Rana temporaria (common frog): 120937346
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Entry
120937346 CDS
T07929
Name
(RefSeq) vacuolar protein 8-like
KO
K08332
vacuolar protein 8
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120937346
03029 Mitochondrial biogenesis [BR:
rtem03029
]
120937346
Membrane trafficking [BR:
rtem04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
120937346
Other autophagy associated proteins
Micronucleophagy
120937346
Mitochondrial biogenesis [BR:
rtem03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120937346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT
HEAT_2
V-ATPase_H_N
DUF383
Arm_2
U3snoRNP10
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
120937346
NCBI-ProteinID:
XP_040206427
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All DBs
Position
4:297090047..297158202
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AA seq
578 aa
AA seq
DB search
MGRLCERCAQLFQDFVNFVRRLSSRIVEHMKECMAMLRECCCLKPKGTSVRELYQPVLQN
HEKQAAQEFLNHMETGLNESPVGKETLDALMILAFSENADLQHSAALYYLHMSQHMNTQL
PAEFLEPYQPLLQSADLEVQQMSSLSLVNFLLEGNLNKELVVQVGLLEPILELLESGDPA
VQCNSCACIMTLAISETNREAIGIAGGILPLLTLAKSYDPRVQQNAVGAILNLTRSERIK
SILCREGALPVLTLLLQSADSEIQYYSCASLGNIAANPEHHKAMLAIGDKFLLRMLVSLM
SSSVQKVSSQACLCLNNLASSGEVQTHLLAMDIMPLVLYLLNSSSRDVRQASITLLCTMS
HSPGIMDVLCEEMLQHLAMLMQTERANPVVVIHAACTIQNLCQAENIEVIVQSQCFEELL
LALLDPNNEEESLQYLASCIADLTKHDYARENLVKRKDKAFLKCLVKFSGYLEHKELSFQ
AATVIKHLSHSGRIAPYLKPLMKDVEDYLMSFLSHPEMKFQQMGIATLCLLSEDAEFSMA
ISQSPLKEQLEQVRQQTEETQTLLRLAISHTDSLSLNE
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcctgtgtgagagatgcgctcagctcttccaggactttgtgaactttgtgagg
agactctcatccaggatagtggagcacatgaaggagtgtatggccatgctcagagaatgc
tgctgcctcaaacctaagggcacctcagtcagggagctgtaccagcctgtgctgcagaac
catgagaagcaggcagcccaggagttcctcaatcatatggagacaggtttaaacgagtcc
ccggtaggaaaagaaaccctggatgctttgatgatcttggccttttcagaaaatgctgac
ctacaacattctgctgccctttactatttgcatatgagccagcatatgaatacacagctg
cctgcagagttcctggagccatatcagcctttgctacagtctgctgacctggaggtccaa
cagatgtcttccttgtctcttgtgaattttcttcttgaaggaaacttgaataaggagctt
gttgtccaagtgggattgcttgagccaatactcgagctgctggagtcgggagatcctgct
gtacagtgtaactcctgtgcatgcatcatgactttggccatctctgaaacaaatcgagaa
gcaattggtattgctggagggatccttcctcttctgacattggcaaagtcttatgatcct
agagtccagcagaatgctgttggggctattctgaacttgactcgatcagagcgcattaaa
agtatattgtgtcgagaaggagctcttccagtcctgactctgcttctgcagtcagctgat
tcagaaatccagtactatagctgtgcctcattgggtaacattgctgctaatccagagcat
cataaagccatgctagccattggtgacaaattcctactccggatgctggtgtctctgatg
tcttcctctgtgcagaaggtctcaagtcaggcgtgtctttgtttaaataacctagcttca
agtggggaggttcaaactcacctcctagctatggacatcatgcctctcgtcctttacttg
ctcaactctagcagtagagatgtccggcaagcttccattactcttctctgcaccatgtct
cattcacctggaatcatggatgtgttgtgcgaagaaatgcttcagcatttagccatgttg
atgcagacggagagggcaaaccctgtggttgtgatccatgcggcttgcacaatccagaat
ctgtgccaagcagaaaacatcgaggtcattgtacaaagtcagtgctttgaggaattactt
ctggcccttttggatcctaataatgaagaggaatctctgcagtatttggcatcatgcatt
gcggacctaactaaacatgactatgcaagggagaatctcgttaaaaggaaggataaagct
ttcctcaagtgtttggtgaaattttctggatacctagaacataaagaactctccttccaa
gctgccacagttattaaacatctgtctcattctgggagaattgctccatatttaaaacct
ttaatgaaggatgttgaagactacctcatgagttttctcagtcacccagagatgaagttc
cagcagatgggaattgccaccctgtgcttgttaagtgaagatgcagagttttcaatggcg
atcagtcaaagtccactgaaggaacagcttgagcaagtgcggcagcaaacagaggagact
cagactttgctccgattggccatcagtcacacagacagtttaagcttaaatgaatga
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