03036]
    120937226 (HDAC2)
Enzymes [BR:rtem01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     120937226 (HDAC2)
Chromosome and associated proteins [BR:rtem03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     120937226 (HDAC2)
   HDAC complexes
    Sin3A-HDAC complex
     120937226 (HDAC2)
    BRAF-HDAC complex
     120937226 (HDAC2)
    REST complex
     120937226 (HDAC2)
    SHIP complex
     120937226 (HDAC2)
    MiDAC complex
     120937226 (HDAC2)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     120937226 (HDAC2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    120937226 (HDAC2)
  Chromatin remodeling factors
   NuRD complex
    120937226 (HDAC2)
SSDB
Motif
Pfam: Hist_deacetyl RNA_polI_A34
Other DBs
NCBI-GeneID: 120937226
NCBI-ProteinID: XP_040206198
LinkDB
Position
4:complement(268982508..269036630)
AA seq 488 aa
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAIQEDSGDEEAEDPDKRISIRASDKRIACEEE
FSDSEDEGEGGRRNVADHKKGKKKARLEEDKKENDDKKSDVKEEDKSKDNTVEKMDTKGV
KSDQPSNP
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgtacagtcaggggggcggcaagaagaaggtctgctactactatgatggtgacatt
gggaactactactatggacaaggacaccctatgaagcctcataggatacgaatgacccac
aacttacttttgaactatggactctacagaaagatggaaatatatcgccctcacaaggcc
acagcagaagagatgaccaagtatcacagtgatgaatacatcaagtttcttcgatcgata
agaccagacaatatgtctgaatacagcaaacaaatgcaaagattcaacgttggtgaggac
tgtccggtgtttgatggcctttttgagttctgccagctttccactggaggctctgtggct
ggtgctgtaaaactgaacagacagcaaactgacatggcagtaaactgggcaggaggactt
catcatgcaaagaaatctgaagcatctgggttttgttatgtgaatgacattgtacttgcc
atccttgaactcttaaaataccaccaaagagtgttatacattgacatagatattcaccat
ggtgatggtgttgaagaggctttctataccacagatcgggtcatgaccgtttcattccat
aaatatggggaatatttccctggcaccggtgatctcagagatattggtgctggaaaaggc
aagtattatgctgtcaatttcccaatgagggatggaattgatgatgaatcatacggacaa
atatttaagccaatcatttccaaagtaatggagatgtaccagcccagtgcagtggtttta
cagtgtggtgccgattcattgtctggagatcgccttgggtgcttcaatttaacagtaaag
ggtcatgctaagtgtgttgaagttgtaaaaacttttaacttgcctctactcatgctcggt
ggaggtggatatactattcgtaatgttgctcgctgctggacatatgagactgctgttgcc
ctggattgtgaaatcccaaatgagctaccatacaatgattactttgaatattttgggcca
gatttcaagcttcatattagcccttccaacatgaccaatcaaaatacaccagagtacatg
gagaaaataaagcagcgcttatttgagaatctgcgtatgcttccccatgcaccgggtgta
cagatgcaggctataccagaagatgccattcaggaggacagtggagatgaagaagcggag
gacccagataagcgtatttctatacgagcttctgacaagcggatagcctgcgaagaagag
ttttcagactctgaggatgaaggtgaagggggaagacgtaatgttgctgatcataaaaag
ggaaaaaaaaaagcgagacttgaagaggataagaaggaaaatgacgacaagaaatcggat
gtgaaagaagaagataaatctaaagacaatactgtggagaaaatggacactaaaggtgtc
aagtcagatcagccaagtaatccctga

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